RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 KRTAP2-3P0C7H8 128 aa4.25□□□□□ -1.73
CSNK1D-217ENST00000581241 KRTAP2-4Q9BYR9 128 aa4.25□□□□□ -1.73
CSNK1D-217ENST00000581241 KRTAP2-1Q9BYU5 128 aa4.25□□□□□ -1.73
CSNK1D-217ENST00000581241 LCE1BQ5T7P3 118 aa4.21□□□□□ -1.74
CSNK1D-217ENST00000581241 MT1AP04731 61 aa4.2□□□□□ -1.74
CSNK1D-217ENST00000581241 LCE1DQ5T752 114 aa4.18□□□□□ -1.74
CSNK1D-217ENST00000581241 KMT2CQ8NEZ4 4911 aaKnown RBP4.16□□□□□ -1.74
CSNK1D-217ENST00000581241 KRTAP19-7Q3SYF9 63 aa4.14□□□□□ -1.75
CSNK1D-217ENST00000581241 BIRC6Q9NR09 4857 aa4.13□□□□□ -1.75
CSNK1D-217ENST00000581241 KRTAP4-9Q9BYQ8 210 aa4.12□□□□□ -1.75
CSNK1D-217ENST00000581241 PCLOQ9Y6V0 5065 aa4.06□□□□□ -1.76
CSNK1D-217ENST00000581241 KRTAP9-2Q9BYQ4 174 aa4.06□□□□□ -1.76
CSNK1D-217ENST00000581241 KRTAP6-2Q3LI66 62 aa3.98□□□□□ -1.77
CSNK1D-217ENST00000581241 LCE5AQ5TCM9 118 aa3.94□□□□□ -1.78
CSNK1D-217ENST00000581241 KRTAP6-1Q3LI64 71 aa3.91□□□□□ -1.78
CSNK1D-217ENST00000581241 KRTAP9-4Q9BYQ2 154 aa3.9□□□□□ -1.78
CSNK1D-217ENST00000581241 KRTAP9-6A0A140TA67 174 aa3.9□□□□□ -1.78
CSNK1D-217ENST00000581241 ABCA13Q86UQ4 5058 aa3.89□□□□□ -1.79
CSNK1D-217ENST00000581241 KRTAP9-6A8MVA2 160 aa3.88□□□□□ -1.79
CSNK1D-217ENST00000581241 EPPK1P58107 5090 aaKnown RBP3.88□□□□□ -1.79
CSNK1D-217ENST00000581241 LCE2AQ5TA79 106 aaPredicted RBP3.84□□□□□ -1.79
CSNK1D-217ENST00000581241 KRTAP9-7A8MTY7 169 aa3.79□□□□□ -1.8
CSNK1D-217ENST00000581241 LCE1AQ5T7P2 110 aa3.77□□□□□ -1.81
CSNK1D-217ENST00000581241 HMCN2Q8NDA2 5059 aa3.76□□□□□ -1.81
CSNK1D-217ENST00000581241 KRTAP20-1Q3LI63 56 aa3.75□□□□□ -1.81
CSNK1D-217ENST00000581241 FAT4Q6V0I7 4981 aa3.74□□□□□ -1.81
CSNK1D-217ENST00000581241 RNF213Q63HN8 5207 aa3.7□□□□□ -1.82
CSNK1D-217ENST00000581241 LCE4AQ5TA78 99 aa3.7□□□□□ -1.82
CSNK1D-217ENST00000581241 UBR4Q5T4S7 5183 aa3.66□□□□□ -1.82
CSNK1D-217ENST00000581241 KRTAP6-3Q3LI67 103 aa3.64□□□□□ -1.83
CSNK1D-217ENST00000581241 LCE1CQ5T751 118 aa3.59□□□□□ -1.83
CSNK1D-217ENST00000581241 LCE1EQ5T753 118 aa3.59□□□□□ -1.83
CSNK1D-217ENST00000581241 LCE1FQ5T754 118 aa3.59□□□□□ -1.83
CSNK1D-217ENST00000581241 KRTAP2-2Q9BYT5 123 aa3.53□□□□□ -1.84
CSNK1D-217ENST00000581241 SYNE2Q8WXH0 6885 aaKnown RBP3.52□□□□□ -1.85
CSNK1D-217ENST00000581241 MUC2Q02817 5179 aa3.5□□□□□ -1.85
CSNK1D-217ENST00000581241 FSIP2Q5CZC0 6907 aa3.5□□□□□ -1.85
CSNK1D-217ENST00000581241 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.48□□□□□ -1.85
CSNK1D-217ENST00000581241 SYNE1Q8NF91 8797 aaKnown RBP3.38□□□□□ -1.87
CSNK1D-217ENST00000581241 KRTAP4-11Q9BYQ6 195 aa3.31□□□□□ -1.88
CSNK1D-217ENST00000581241 KRTAP9-9Q9BYP9 154 aa3.21□□□□□ -1.9
CSNK1D-217ENST00000581241 OBSCNQ5VST9 7968 aa3.2□□□□□ -1.9
CSNK1D-217ENST00000581241 USH2AO75445 5202 aa3.15□□□□□ -1.91
CSNK1D-217ENST00000581241 KMT2DO14686 5537 aa3.09□□□□□ -1.92
CSNK1D-217ENST00000581241 FCGBPQ9Y6R7 5405 aaPredicted RBP3.07□□□□□ -1.92
CSNK1D-217ENST00000581241 KRTAP5-9P26371 169 aa3.05□□□□□ -1.92
CSNK1D-217ENST00000581241 KRTAP20-2Q3LI61 65 aa3.04□□□□□ -1.92
CSNK1D-217ENST00000581241 KRTAP4-6Q9BYQ5 205 aa3.03□□□□□ -1.92
CSNK1D-217ENST00000581241 KRTAP5-5Q701N2 237 aaPredicted RBP3.01□□□□□ -1.93
CSNK1D-217ENST00000581241 DSTQ03001 7570 aaKnown RBP2.95□□□□□ -1.94
CSNK1D-217ENST00000581241 KRTAP4-4Q9BYR3 166 aa2.93□□□□□ -1.94
CSNK1D-217ENST00000581241 SSPOA2VEC9 5147 aa2.89□□□□□ -1.95
CSNK1D-217ENST00000581241 NEBP20929 6669 aa2.88□□□□□ -1.95
CSNK1D-217ENST00000581241 MACF1Q9UPN3 7388 aaKnown RBP2.86□□□□□ -1.95
CSNK1D-217ENST00000581241 KRTAP5-4Q6L8H1 288 aa2.86□□□□□ -1.95
CSNK1D-217ENST00000581241 MUC12Q9UKN1 5478 aa2.82□□□□□ -1.96
CSNK1D-217ENST00000581241 KRTAP4-12Q9BQ66 201 aa2.8□□□□□ -1.96
CSNK1D-217ENST00000581241 KRTAP4-2Q9BYR5 136 aa2.8□□□□□ -1.96
CSNK1D-217ENST00000581241 GPR98Q8WXG9 6306 aa2.65□□□□□ -1.99
CSNK1D-217ENST00000581241 MUC19Q7Z5P9 8384 aa2.62□□□□□ -1.99
CSNK1D-217ENST00000581241 MDN1Q9NU22 5596 aa2.52□□□□□ -2.01
CSNK1D-217ENST00000581241 KRTAP5-3Q6L8H2 238 aa2.44□□□□□ -2.02
CSNK1D-217ENST00000581241 KRTAP5-10Q6L8G5 202 aa2.33□□□□□ -2.04
CSNK1D-217ENST00000581241 MUC5ACP98088 5654 aa2.17□□□□□ -2.06
CSNK1D-217ENST00000581241 KRTAP5-2Q701N4 177 aa2.16□□□□□ -2.06
CSNK1D-217ENST00000581241 KRTAP5-8O75690 187 aa2.13□□□□□ -2.07
CSNK1D-217ENST00000581241 PHGR1C9JFL3 82 aa2.07□□□□□ -2.08
CSNK1D-217ENST00000581241 KRTAP5-1Q6L8H4 278 aa2.05□□□□□ -2.08
CSNK1D-217ENST00000581241 HMCN1Q96RW7 5635 aa2.04□□□□□ -2.08
CSNK1D-217ENST00000581241 AHNAK2Q8IVF2 5795 aa2.02□□□□□ -2.09
CSNK1D-217ENST00000581241 KRTAP5-11Q6L8G4 156 aa1.99□□□□□ -2.09
CSNK1D-217ENST00000581241 KRTAP21-1Q3LI58 79 aa1.96□□□□□ -2.1
CSNK1D-217ENST00000581241 MUC5BQ9HC84 5762 aaPredicted RBP1.95□□□□□ -2.1
CSNK1D-217ENST00000581241 KRTAP21-2Q3LI59 83 aa1.92□□□□□ -2.1
CSNK1D-217ENST00000581241 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.75□□□□□ -2.13
CSNK1D-217ENST00000581241 AHNAKQ09666 5890 aaKnown RBP1.71□□□□□ -2.14
CSNK1D-217ENST00000581241 KRTAP5-7Q6L8G8 165 aa1.55□□□□□ -2.16
CSNK1D-217ENST00000581241 MUC16Q8WXI7 14507 aa1.35□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 11.5 ms