RNA–Protein interactions for RNA: ENST00000583038.5

ERBB2-214, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 4,930 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-214ENST00000583038 LPAP08519 4548 aa4.97□□□□□ -1.61
ERBB2-214ENST00000583038 LCE2AQ5TA79 106 aaPredicted RBP4.93□□□□□ -1.62
ERBB2-214ENST00000583038 KRTAP19-7Q3SYF9 63 aa4.92□□□□□ -1.62
ERBB2-214ENST00000583038 KRTAP9-2Q9BYQ4 174 aa4.89□□□□□ -1.63
ERBB2-214ENST00000583038 UBR4Q5T4S7 5183 aa4.86□□□□□ -1.63
ERBB2-214ENST00000583038 RNF213Q63HN8 5207 aa4.86□□□□□ -1.63
ERBB2-214ENST00000583038 MT1AP04731 61 aa4.86□□□□□ -1.63
ERBB2-214ENST00000583038 LOC100996750A0A140TA64 210 aa4.85□□□□□ -1.63
ERBB2-214ENST00000583038 PRM1P04553 51 aa4.84□□□□□ -1.64
ERBB2-214ENST00000583038 MT4P47944 62 aa4.83□□□□□ -1.64
ERBB2-214ENST00000583038 TNXBP22105 4242 aa4.83□□□□□ -1.64
ERBB2-214ENST00000583038 KRTAP4-3Q9BYR4 195 aa4.83□□□□□ -1.64
ERBB2-214ENST00000583038 FAT4Q6V0I7 4981 aa4.79□□□□□ -1.64
ERBB2-214ENST00000583038 KRTAP2-3P0C7H8 128 aa4.75□□□□□ -1.65
ERBB2-214ENST00000583038 KRTAP2-4Q9BYR9 128 aa4.75□□□□□ -1.65
ERBB2-214ENST00000583038 KRTAP2-1Q9BYU5 128 aa4.75□□□□□ -1.65
ERBB2-214ENST00000583038 HMCN2Q8NDA2 5059 aa4.72□□□□□ -1.65
ERBB2-214ENST00000583038 LCE1AQ5T7P2 110 aa4.7□□□□□ -1.66
ERBB2-214ENST00000583038 LCE1DQ5T752 114 aa4.7□□□□□ -1.66
ERBB2-214ENST00000583038 LCE1BQ5T7P3 118 aa4.69□□□□□ -1.66
ERBB2-214ENST00000583038 OBSCNQ5VST9 7968 aa4.64□□□□□ -1.67
ERBB2-214ENST00000583038 FSIP2Q5CZC0 6907 aa4.62□□□□□ -1.67
ERBB2-214ENST00000583038 KRTAP9-6A0A140TA67 174 aa4.61□□□□□ -1.67
ERBB2-214ENST00000583038 MUC2Q02817 5179 aa4.61□□□□□ -1.67
ERBB2-214ENST00000583038 KRTAP6-3Q3LI67 103 aa4.52□□□□□ -1.69
ERBB2-214ENST00000583038 KRTAP4-9Q9BYQ8 210 aa4.5□□□□□ -1.69
ERBB2-214ENST00000583038 LCE5AQ5TCM9 118 aa4.49□□□□□ -1.69
ERBB2-214ENST00000583038 KRTAP9-6A8MVA2 160 aa4.44□□□□□ -1.7
ERBB2-214ENST00000583038 KRTAP20-1Q3LI63 56 aa4.44□□□□□ -1.7
ERBB2-214ENST00000583038 KRTAP6-1Q3LI64 71 aa4.43□□□□□ -1.7
ERBB2-214ENST00000583038 KRTAP9-4Q9BYQ2 154 aa4.42□□□□□ -1.7
ERBB2-214ENST00000583038 LCE4AQ5TA78 99 aa4.4□□□□□ -1.7
ERBB2-214ENST00000583038 KRTAP9-7A8MTY7 169 aa4.4□□□□□ -1.71
ERBB2-214ENST00000583038 KRTAP6-2Q3LI66 62 aa4.37□□□□□ -1.71
ERBB2-214ENST00000583038 SYNE2Q8WXH0 6885 aaKnown RBP4.35□□□□□ -1.71
ERBB2-214ENST00000583038 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.26□□□□□ -1.73
ERBB2-214ENST00000583038 KRTAP2-2Q9BYT5 123 aa4.26□□□□□ -1.73
ERBB2-214ENST00000583038 USH2AO75445 5202 aa4.15□□□□□ -1.75
ERBB2-214ENST00000583038 FCGBPQ9Y6R7 5405 aaPredicted RBP4.11□□□□□ -1.75
ERBB2-214ENST00000583038 DSTQ03001 7570 aaKnown RBP4.01□□□□□ -1.77
ERBB2-214ENST00000583038 LCE1CQ5T751 118 aa3.96□□□□□ -1.78
ERBB2-214ENST00000583038 LCE1EQ5T753 118 aa3.96□□□□□ -1.78
ERBB2-214ENST00000583038 LCE1FQ5T754 118 aa3.96□□□□□ -1.78
ERBB2-214ENST00000583038 MACF1Q9UPN3 7388 aaKnown RBP3.91□□□□□ -1.78
ERBB2-214ENST00000583038 KRTAP5-9P26371 169 aa3.89□□□□□ -1.79
ERBB2-214ENST00000583038 MUC19Q7Z5P9 8384 aa3.81□□□□□ -1.8
ERBB2-214ENST00000583038 KMT2DO14686 5537 aa3.8□□□□□ -1.8
ERBB2-214ENST00000583038 KRTAP9-9Q9BYP9 154 aa3.75□□□□□ -1.81
ERBB2-214ENST00000583038 NEBP20929 6669 aa3.71□□□□□ -1.82
ERBB2-214ENST00000583038 MDN1Q9NU22 5596 aa3.67□□□□□ -1.82
ERBB2-214ENST00000583038 SSPOA2VEC9 5147 aa3.66□□□□□ -1.82
ERBB2-214ENST00000583038 KRTAP20-2Q3LI61 65 aa3.65□□□□□ -1.83
ERBB2-214ENST00000583038 KRTAP4-6Q9BYQ5 205 aa3.6□□□□□ -1.83
ERBB2-214ENST00000583038 GPR98Q8WXG9 6306 aa3.59□□□□□ -1.84
ERBB2-214ENST00000583038 MUC12Q9UKN1 5478 aa3.55□□□□□ -1.84
ERBB2-214ENST00000583038 KRTAP4-11Q9BYQ6 195 aa3.52□□□□□ -1.85
ERBB2-214ENST00000583038 KRTAP5-4Q6L8H1 288 aa3.4□□□□□ -1.87
ERBB2-214ENST00000583038 KRTAP5-5Q701N2 237 aaPredicted RBP3.29□□□□□ -1.88
ERBB2-214ENST00000583038 KRTAP4-4Q9BYR3 166 aa3.18□□□□□ -1.9
ERBB2-214ENST00000583038 KRTAP4-12Q9BQ66 201 aa3.14□□□□□ -1.91
ERBB2-214ENST00000583038 KRTAP4-2Q9BYR5 136 aa3.14□□□□□ -1.91
ERBB2-214ENST00000583038 MUC5ACP98088 5654 aa3.02□□□□□ -1.93
ERBB2-214ENST00000583038 KRTAP5-3Q6L8H2 238 aa2.99□□□□□ -1.93
ERBB2-214ENST00000583038 HMCN1Q96RW7 5635 aa2.96□□□□□ -1.93
ERBB2-214ENST00000583038 AHNAK2Q8IVF2 5795 aa2.94□□□□□ -1.94
ERBB2-214ENST00000583038 KRTAP5-10Q6L8G5 202 aa2.71□□□□□ -1.98
ERBB2-214ENST00000583038 KRTAP5-2Q701N4 177 aa2.71□□□□□ -1.98
ERBB2-214ENST00000583038 KRTAP5-8O75690 187 aa2.67□□□□□ -1.98
ERBB2-214ENST00000583038 MUC5BQ9HC84 5762 aaPredicted RBP2.49□□□□□ -2.01
ERBB2-214ENST00000583038 KRTAP5-11Q6L8G4 156 aa2.49□□□□□ -2.01
ERBB2-214ENST00000583038 AHNAKQ09666 5890 aaKnown RBP2.42□□□□□ -2.02
ERBB2-214ENST00000583038 PHGR1C9JFL3 82 aa2.37□□□□□ -2.03
ERBB2-214ENST00000583038 KRTAP5-1Q6L8H4 278 aa2.35□□□□□ -2.03
ERBB2-214ENST00000583038 KRTAP21-2Q3LI59 83 aa2.29□□□□□ -2.04
ERBB2-214ENST00000583038 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.23□□□□□ -2.05
ERBB2-214ENST00000583038 KRTAP21-1Q3LI58 79 aa2.11□□□□□ -2.07
ERBB2-214ENST00000583038 KRTAP5-7Q6L8G8 165 aa1.92□□□□□ -2.1
ERBB2-214ENST00000583038 MUC16Q8WXI7 14507 aa1.45□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 54.7 ms