RNA–Protein interactions for RNA: ENST00000584337.5

CDH8-211, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-211ENST00000584337 MT1LQ93083 61 aa3.27□□□□□ -1.89
CDH8-211ENST00000584337 FCGBPQ9Y6R7 5405 aaPredicted RBP3.27□□□□□ -1.89
CDH8-211ENST00000584337 MT1GP13640 62 aa3.27□□□□□ -1.89
CDH8-211ENST00000584337 USH2AO75445 5202 aa3.25□□□□□ -1.89
CDH8-211ENST00000584337 KRTAP19-7Q3SYF9 63 aa3.23□□□□□ -1.89
CDH8-211ENST00000584337 PRM1P04553 51 aa3.21□□□□□ -1.9
CDH8-211ENST00000584337 LCE3BQ5TA77 95 aa3.21□□□□□ -1.9
CDH8-211ENST00000584337 MT1EP04732 61 aa3.18□□□□□ -1.9
CDH8-211ENST00000584337 LOC100996750A0A140TA64 210 aa3.17□□□□□ -1.9
CDH8-211ENST00000584337 LCE3EQ5T5B0 92 aa3.16□□□□□ -1.9
CDH8-211ENST00000584337 SPRR2EP22531 72 aa3.16□□□□□ -1.9
CDH8-211ENST00000584337 SPRR2BP35325 72 aa3.16□□□□□ -1.9
CDH8-211ENST00000584337 SPRR2AP35326 72 aa3.16□□□□□ -1.9
CDH8-211ENST00000584337 LCE3DQ9BYE3 92 aa3.16□□□□□ -1.9
CDH8-211ENST00000584337 SSPOA2VEC9 5147 aa3.14□□□□□ -1.91
CDH8-211ENST00000584337 KMT2DO14686 5537 aa3.13□□□□□ -1.91
CDH8-211ENST00000584337 SYNE2Q8WXH0 6885 aaKnown RBP3.11□□□□□ -1.91
CDH8-211ENST00000584337 KRTAP4-3Q9BYR4 195 aa3.11□□□□□ -1.91
CDH8-211ENST00000584337 KRTAP4-9Q9BYQ8 210 aa3.07□□□□□ -1.92
CDH8-211ENST00000584337 KRTAP9-7A8MTY7 169 aa3.05□□□□□ -1.92
CDH8-211ENST00000584337 KRTAP9-2Q9BYQ4 174 aa3.05□□□□□ -1.92
CDH8-211ENST00000584337 KRTAP19-3Q7Z4W3 81 aa3.03□□□□□ -1.92
CDH8-211ENST00000584337 SPRR2DP22532 72 aa3.02□□□□□ -1.93
CDH8-211ENST00000584337 KRTAP9-6A0A140TA67 174 aa3.01□□□□□ -1.93
CDH8-211ENST00000584337 LCE1AQ5T7P2 110 aa3□□□□□ -1.93
CDH8-211ENST00000584337 MACF1Q9UPN3 7388 aaKnown RBP2.98□□□□□ -1.93
CDH8-211ENST00000584337 KRTAP6-3Q3LI67 103 aa2.98□□□□□ -1.93
CDH8-211ENST00000584337 MT1AP04731 61 aa2.98□□□□□ -1.93
CDH8-211ENST00000584337 MT1MQ8N339 61 aa2.97□□□□□ -1.93
CDH8-211ENST00000584337 MUC12Q9UKN1 5478 aa2.95□□□□□ -1.94
CDH8-211ENST00000584337 KRTAP19-6Q3LI70 58 aa2.94□□□□□ -1.94
CDH8-211ENST00000584337 KRTAP2-2Q9BYT5 123 aa2.94□□□□□ -1.94
CDH8-211ENST00000584337 LCE4AQ5TA78 99 aa2.91□□□□□ -1.94
CDH8-211ENST00000584337 KRTAP6-2Q3LI66 62 aa2.88□□□□□ -1.95
CDH8-211ENST00000584337 KRTAP9-9Q9BYP9 154 aa2.86□□□□□ -1.95
CDH8-211ENST00000584337 KRTAP9-4Q9BYQ2 154 aa2.86□□□□□ -1.95
CDH8-211ENST00000584337 KRTAP5-5Q701N2 237 aaPredicted RBP2.85□□□□□ -1.95
CDH8-211ENST00000584337 LCE1EQ5T753 118 aa2.83□□□□□ -1.96
CDH8-211ENST00000584337 MT4P47944 62 aa2.82□□□□□ -1.96
CDH8-211ENST00000584337 KRTAP6-1Q3LI64 71 aa2.78□□□□□ -1.96
CDH8-211ENST00000584337 KRTAP4-6Q9BYQ5 205 aa2.73□□□□□ -1.97
CDH8-211ENST00000584337 MDN1Q9NU22 5596 aa2.7□□□□□ -1.98
CDH8-211ENST00000584337 MUC19Q7Z5P9 8384 aa2.69□□□□□ -1.98
CDH8-211ENST00000584337 LCE1DQ5T752 114 aa2.68□□□□□ -1.98
CDH8-211ENST00000584337 MT3P25713 68 aa2.67□□□□□ -1.98
CDH8-211ENST00000584337 LCE1BQ5T7P3 118 aa2.64□□□□□ -1.99
CDH8-211ENST00000584337 LCE5AQ5TCM9 118 aa2.64□□□□□ -1.99
CDH8-211ENST00000584337 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.57□□□□□ -2
CDH8-211ENST00000584337 KRTAP4-12Q9BQ66 201 aa2.56□□□□□ -2
CDH8-211ENST00000584337 KRTAP5-9P26371 169 aa2.47□□□□□ -2.01
CDH8-211ENST00000584337 KRTAP20-1Q3LI63 56 aa2.39□□□□□ -2.03
CDH8-211ENST00000584337 LCE1FQ5T754 118 aa2.38□□□□□ -2.03
CDH8-211ENST00000584337 KRTAP4-11Q9BYQ6 195 aa2.37□□□□□ -2.03
CDH8-211ENST00000584337 NEBP20929 6669 aa2.36□□□□□ -2.03
CDH8-211ENST00000584337 MUC5ACP98088 5654 aa2.21□□□□□ -2.06
CDH8-211ENST00000584337 GPR98Q8WXG9 6306 aa2.21□□□□□ -2.06
CDH8-211ENST00000584337 HMCN1Q96RW7 5635 aa2.14□□□□□ -2.07
CDH8-211ENST00000584337 KRTAP5-4Q6L8H1 288 aa2.13□□□□□ -2.07
CDH8-211ENST00000584337 KRTAP20-2Q3LI61 65 aa2.13□□□□□ -2.07
CDH8-211ENST00000584337 LCE1CQ5T751 118 aa2.11□□□□□ -2.07
CDH8-211ENST00000584337 KRTAP4-2Q9BYR5 136 aa2.06□□□□□ -2.08
CDH8-211ENST00000584337 KRTAP5-3Q6L8H2 238 aa2.03□□□□□ -2.08
CDH8-211ENST00000584337 KRTAP4-4Q9BYR3 166 aa2.02□□□□□ -2.09
CDH8-211ENST00000584337 KRTAP5-10Q6L8G5 202 aa2.02□□□□□ -2.09
CDH8-211ENST00000584337 KRTAP5-2Q701N4 177 aa1.98□□□□□ -2.09
CDH8-211ENST00000584337 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.89□□□□□ -2.11
CDH8-211ENST00000584337 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
CDH8-211ENST00000584337 AHNAK2Q8IVF2 5795 aa1.88□□□□□ -2.11
CDH8-211ENST00000584337 KRTAP5-1Q6L8H4 278 aa1.8□□□□□ -2.12
CDH8-211ENST00000584337 KRTAP5-8O75690 187 aa1.67□□□□□ -2.14
CDH8-211ENST00000584337 MUC5BQ9HC84 5762 aaPredicted RBP1.67□□□□□ -2.14
CDH8-211ENST00000584337 KRTAP21-2Q3LI59 83 aa1.66□□□□□ -2.14
CDH8-211ENST00000584337 KRTAP5-7Q6L8G8 165 aa1.64□□□□□ -2.15
CDH8-211ENST00000584337 AHNAKQ09666 5890 aaKnown RBP1.59□□□□□ -2.16
CDH8-211ENST00000584337 KRTAP5-11Q6L8G4 156 aa1.57□□□□□ -2.16
CDH8-211ENST00000584337 PHGR1C9JFL3 82 aa1.3□□□□□ -2.2
CDH8-211ENST00000584337 MUC16Q8WXI7 14507 aa0.97□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 167.4 ms