RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 KRTAP9-2Q9BYQ4 174 aa4.84□□□□□ -1.64
CDK5RAP3-237ENST00000585163 KRTAP19-6Q3LI70 58 aa4.78□□□□□ -1.64
CDK5RAP3-237ENST00000585163 LCE2DQ5TA82 110 aaPredicted RBP4.77□□□□□ -1.65
CDK5RAP3-237ENST00000585163 KRTAP4-3Q9BYR4 195 aa4.61□□□□□ -1.67
CDK5RAP3-237ENST00000585163 LOC100996750A0A140TA64 210 aa4.61□□□□□ -1.67
CDK5RAP3-237ENST00000585163 CRCT1Q9UGL9 99 aa4.6□□□□□ -1.67
CDK5RAP3-237ENST00000585163 FCGBPQ9Y6R7 5405 aaPredicted RBP4.59□□□□□ -1.68
CDK5RAP3-237ENST00000585163 MT1MQ8N339 61 aa4.57□□□□□ -1.68
CDK5RAP3-237ENST00000585163 KRTAP19-3Q7Z4W3 81 aa4.57□□□□□ -1.68
CDK5RAP3-237ENST00000585163 MT1GP13640 62 aa4.56□□□□□ -1.68
CDK5RAP3-237ENST00000585163 MUC12Q9UKN1 5478 aa4.53□□□□□ -1.68
CDK5RAP3-237ENST00000585163 KRTAP9-6A0A140TA67 174 aa4.53□□□□□ -1.68
CDK5RAP3-237ENST00000585163 KRTAP2-2Q9BYT5 123 aa4.42□□□□□ -1.7
CDK5RAP3-237ENST00000585163 LCE5AQ5TCM9 118 aa4.42□□□□□ -1.7
CDK5RAP3-237ENST00000585163 MACF1Q9UPN3 7388 aaKnown RBP4.41□□□□□ -1.7
CDK5RAP3-237ENST00000585163 SYNE2Q8WXH0 6885 aaKnown RBP4.36□□□□□ -1.71
CDK5RAP3-237ENST00000585163 SPRR2FQ96RM1 72 aa4.36□□□□□ -1.71
CDK5RAP3-237ENST00000585163 DSTQ03001 7570 aaKnown RBP4.35□□□□□ -1.71
CDK5RAP3-237ENST00000585163 KRTAP12-4P60329 112 aa4.32□□□□□ -1.72
CDK5RAP3-237ENST00000585163 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.28□□□□□ -1.72
CDK5RAP3-237ENST00000585163 LCE3BQ5TA77 95 aa4.23□□□□□ -1.73
CDK5RAP3-237ENST00000585163 KRTAP6-3Q3LI67 103 aa4.18□□□□□ -1.74
CDK5RAP3-237ENST00000585163 MT1AP04731 61 aa4.16□□□□□ -1.74
CDK5RAP3-237ENST00000585163 LCE1AQ5T7P2 110 aa4.16□□□□□ -1.74
CDK5RAP3-237ENST00000585163 KRTAP6-1Q3LI64 71 aa4.16□□□□□ -1.74
CDK5RAP3-237ENST00000585163 KRTAP4-9Q9BYQ8 210 aa4.14□□□□□ -1.75
CDK5RAP3-237ENST00000585163 KRTAP9-7A8MTY7 169 aa4.13□□□□□ -1.75
CDK5RAP3-237ENST00000585163 MDN1Q9NU22 5596 aa4.1□□□□□ -1.75
CDK5RAP3-237ENST00000585163 SYNE1Q8NF91 8797 aaKnown RBP4.09□□□□□ -1.76
CDK5RAP3-237ENST00000585163 KRTAP5-9P26371 169 aa4.05□□□□□ -1.76
CDK5RAP3-237ENST00000585163 KRTAP5-5Q701N2 237 aaPredicted RBP4.05□□□□□ -1.76
CDK5RAP3-237ENST00000585163 LCE3DQ9BYE3 92 aa4.02□□□□□ -1.77
CDK5RAP3-237ENST00000585163 LCE3EQ5T5B0 92 aa3.98□□□□□ -1.77
CDK5RAP3-237ENST00000585163 LCE1EQ5T753 118 aa3.97□□□□□ -1.77
CDK5RAP3-237ENST00000585163 SPRR2EP22531 72 aa3.94□□□□□ -1.78
CDK5RAP3-237ENST00000585163 SPRR2BP35325 72 aa3.94□□□□□ -1.78
CDK5RAP3-237ENST00000585163 SPRR2AP35326 72 aa3.94□□□□□ -1.78
CDK5RAP3-237ENST00000585163 NEBP20929 6669 aa3.89□□□□□ -1.79
CDK5RAP3-237ENST00000585163 KRTAP9-4Q9BYQ2 154 aa3.88□□□□□ -1.79
CDK5RAP3-237ENST00000585163 PRM1P04553 51 aa3.81□□□□□ -1.8
CDK5RAP3-237ENST00000585163 LCE1DQ5T752 114 aa3.81□□□□□ -1.8
CDK5RAP3-237ENST00000585163 SPRR2DP22532 72 aa3.77□□□□□ -1.81
CDK5RAP3-237ENST00000585163 KRTAP6-2Q3LI66 62 aa3.72□□□□□ -1.81
CDK5RAP3-237ENST00000585163 LCE1FQ5T754 118 aa3.71□□□□□ -1.82
CDK5RAP3-237ENST00000585163 MT3P25713 68 aa3.7□□□□□ -1.82
CDK5RAP3-237ENST00000585163 KRTAP20-1Q3LI63 56 aa3.61□□□□□ -1.83
CDK5RAP3-237ENST00000585163 OBSCNQ5VST9 7968 aa3.59□□□□□ -1.84
CDK5RAP3-237ENST00000585163 KRTAP5-4Q6L8H1 288 aa3.53□□□□□ -1.84
CDK5RAP3-237ENST00000585163 KRTAP4-6Q9BYQ5 205 aa3.37□□□□□ -1.87
CDK5RAP3-237ENST00000585163 KRTAP5-2Q701N4 177 aa3.32□□□□□ -1.88
CDK5RAP3-237ENST00000585163 MT4P47944 62 aa3.31□□□□□ -1.88
CDK5RAP3-237ENST00000585163 KRTAP20-2Q3LI61 65 aa3.3□□□□□ -1.88
CDK5RAP3-237ENST00000585163 HMCN1Q96RW7 5635 aa3.3□□□□□ -1.88
CDK5RAP3-237ENST00000585163 LCE4AQ5TA78 99 aa3.28□□□□□ -1.88
CDK5RAP3-237ENST00000585163 KRTAP5-3Q6L8H2 238 aa3.15□□□□□ -1.91
CDK5RAP3-237ENST00000585163 MUC5ACP98088 5654 aa3.12□□□□□ -1.91
CDK5RAP3-237ENST00000585163 AHNAK2Q8IVF2 5795 aa2.99□□□□□ -1.93
CDK5RAP3-237ENST00000585163 KRTAP5-10Q6L8G5 202 aa2.95□□□□□ -1.94
CDK5RAP3-237ENST00000585163 LCE1BQ5T7P3 118 aa2.94□□□□□ -1.94
CDK5RAP3-237ENST00000585163 KRTAP5-1Q6L8H4 278 aa2.92□□□□□ -1.94
CDK5RAP3-237ENST00000585163 GPR98Q8WXG9 6306 aa2.9□□□□□ -1.95
CDK5RAP3-237ENST00000585163 KRTAP9-9Q9BYP9 154 aa2.89□□□□□ -1.95
CDK5RAP3-237ENST00000585163 KRTAP4-2Q9BYR5 136 aa2.86□□□□□ -1.95
CDK5RAP3-237ENST00000585163 LCE1CQ5T751 118 aa2.86□□□□□ -1.95
CDK5RAP3-237ENST00000585163 KRTAP4-11Q9BYQ6 195 aa2.86□□□□□ -1.95
CDK5RAP3-237ENST00000585163 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.72□□□□□ -1.97
CDK5RAP3-237ENST00000585163 KRTAP21-2Q3LI59 83 aa2.7□□□□□ -1.98
CDK5RAP3-237ENST00000585163 KRTAP5-8O75690 187 aa2.66□□□□□ -1.98
CDK5RAP3-237ENST00000585163 MUC19Q7Z5P9 8384 aa2.63□□□□□ -1.99
CDK5RAP3-237ENST00000585163 KRTAP5-7Q6L8G8 165 aa2.62□□□□□ -1.99
CDK5RAP3-237ENST00000585163 KRTAP21-1Q3LI58 79 aa2.49□□□□□ -2.01
CDK5RAP3-237ENST00000585163 MUC5BQ9HC84 5762 aaPredicted RBP2.46□□□□□ -2.02
CDK5RAP3-237ENST00000585163 KRTAP5-11Q6L8G4 156 aa2.45□□□□□ -2.02
CDK5RAP3-237ENST00000585163 KRTAP4-4Q9BYR3 166 aa2.42□□□□□ -2.02
CDK5RAP3-237ENST00000585163 AHNAKQ09666 5890 aaKnown RBP2.31□□□□□ -2.04
CDK5RAP3-237ENST00000585163 KRTAP4-12Q9BQ66 201 aa2.27□□□□□ -2.05
CDK5RAP3-237ENST00000585163 PHGR1C9JFL3 82 aa2.12□□□□□ -2.07
CDK5RAP3-237ENST00000585163 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 82.2 ms