RNA–Protein interactions for RNA: ENST00000583775.1

PRKCA-205, Transcript of protein kinase C alpha, humanhuman

TSL 3

Gene PRKCA, Length 321 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-205ENST00000583775 SPINT4Q6UDR6 99 aa2.75□□□□□ -1.97
PRKCA-205ENST00000583775 LINC01554Q52M75 96 aa2.73□□□□□ -1.97
PRKCA-205ENST00000583775 MT1HP80294 61 aa2.72□□□□□ -1.97
PRKCA-205ENST00000583775 MUC2Q02817 5179 aa2.71□□□□□ -1.98
PRKCA-205ENST00000583775 SPRR2GQ9BYE4 73 aa2.71□□□□□ -1.98
PRKCA-205ENST00000583775 RNF213Q63HN8 5207 aa2.7□□□□□ -1.98
PRKCA-205ENST00000583775 C10orf95Q9H7T3 257 aa2.66□□□□□ -1.98
PRKCA-205ENST00000583775 M0R2T5 61 aa2.65□□□□□ -1.99
PRKCA-205ENST00000583775 MT2AP02795 61 aa2.65□□□□□ -1.99
PRKCA-205ENST00000583775 UBR4Q5T4S7 5183 aa2.63□□□□□ -1.99
PRKCA-205ENST00000583775 MT1FP04733 61 aa2.63□□□□□ -1.99
PRKCA-205ENST00000583775 KRTAP19-8Q3LI54 63 aa2.63□□□□□ -1.99
PRKCA-205ENST00000583775 CAMK2N1Q7Z7J9 78 aa2.63□□□□□ -1.99
PRKCA-205ENST00000583775 FAT4Q6V0I7 4981 aa2.62□□□□□ -1.99
PRKCA-205ENST00000583775 KRTAP10-10P60014 251 aa2.61□□□□□ -1.99
PRKCA-205ENST00000583775 PP632Q6XCG6 107 aa2.61□□□□□ -1.99
PRKCA-205ENST00000583775 LCE3DQ9BYE3 92 aa2.61□□□□□ -1.99
PRKCA-205ENST00000583775 PLAC4Q8WY50 150 aa2.59□□□□□ -1.99
PRKCA-205ENST00000583775 TNP1P09430 55 aa2.56□□□□□ -2
PRKCA-205ENST00000583775 MUC19Q7Z5P9 8384 aa2.55□□□□□ -2
PRKCA-205ENST00000583775 MT1BP07438 61 aa2.54□□□□□ -2
PRKCA-205ENST00000583775 MT1XP80297 61 aa2.48□□□□□ -2.01
PRKCA-205ENST00000583775 PRO2289Q9P1D8 64 aa2.45□□□□□ -2.02
PRKCA-205ENST00000583775 KRTAP5-7Q6L8G8 165 aa2.44□□□□□ -2.02
PRKCA-205ENST00000583775 KRTAP8-1Q8IUC2 63 aa2.43□□□□□ -2.02
PRKCA-205ENST00000583775 SPRR5A0A1B0GTR4 108 aa2.39□□□□□ -2.03
PRKCA-205ENST00000583775 KRTAP12-3P60328 96 aa2.33□□□□□ -2.04
PRKCA-205ENST00000583775 KRTAP19-6Q3LI70 58 aa2.31□□□□□ -2.04
PRKCA-205ENST00000583775 USH2AO75445 5202 aa2.3□□□□□ -2.04
PRKCA-205ENST00000583775 LUZP6Q538Z0 58 aa2.3□□□□□ -2.04
PRKCA-205ENST00000583775 SSPOA2VEC9 5147 aa2.27□□□□□ -2.05
PRKCA-205ENST00000583775 KRTAP19-5Q3LI72 72 aa2.25□□□□□ -2.05
PRKCA-205ENST00000583775 KRTAP19-7Q3SYF9 63 aa2.22□□□□□ -2.05
PRKCA-205ENST00000583775 MT1EP04732 61 aa2.17□□□□□ -2.06
PRKCA-205ENST00000583775 KRTAP21-2Q3LI59 83 aa2.16□□□□□ -2.06
PRKCA-205ENST00000583775 MT1LQ93083 61 aa2.15□□□□□ -2.07
PRKCA-205ENST00000583775 FCGBPQ9Y6R7 5405 aaPredicted RBP2.11□□□□□ -2.07
PRKCA-205ENST00000583775 KMT2DO14686 5537 aa2.1□□□□□ -2.07
PRKCA-205ENST00000583775 MT1GP13640 62 aa2.07□□□□□ -2.08
PRKCA-205ENST00000583775 KRTAP19-3Q7Z4W3 81 aa2.06□□□□□ -2.08
PRKCA-205ENST00000583775 FSIP2Q5CZC0 6907 aa2.05□□□□□ -2.08
PRKCA-205ENST00000583775 MT1MQ8N339 61 aa2.03□□□□□ -2.08
PRKCA-205ENST00000583775 CRCT1Q9UGL9 99 aa2.02□□□□□ -2.09
PRKCA-205ENST00000583775 KRTAP2-3P0C7H8 128 aa2.01□□□□□ -2.09
PRKCA-205ENST00000583775 KRTAP2-4Q9BYR9 128 aa2.01□□□□□ -2.09
PRKCA-205ENST00000583775 KRTAP2-1Q9BYU5 128 aa2.01□□□□□ -2.09
PRKCA-205ENST00000583775 SPRR2FQ96RM1 72 aa1.99□□□□□ -2.09
PRKCA-205ENST00000583775 INE1O15225 51 aa1.98□□□□□ -2.09
PRKCA-205ENST00000583775 MUC12Q9UKN1 5478 aa1.95□□□□□ -2.1
PRKCA-205ENST00000583775 MACF1Q9UPN3 7388 aaKnown RBP1.91□□□□□ -2.1
PRKCA-205ENST00000583775 KRTAP6-3Q3LI67 103 aa1.9□□□□□ -2.11
PRKCA-205ENST00000583775 SPRR2EP22531 72 aa1.86□□□□□ -2.11
PRKCA-205ENST00000583775 SPRR2BP35325 72 aa1.86□□□□□ -2.11
PRKCA-205ENST00000583775 SPRR2AP35326 72 aa1.86□□□□□ -2.11
PRKCA-205ENST00000583775 MT1AP04731 61 aa1.84□□□□□ -2.11
PRKCA-205ENST00000583775 KRTAP12-4P60329 112 aa1.84□□□□□ -2.11
PRKCA-205ENST00000583775 MDN1Q9NU22 5596 aa1.82□□□□□ -2.12
PRKCA-205ENST00000583775 SYNE2Q8WXH0 6885 aaKnown RBP1.81□□□□□ -2.12
PRKCA-205ENST00000583775 SPRR2DP22532 72 aa1.79□□□□□ -2.12
PRKCA-205ENST00000583775 KRTAP6-1Q3LI64 71 aa1.78□□□□□ -2.12
PRKCA-205ENST00000583775 DSTQ03001 7570 aaKnown RBP1.74□□□□□ -2.13
PRKCA-205ENST00000583775 NEBP20929 6669 aa1.67□□□□□ -2.14
PRKCA-205ENST00000583775 HMCN1Q96RW7 5635 aa1.66□□□□□ -2.14
PRKCA-205ENST00000583775 KRTAP6-2Q3LI66 62 aa1.62□□□□□ -2.15
PRKCA-205ENST00000583775 SYNE1Q8NF91 8797 aaKnown RBP1.59□□□□□ -2.16
PRKCA-205ENST00000583775 KRTAP20-2Q3LI61 65 aa1.57□□□□□ -2.16
PRKCA-205ENST00000583775 KRTAP20-1Q3LI63 56 aa1.56□□□□□ -2.16
PRKCA-205ENST00000583775 MT4P47944 62 aa1.51□□□□□ -2.17
PRKCA-205ENST00000583775 PRM1P04553 51 aa1.45□□□□□ -2.18
PRKCA-205ENST00000583775 KRTAP5-10Q6L8G5 202 aa1.36□□□□□ -2.19
PRKCA-205ENST00000583775 MUC5ACP98088 5654 aa1.32□□□□□ -2.2
PRKCA-205ENST00000583775 AHNAK2Q8IVF2 5795 aa1.27□□□□□ -2.21
PRKCA-205ENST00000583775 MUC5BQ9HC84 5762 aaPredicted RBP1.09□□□□□ -2.23
PRKCA-205ENST00000583775 GPR98Q8WXG9 6306 aa1.07□□□□□ -2.24
PRKCA-205ENST00000583775 PHGR1C9JFL3 82 aa1□□□□□ -2.25
PRKCA-205ENST00000583775 MUC16Q8WXI7 14507 aa1□□□□□ -2.25
PRKCA-205ENST00000583775 KRTAP21-1Q3LI58 79 aa0.96□□□□□ -2.26
PRKCA-205ENST00000583775 AHNAKQ09666 5890 aaKnown RBP0.91□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 16.2 ms