RNA–Protein interactions for RNA: ENST00000583070.5

NUP85-220, Transcript of nucleoporin 85, humanhuman

TSL 5

Gene NUP85, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-220ENST00000583070 KRTAP25-1Q3LHN0 102 aa4□□□□□ -1.77
NUP85-220ENST00000583070 LCE3AQ5TA76 89 aa4□□□□□ -1.77
NUP85-220ENST00000583070 NEBP20929 6669 aa3.99□□□□□ -1.77
NUP85-220ENST00000583070 MT1EP04732 61 aa3.98□□□□□ -1.77
NUP85-220ENST00000583070 KRTAP19-5Q3LI72 72 aa3.97□□□□□ -1.77
NUP85-220ENST00000583070 KRTAP4-9Q9BYQ8 210 aa3.94□□□□□ -1.78
NUP85-220ENST00000583070 KRTAP4-2Q9BYR5 136 aa3.92□□□□□ -1.78
NUP85-220ENST00000583070 SPRR2DP22532 72 aa3.9□□□□□ -1.79
NUP85-220ENST00000583070 ROMO1P60602 79 aa3.9□□□□□ -1.79
NUP85-220ENST00000583070 KRTAP20-1Q3LI63 56 aa3.9□□□□□ -1.79
NUP85-220ENST00000583070 KRTAP19-3Q7Z4W3 81 aa3.9□□□□□ -1.79
NUP85-220ENST00000583070 LCE5AQ5TCM9 118 aa3.89□□□□□ -1.79
NUP85-220ENST00000583070 KRTAP23-1A1A580 65 aa3.88□□□□□ -1.79
NUP85-220ENST00000583070 KRTAP2-3P0C7H8 128 aa3.87□□□□□ -1.79
NUP85-220ENST00000583070 KRTAP2-4Q9BYR9 128 aa3.87□□□□□ -1.79
NUP85-220ENST00000583070 KRTAP12-3P60328 96 aa3.85□□□□□ -1.79
NUP85-220ENST00000583070 MT1LQ93083 61 aa3.85□□□□□ -1.79
NUP85-220ENST00000583070 MT1GP13640 62 aa3.84□□□□□ -1.79
NUP85-220ENST00000583070 BRK1Q8WUW1 75 aa3.83□□□□□ -1.8
NUP85-220ENST00000583070 PP632Q6XCG6 107 aa3.8□□□□□ -1.8
NUP85-220ENST00000583070 KRTAP4-11Q9BYQ6 195 aa3.78□□□□□ -1.8
NUP85-220ENST00000583070 MT1MQ8N339 61 aa3.77□□□□□ -1.81
NUP85-220ENST00000583070 KRTAP2-2Q9BYT5 123 aa3.76□□□□□ -1.81
NUP85-220ENST00000583070 KRTAP2-1Q9BYU5 128 aa3.76□□□□□ -1.81
NUP85-220ENST00000583070 KRTAP19-4Q3LI73 84 aa3.7□□□□□ -1.82
NUP85-220ENST00000583070 LCE4AQ5TA78 99 aa3.69□□□□□ -1.82
NUP85-220ENST00000583070 KRTAP15-1Q3LI76 137 aa3.68□□□□□ -1.82
NUP85-220ENST00000583070 DSTQ03001 7570 aaKnown RBP3.66□□□□□ -1.82
NUP85-220ENST00000583070 KRTAP4-3Q9BYR4 195 aa3.65□□□□□ -1.83
NUP85-220ENST00000583070 PMAIP1Q13794 54 aa3.62□□□□□ -1.83
NUP85-220ENST00000583070 KRTAP5-3Q6L8H2 238 aa3.62□□□□□ -1.83
NUP85-220ENST00000583070 A0A0A0MQY5 61 aa3.61□□□□□ -1.83
NUP85-220ENST00000583070 LCE3CQ5T5A8 94 aa3.58□□□□□ -1.84
NUP85-220ENST00000583070 PRO0628Q9UI54 55 aa3.57□□□□□ -1.84
NUP85-220ENST00000583070 KRTAP5-4Q6L8H1 288 aa3.48□□□□□ -1.85
NUP85-220ENST00000583070 KRTAP5-5Q701N2 237 aaPredicted RBP3.46□□□□□ -1.86
NUP85-220ENST00000583070 PRAC1Q96KF2 57 aa3.41□□□□□ -1.86
NUP85-220ENST00000583070 HMCN1Q96RW7 5635 aa3.38□□□□□ -1.87
NUP85-220ENST00000583070 KRTAP9-6A8MVA2 160 aa3.38□□□□□ -1.87
NUP85-220ENST00000583070 MT4P47944 62 aa3.37□□□□□ -1.87
NUP85-220ENST00000583070 KTN1-AS1Q86SY8 53 aa3.36□□□□□ -1.87
NUP85-220ENST00000583070 SPRR5A0A1B0GTR4 108 aa3.28□□□□□ -1.88
NUP85-220ENST00000583070 MT1AP04731 61 aa3.28□□□□□ -1.88
NUP85-220ENST00000583070 KRTAP12-4P60329 112 aa3.28□□□□□ -1.88
NUP85-220ENST00000583070 KRTAP20-2Q3LI61 65 aa3.25□□□□□ -1.89
NUP85-220ENST00000583070 KRTAP6-1Q3LI64 71 aa3.23□□□□□ -1.89
NUP85-220ENST00000583070 SYNE1Q8NF91 8797 aaKnown RBP3.18□□□□□ -1.9
NUP85-220ENST00000583070 AHNAK2Q8IVF2 5795 aa3.12□□□□□ -1.91
NUP85-220ENST00000583070 KRTAP5-2Q701N4 177 aa3.1□□□□□ -1.91
NUP85-220ENST00000583070 KRTAP5-10Q6L8G5 202 aa3.06□□□□□ -1.92
NUP85-220ENST00000583070 KRTAP6-2Q3LI66 62 aa3.04□□□□□ -1.92
NUP85-220ENST00000583070 GPR98Q8WXG9 6306 aa3.04□□□□□ -1.92
NUP85-220ENST00000583070 MT3P25713 68 aa2.98□□□□□ -1.93
NUP85-220ENST00000583070 KRTAP5-7Q6L8G8 165 aa2.92□□□□□ -1.94
NUP85-220ENST00000583070 LUZP6Q538Z0 58 aa2.85□□□□□ -1.95
NUP85-220ENST00000583070 KRTAP5-8O75690 187 aa2.81□□□□□ -1.96
NUP85-220ENST00000583070 OBSCNQ5VST9 7968 aa2.74□□□□□ -1.97
NUP85-220ENST00000583070 KRTAP5-1Q6L8H4 278 aa2.72□□□□□ -1.97
NUP85-220ENST00000583070 LCE1EQ5T753 118 aa2.71□□□□□ -1.98
NUP85-220ENST00000583070 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.68□□□□□ -1.98
NUP85-220ENST00000583070 MUC5ACP98088 5654 aa2.66□□□□□ -1.98
NUP85-220ENST00000583070 LCE3DQ9BYE3 92 aa2.62□□□□□ -1.99
NUP85-220ENST00000583070 MUC5BQ9HC84 5762 aaPredicted RBP2.58□□□□□ -2
NUP85-220ENST00000583070 NDUFAF8A1L188 74 aa2.57□□□□□ -2
NUP85-220ENST00000583070 KRTAP5-11Q6L8G4 156 aa2.54□□□□□ -2
NUP85-220ENST00000583070 LCE1CQ5T751 118 aa2.51□□□□□ -2.01
NUP85-220ENST00000583070 LCE1BQ5T7P3 118 aa2.51□□□□□ -2.01
NUP85-220ENST00000583070 LCE3EQ5T5B0 92 aa2.5□□□□□ -2.01
NUP85-220ENST00000583070 AHNAKQ09666 5890 aaKnown RBP2.48□□□□□ -2.01
NUP85-220ENST00000583070 LCE1FQ5T754 118 aa2.26□□□□□ -2.05
NUP85-220ENST00000583070 KRTAP4-4Q9BYR3 166 aa2.22□□□□□ -2.05
NUP85-220ENST00000583070 KRTAP21-2Q3LI59 83 aa2.14□□□□□ -2.07
NUP85-220ENST00000583070 INE1O15225 51 aa2.08□□□□□ -2.08
NUP85-220ENST00000583070 PRM1P04553 51 aa1.99□□□□□ -2.09
NUP85-220ENST00000583070 PHGR1C9JFL3 82 aa1.93□□□□□ -2.1
NUP85-220ENST00000583070 MUC19Q7Z5P9 8384 aa1.67□□□□□ -2.14
NUP85-220ENST00000583070 KRTAP21-1Q3LI58 79 aa1.34□□□□□ -2.19
NUP85-220ENST00000583070 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 95.7 ms