RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 KRTAP8-1Q8IUC2 63 aa6.26□□□□□ -1.41
CDK5RAP3-228ENST00000583363 LCE3AQ5TA76 89 aa6.22□□□□□ -1.41
CDK5RAP3-228ENST00000583363 KRTAP23-1A1A580 65 aa6.19□□□□□ -1.42
CDK5RAP3-228ENST00000583363 KTN1-AS1Q86SY8 53 aa6.18□□□□□ -1.42
CDK5RAP3-228ENST00000583363 SPRR2DP22532 72 aa6.17□□□□□ -1.42
CDK5RAP3-228ENST00000583363 KRTAP19-7Q3SYF9 63 aa6.1□□□□□ -1.43
CDK5RAP3-228ENST00000583363 KRTAP19-5Q3LI72 72 aa6.09□□□□□ -1.43
CDK5RAP3-228ENST00000583363 PP632Q6XCG6 107 aa6.07□□□□□ -1.44
CDK5RAP3-228ENST00000583363 LCE3BQ5TA77 95 aa6.04□□□□□ -1.44
CDK5RAP3-228ENST00000583363 PRAC1Q96KF2 57 aa6.04□□□□□ -1.44
CDK5RAP3-228ENST00000583363 MT1EP04732 61 aa6.01□□□□□ -1.45
CDK5RAP3-228ENST00000583363 KRTAP12-3P60328 96 aa5.99□□□□□ -1.45
CDK5RAP3-228ENST00000583363 GPR98Q8WXG9 6306 aa5.95□□□□□ -1.46
CDK5RAP3-228ENST00000583363 DSTQ03001 7570 aaKnown RBP5.87□□□□□ -1.47
CDK5RAP3-228ENST00000583363 MT1LQ93083 61 aa5.84□□□□□ -1.47
CDK5RAP3-228ENST00000583363 KRTAP19-3Q7Z4W3 81 aa5.83□□□□□ -1.48
CDK5RAP3-228ENST00000583363 KRTAP15-1Q3LI76 137 aa5.81□□□□□ -1.48
CDK5RAP3-228ENST00000583363 LCE5AQ5TCM9 118 aa5.78□□□□□ -1.48
CDK5RAP3-228ENST00000583363 MT1GP13640 62 aa5.77□□□□□ -1.49
CDK5RAP3-228ENST00000583363 KRTAP4-9Q9BYQ8 210 aa5.74□□□□□ -1.49
CDK5RAP3-228ENST00000583363 KRTAP19-4Q3LI73 84 aa5.7□□□□□ -1.5
CDK5RAP3-228ENST00000583363 MT1MQ8N339 61 aa5.67□□□□□ -1.5
CDK5RAP3-228ENST00000583363 KRTAP4-7Q9BYR0 210 aa5.6□□□□□ -1.51
CDK5RAP3-228ENST00000583363 LCE3CQ5T5A8 94 aa5.59□□□□□ -1.51
CDK5RAP3-228ENST00000583363 LCE1DQ5T752 114 aa5.56□□□□□ -1.52
CDK5RAP3-228ENST00000583363 KRTAP4-3Q9BYR4 195 aa5.54□□□□□ -1.52
CDK5RAP3-228ENST00000583363 HMCN1Q96RW7 5635 aa5.48□□□□□ -1.53
CDK5RAP3-228ENST00000583363 AHNAK2Q8IVF2 5795 aa5.44□□□□□ -1.54
CDK5RAP3-228ENST00000583363 MT4P47944 62 aa5.44□□□□□ -1.54
CDK5RAP3-228ENST00000583363 LCE4AQ5TA78 99 aa5.42□□□□□ -1.54
CDK5RAP3-228ENST00000583363 KRTAP5-10Q6L8G5 202 aa5.36□□□□□ -1.55
CDK5RAP3-228ENST00000583363 SPRR5A0A1B0GTR4 108 aa5.29□□□□□ -1.56
CDK5RAP3-228ENST00000583363 KRTAP5-4Q6L8H1 288 aa5.28□□□□□ -1.56
CDK5RAP3-228ENST00000583363 LOC100996750A0A140TA64 210 aa5.27□□□□□ -1.57
CDK5RAP3-228ENST00000583363 KRTAP9-6A8MVA2 160 aa5.26□□□□□ -1.57
CDK5RAP3-228ENST00000583363 KRTAP4-6Q9BYQ5 205 aa5.26□□□□□ -1.57
CDK5RAP3-228ENST00000583363 KRTAP5-7Q6L8G8 165 aa5.19□□□□□ -1.58
CDK5RAP3-228ENST00000583363 KRTAP5-5Q701N2 237 aaPredicted RBP5.15□□□□□ -1.59
CDK5RAP3-228ENST00000583363 KRTAP5-3Q6L8H2 238 aa5.14□□□□□ -1.59
CDK5RAP3-228ENST00000583363 KRTAP20-2Q3LI61 65 aa5□□□□□ -1.61
CDK5RAP3-228ENST00000583363 MT1AP04731 61 aa4.97□□□□□ -1.61
CDK5RAP3-228ENST00000583363 LUZP6Q538Z0 58 aa4.95□□□□□ -1.62
CDK5RAP3-228ENST00000583363 KRTAP6-1Q3LI64 71 aa4.92□□□□□ -1.62
CDK5RAP3-228ENST00000583363 SYNE1Q8NF91 8797 aaKnown RBP4.88□□□□□ -1.63
CDK5RAP3-228ENST00000583363 KRTAP12-4P60329 112 aa4.86□□□□□ -1.63
CDK5RAP3-228ENST00000583363 KRTAP9-4Q9BYQ2 154 aa4.77□□□□□ -1.65
CDK5RAP3-228ENST00000583363 NDUFAF8A1L188 74 aa4.72□□□□□ -1.65
CDK5RAP3-228ENST00000583363 KRTAP4-11Q9BYQ6 195 aa4.65□□□□□ -1.67
CDK5RAP3-228ENST00000583363 KRTAP6-2Q3LI66 62 aa4.58□□□□□ -1.68
CDK5RAP3-228ENST00000583363 KRTAP5-2Q701N4 177 aa4.56□□□□□ -1.68
CDK5RAP3-228ENST00000583363 AHNAKQ09666 5890 aaKnown RBP4.55□□□□□ -1.68
CDK5RAP3-228ENST00000583363 MUC5ACP98088 5654 aa4.54□□□□□ -1.68
CDK5RAP3-228ENST00000583363 MT3P25713 68 aa4.53□□□□□ -1.68
CDK5RAP3-228ENST00000583363 KRTAP5-8O75690 187 aa4.52□□□□□ -1.69
CDK5RAP3-228ENST00000583363 MUC5BQ9HC84 5762 aaPredicted RBP4.5□□□□□ -1.69
CDK5RAP3-228ENST00000583363 OBSCNQ5VST9 7968 aa4.41□□□□□ -1.7
CDK5RAP3-228ENST00000583363 H3BS24 57 aa4.34□□□□□ -1.71
CDK5RAP3-228ENST00000583363 KRTAP9-9Q9BYP9 154 aa4.33□□□□□ -1.72
CDK5RAP3-228ENST00000583363 KRTAP5-1Q6L8H4 278 aa4.16□□□□□ -1.74
CDK5RAP3-228ENST00000583363 LCE3DQ9BYE3 92 aa4.14□□□□□ -1.75
CDK5RAP3-228ENST00000583363 A0A0A0MQY5 61 aa4.12□□□□□ -1.75
CDK5RAP3-228ENST00000583363 LCE1EQ5T753 118 aa4.02□□□□□ -1.77
CDK5RAP3-228ENST00000583363 LCE3EQ5T5B0 92 aa3.99□□□□□ -1.77
CDK5RAP3-228ENST00000583363 INE1O15225 51 aa3.94□□□□□ -1.78
CDK5RAP3-228ENST00000583363 KRTAP4-2Q9BYR5 136 aa3.74□□□□□ -1.81
CDK5RAP3-228ENST00000583363 LCE1CQ5T751 118 aa3.73□□□□□ -1.81
CDK5RAP3-228ENST00000583363 LCE1BQ5T7P3 118 aa3.73□□□□□ -1.81
CDK5RAP3-228ENST00000583363 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.47□□□□□ -1.85
CDK5RAP3-228ENST00000583363 KRTAP4-12Q9BQ66 201 aa3.47□□□□□ -1.85
CDK5RAP3-228ENST00000583363 PRM1P04553 51 aa3.32□□□□□ -1.88
CDK5RAP3-228ENST00000583363 KRTAP5-11Q6L8G4 156 aa3.31□□□□□ -1.88
CDK5RAP3-228ENST00000583363 KRTAP21-2Q3LI59 83 aa3.24□□□□□ -1.89
CDK5RAP3-228ENST00000583363 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
CDK5RAP3-228ENST00000583363 PHGR1C9JFL3 82 aa3.13□□□□□ -1.91
CDK5RAP3-228ENST00000583363 KRTAP4-4Q9BYR3 166 aa2.88□□□□□ -1.95
CDK5RAP3-228ENST00000583363 MUC19Q7Z5P9 8384 aa2.76□□□□□ -1.97
CDK5RAP3-228ENST00000583363 KRTAP21-1Q3LI58 79 aa2.36□□□□□ -2.03
CDK5RAP3-228ENST00000583363 MUC16Q8WXI7 14507 aa1.94□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 64.2 ms