RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 LOC100996750A0A140TA64 210 aa3.92□□□□□ -1.78
CDK5RAP3-227ENST00000583352 KRTAP4-6Q9BYQ5 205 aa3.92□□□□□ -1.78
CDK5RAP3-227ENST00000583352 LCE3BQ5TA77 95 aa3.9□□□□□ -1.79
CDK5RAP3-227ENST00000583352 KRTAP25-1Q3LHN0 102 aa3.89□□□□□ -1.79
CDK5RAP3-227ENST00000583352 KRTAP10-7P60409 375 aaPredicted RBP3.87□□□□□ -1.79
CDK5RAP3-227ENST00000583352 KRTAP10-12P60413 245 aa3.85□□□□□ -1.79
CDK5RAP3-227ENST00000583352 TNP1P09430 55 aa3.78□□□□□ -1.8
CDK5RAP3-227ENST00000583352 KRTAP23-1A1A580 65 aa3.75□□□□□ -1.81
CDK5RAP3-227ENST00000583352 PP632Q6XCG6 107 aa3.71□□□□□ -1.82
CDK5RAP3-227ENST00000583352 GPR98Q8WXG9 6306 aa3.7□□□□□ -1.82
CDK5RAP3-227ENST00000583352 KRTAP4-9Q9BYQ8 210 aa3.67□□□□□ -1.82
CDK5RAP3-227ENST00000583352 LCE5AQ5TCM9 118 aa3.65□□□□□ -1.83
CDK5RAP3-227ENST00000583352 KRTAP19-7Q3SYF9 63 aa3.63□□□□□ -1.83
CDK5RAP3-227ENST00000583352 LCE3AQ5TA76 89 aa3.63□□□□□ -1.83
CDK5RAP3-227ENST00000583352 KRTAP19-3Q7Z4W3 81 aa3.63□□□□□ -1.83
CDK5RAP3-227ENST00000583352 MT1EP04732 61 aa3.61□□□□□ -1.83
CDK5RAP3-227ENST00000583352 DSTQ03001 7570 aaKnown RBP3.59□□□□□ -1.83
CDK5RAP3-227ENST00000583352 LCE1DQ5T752 114 aa3.56□□□□□ -1.84
CDK5RAP3-227ENST00000583352 MT1GP13640 62 aa3.52□□□□□ -1.85
CDK5RAP3-227ENST00000583352 LCE4AQ5TA78 99 aa3.52□□□□□ -1.85
CDK5RAP3-227ENST00000583352 MT4P47944 62 aa3.51□□□□□ -1.85
CDK5RAP3-227ENST00000583352 KRTAP19-5Q3LI72 72 aa3.49□□□□□ -1.85
CDK5RAP3-227ENST00000583352 KRTAP15-1Q3LI76 137 aa3.49□□□□□ -1.85
CDK5RAP3-227ENST00000583352 KRTAP12-3P60328 96 aa3.48□□□□□ -1.85
CDK5RAP3-227ENST00000583352 MT1MQ8N339 61 aa3.46□□□□□ -1.86
CDK5RAP3-227ENST00000583352 HMCN1Q96RW7 5635 aa3.43□□□□□ -1.86
CDK5RAP3-227ENST00000583352 MT1LQ93083 61 aa3.42□□□□□ -1.86
CDK5RAP3-227ENST00000583352 KRTAP5-10Q6L8G5 202 aa3.4□□□□□ -1.87
CDK5RAP3-227ENST00000583352 KRTAP5-4Q6L8H1 288 aa3.4□□□□□ -1.87
CDK5RAP3-227ENST00000583352 AHNAK2Q8IVF2 5795 aa3.39□□□□□ -1.87
CDK5RAP3-227ENST00000583352 KRTAP4-12Q9BQ66 201 aa3.39□□□□□ -1.87
CDK5RAP3-227ENST00000583352 KRTAP4-3Q9BYR4 195 aa3.37□□□□□ -1.87
CDK5RAP3-227ENST00000583352 SPRR5A0A1B0GTR4 108 aa3.36□□□□□ -1.87
CDK5RAP3-227ENST00000583352 KRTAP9-9Q9BYP9 154 aa3.33□□□□□ -1.88
CDK5RAP3-227ENST00000583352 KRTAP9-4Q9BYQ2 154 aa3.33□□□□□ -1.88
CDK5RAP3-227ENST00000583352 KRTAP5-7Q6L8G8 165 aa3.31□□□□□ -1.88
CDK5RAP3-227ENST00000583352 KRTAP19-4Q3LI73 84 aa3.29□□□□□ -1.88
CDK5RAP3-227ENST00000583352 KRTAP5-3Q6L8H2 238 aa3.29□□□□□ -1.88
CDK5RAP3-227ENST00000583352 LCE3CQ5T5A8 94 aa3.28□□□□□ -1.88
CDK5RAP3-227ENST00000583352 KRTAP20-2Q3LI61 65 aa3.23□□□□□ -1.89
CDK5RAP3-227ENST00000583352 KRTAP4-7Q9BYR0 210 aa3.23□□□□□ -1.89
CDK5RAP3-227ENST00000583352 NDUFAF8A1L188 74 aa3.18□□□□□ -1.9
CDK5RAP3-227ENST00000583352 LUZP6Q538Z0 58 aa3.18□□□□□ -1.9
CDK5RAP3-227ENST00000583352 KRTAP12-4P60329 112 aa3.17□□□□□ -1.9
CDK5RAP3-227ENST00000583352 KRTAP5-5Q701N2 237 aaPredicted RBP3.17□□□□□ -1.9
CDK5RAP3-227ENST00000583352 KRTAP9-6A8MVA2 160 aa3.12□□□□□ -1.91
CDK5RAP3-227ENST00000583352 KRTAP4-2Q9BYR5 136 aa3.05□□□□□ -1.92
CDK5RAP3-227ENST00000583352 SYNE1Q8NF91 8797 aaKnown RBP3.01□□□□□ -1.93
CDK5RAP3-227ENST00000583352 KRTAP4-11Q9BYQ6 195 aa3□□□□□ -1.93
CDK5RAP3-227ENST00000583352 KRTAP5-2Q701N4 177 aa2.94□□□□□ -1.94
CDK5RAP3-227ENST00000583352 MT1AP04731 61 aa2.92□□□□□ -1.94
CDK5RAP3-227ENST00000583352 KRTAP6-1Q3LI64 71 aa2.9□□□□□ -1.95
CDK5RAP3-227ENST00000583352 KRTAP5-8O75690 187 aa2.89□□□□□ -1.95
CDK5RAP3-227ENST00000583352 AHNAKQ09666 5890 aaKnown RBP2.85□□□□□ -1.95
CDK5RAP3-227ENST00000583352 H3BS24 57 aa2.85□□□□□ -1.95
CDK5RAP3-227ENST00000583352 MUC5ACP98088 5654 aa2.82□□□□□ -1.96
CDK5RAP3-227ENST00000583352 KRTAP6-2Q3LI66 62 aa2.81□□□□□ -1.96
CDK5RAP3-227ENST00000583352 MUC5BQ9HC84 5762 aaPredicted RBP2.8□□□□□ -1.96
CDK5RAP3-227ENST00000583352 A0A0A0MQY5 61 aa2.77□□□□□ -1.97
CDK5RAP3-227ENST00000583352 MT3P25713 68 aa2.68□□□□□ -1.98
CDK5RAP3-227ENST00000583352 KRTAP5-1Q6L8H4 278 aa2.67□□□□□ -1.98
CDK5RAP3-227ENST00000583352 OBSCNQ5VST9 7968 aa2.66□□□□□ -1.98
CDK5RAP3-227ENST00000583352 INE1O15225 51 aa2.64□□□□□ -1.99
CDK5RAP3-227ENST00000583352 LCE1EQ5T753 118 aa2.5□□□□□ -2.01
CDK5RAP3-227ENST00000583352 LCE3DQ9BYE3 92 aa2.45□□□□□ -2.02
CDK5RAP3-227ENST00000583352 LCE3EQ5T5B0 92 aa2.4□□□□□ -2.03
CDK5RAP3-227ENST00000583352 LCE1BQ5T7P3 118 aa2.38□□□□□ -2.03
CDK5RAP3-227ENST00000583352 LCE1CQ5T751 118 aa2.31□□□□□ -2.04
CDK5RAP3-227ENST00000583352 KRTAP5-11Q6L8G4 156 aa2.12□□□□□ -2.07
CDK5RAP3-227ENST00000583352 PRM1P04553 51 aa2.11□□□□□ -2.07
CDK5RAP3-227ENST00000583352 LCE1FQ5T754 118 aa2.11□□□□□ -2.07
CDK5RAP3-227ENST00000583352 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.08□□□□□ -2.08
CDK5RAP3-227ENST00000583352 PHGR1C9JFL3 82 aa2□□□□□ -2.09
CDK5RAP3-227ENST00000583352 KRTAP21-2Q3LI59 83 aa1.9□□□□□ -2.11
CDK5RAP3-227ENST00000583352 KRTAP4-4Q9BYR3 166 aa1.78□□□□□ -2.12
CDK5RAP3-227ENST00000583352 MUC19Q7Z5P9 8384 aa1.66□□□□□ -2.14
CDK5RAP3-227ENST00000583352 KRTAP21-1Q3LI58 79 aa1.53□□□□□ -2.16
CDK5RAP3-227ENST00000583352 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 11.7 ms