RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 SPRR2AP35326 72 aa3.46□□□□□ -1.86
RFFL-210ENST00000582308 PP632Q6XCG6 107 aa3.46□□□□□ -1.86
RFFL-210ENST00000582308 KTN1-AS1Q86SY8 53 aa3.44□□□□□ -1.86
RFFL-210ENST00000582308 NEBP20929 6669 aa3.42□□□□□ -1.86
RFFL-210ENST00000582308 KRTAP19-3Q7Z4W3 81 aa3.41□□□□□ -1.86
RFFL-210ENST00000582308 MT1LQ93083 61 aa3.41□□□□□ -1.86
RFFL-210ENST00000582308 LCE5AQ5TCM9 118 aa3.38□□□□□ -1.87
RFFL-210ENST00000582308 PRAC1Q96KF2 57 aa3.38□□□□□ -1.87
RFFL-210ENST00000582308 MT1GP13640 62 aa3.36□□□□□ -1.87
RFFL-210ENST00000582308 KRTAP15-1Q3LI76 137 aa3.36□□□□□ -1.87
RFFL-210ENST00000582308 SPRR2DP22532 72 aa3.33□□□□□ -1.88
RFFL-210ENST00000582308 MT1MQ8N339 61 aa3.32□□□□□ -1.88
RFFL-210ENST00000582308 KRTAP4-7Q9BYR0 210 aa3.28□□□□□ -1.88
RFFL-210ENST00000582308 KRTAP19-4Q3LI73 84 aa3.26□□□□□ -1.89
RFFL-210ENST00000582308 KRTAP4-3Q9BYR4 195 aa3.26□□□□□ -1.89
RFFL-210ENST00000582308 KRTAP2-3P0C7H8 128 aa3.25□□□□□ -1.89
RFFL-210ENST00000582308 KRTAP2-4Q9BYR9 128 aa3.25□□□□□ -1.89
RFFL-210ENST00000582308 KRTAP20-1Q3LI63 56 aa3.24□□□□□ -1.89
RFFL-210ENST00000582308 LCE3CQ5T5A8 94 aa3.24□□□□□ -1.89
RFFL-210ENST00000582308 LCE3BQ5TA77 95 aa3.23□□□□□ -1.89
RFFL-210ENST00000582308 DSTQ03001 7570 aaKnown RBP3.19□□□□□ -1.9
RFFL-210ENST00000582308 KRTAP2-2Q9BYT5 123 aa3.16□□□□□ -1.9
RFFL-210ENST00000582308 KRTAP2-1Q9BYU5 128 aa3.16□□□□□ -1.9
RFFL-210ENST00000582308 LOC100996750A0A140TA64 210 aa3.09□□□□□ -1.91
RFFL-210ENST00000582308 KRTAP9-6A8MVA2 160 aa3.08□□□□□ -1.92
RFFL-210ENST00000582308 KRTAP5-5Q701N2 237 aaPredicted RBP3.02□□□□□ -1.93
RFFL-210ENST00000582308 SPRR5A0A1B0GTR4 108 aa3.01□□□□□ -1.93
RFFL-210ENST00000582308 KRTAP5-4Q6L8H1 288 aa2.99□□□□□ -1.93
RFFL-210ENST00000582308 LCE4AQ5TA78 99 aa2.96□□□□□ -1.94
RFFL-210ENST00000582308 KRTAP4-9Q9BYQ8 210 aa2.94□□□□□ -1.94
RFFL-210ENST00000582308 MT4P47944 62 aa2.91□□□□□ -1.94
RFFL-210ENST00000582308 LCE1DQ5T752 114 aa2.9□□□□□ -1.95
RFFL-210ENST00000582308 MT1AP04731 61 aa2.89□□□□□ -1.95
RFFL-210ENST00000582308 KRTAP6-1Q3LI64 71 aa2.88□□□□□ -1.95
RFFL-210ENST00000582308 KRTAP4-6Q9BYQ5 205 aa2.88□□□□□ -1.95
RFFL-210ENST00000582308 KRTAP12-4P60329 112 aa2.84□□□□□ -1.95
RFFL-210ENST00000582308 HMCN1Q96RW7 5635 aa2.84□□□□□ -1.96
RFFL-210ENST00000582308 SYNE1Q8NF91 8797 aaKnown RBP2.81□□□□□ -1.96
RFFL-210ENST00000582308 KRTAP20-2Q3LI61 65 aa2.8□□□□□ -1.96
RFFL-210ENST00000582308 KRTAP9-4Q9BYQ2 154 aa2.78□□□□□ -1.96
RFFL-210ENST00000582308 LUZP6Q538Z0 58 aa2.76□□□□□ -1.97
RFFL-210ENST00000582308 KRTAP5-3Q6L8H2 238 aa2.71□□□□□ -1.98
RFFL-210ENST00000582308 KRTAP6-2Q3LI66 62 aa2.69□□□□□ -1.98
RFFL-210ENST00000582308 KRTAP5-2Q701N4 177 aa2.68□□□□□ -1.98
RFFL-210ENST00000582308 AHNAK2Q8IVF2 5795 aa2.66□□□□□ -1.98
RFFL-210ENST00000582308 NDUFAF8A1L188 74 aa2.62□□□□□ -1.99
RFFL-210ENST00000582308 MT3P25713 68 aa2.62□□□□□ -1.99
RFFL-210ENST00000582308 GPR98Q8WXG9 6306 aa2.58□□□□□ -2
RFFL-210ENST00000582308 KRTAP5-10Q6L8G5 202 aa2.54□□□□□ -2
RFFL-210ENST00000582308 KRTAP4-11Q9BYQ6 195 aa2.48□□□□□ -2.01
RFFL-210ENST00000582308 OBSCNQ5VST9 7968 aa2.41□□□□□ -2.02
RFFL-210ENST00000582308 KRTAP5-8O75690 187 aa2.39□□□□□ -2.03
RFFL-210ENST00000582308 KRTAP5-7Q6L8G8 165 aa2.39□□□□□ -2.03
RFFL-210ENST00000582308 LCE3DQ9BYE3 92 aa2.39□□□□□ -2.03
RFFL-210ENST00000582308 KRTAP5-1Q6L8H4 278 aa2.35□□□□□ -2.03
RFFL-210ENST00000582308 LCE1EQ5T753 118 aa2.34□□□□□ -2.03
RFFL-210ENST00000582308 H3BS24 57 aa2.33□□□□□ -2.04
RFFL-210ENST00000582308 A0A0A0MQY5 61 aa2.32□□□□□ -2.04
RFFL-210ENST00000582308 LCE3EQ5T5B0 92 aa2.3□□□□□ -2.04
RFFL-210ENST00000582308 MUC5ACP98088 5654 aa2.28□□□□□ -2.04
RFFL-210ENST00000582308 INE1O15225 51 aa2.23□□□□□ -2.05
RFFL-210ENST00000582308 KRTAP4-2Q9BYR5 136 aa2.21□□□□□ -2.06
RFFL-210ENST00000582308 LCE1BQ5T7P3 118 aa2.19□□□□□ -2.06
RFFL-210ENST00000582308 KRTAP9-9Q9BYP9 154 aa2.19□□□□□ -2.06
RFFL-210ENST00000582308 LCE1CQ5T751 118 aa2.17□□□□□ -2.06
RFFL-210ENST00000582308 MUC5BQ9HC84 5762 aaPredicted RBP2.1□□□□□ -2.07
RFFL-210ENST00000582308 AHNAKQ09666 5890 aaKnown RBP2.08□□□□□ -2.08
RFFL-210ENST00000582308 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.02□□□□□ -2.09
RFFL-210ENST00000582308 KRTAP5-11Q6L8G4 156 aa1.94□□□□□ -2.1
RFFL-210ENST00000582308 PRM1P04553 51 aa1.91□□□□□ -2.1
RFFL-210ENST00000582308 KRTAP21-2Q3LI59 83 aa1.89□□□□□ -2.11
RFFL-210ENST00000582308 KRTAP4-12Q9BQ66 201 aa1.89□□□□□ -2.11
RFFL-210ENST00000582308 LCE1FQ5T754 118 aa1.8□□□□□ -2.12
RFFL-210ENST00000582308 KRTAP4-4Q9BYR3 166 aa1.7□□□□□ -2.14
RFFL-210ENST00000582308 PHGR1C9JFL3 82 aa1.67□□□□□ -2.14
RFFL-210ENST00000582308 MUC19Q7Z5P9 8384 aa1.48□□□□□ -2.17
RFFL-210ENST00000582308 KRTAP21-1Q3LI58 79 aa1.13□□□□□ -2.23
RFFL-210ENST00000582308 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 168 ms