RNA–Protein interactions for RNA: ENST00000581068.5

SKA2-206, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-206ENST00000581068 KRTAP10-12P60413 245 aa4.36□□□□□ -1.71
SKA2-206ENST00000581068 PRAC1Q96KF2 57 aa4.36□□□□□ -1.71
SKA2-206ENST00000581068 PP632Q6XCG6 107 aa4.3□□□□□ -1.72
SKA2-206ENST00000581068 LCE3AQ5TA76 89 aa4.28□□□□□ -1.72
SKA2-206ENST00000581068 KRTAP8-1Q8IUC2 63 aa4.2□□□□□ -1.74
SKA2-206ENST00000581068 SVIPQ8NHG7 77 aa4.18□□□□□ -1.74
SKA2-206ENST00000581068 KRTAP19-5Q3LI72 72 aa4.13□□□□□ -1.75
SKA2-206ENST00000581068 MUC12Q9UKN1 5478 aa4.13□□□□□ -1.75
SKA2-206ENST00000581068 NEBP20929 6669 aa4.13□□□□□ -1.75
SKA2-206ENST00000581068 KRTAP12-3P60328 96 aa4.12□□□□□ -1.75
SKA2-206ENST00000581068 KRTAP19-7Q3SYF9 63 aa4.08□□□□□ -1.76
SKA2-206ENST00000581068 LCE1AQ5T7P2 110 aa4.07□□□□□ -1.76
SKA2-206ENST00000581068 KMT2DO14686 5537 aa4.06□□□□□ -1.76
SKA2-206ENST00000581068 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.05□□□□□ -1.76
SKA2-206ENST00000581068 MT1EP04732 61 aa4.03□□□□□ -1.76
SKA2-206ENST00000581068 KRTAP6-3Q3LI67 103 aa4.02□□□□□ -1.77
SKA2-206ENST00000581068 SPRR2FQ96RM1 72 aa4.01□□□□□ -1.77
SKA2-206ENST00000581068 KRTAP5-9P26371 169 aa4□□□□□ -1.77
SKA2-206ENST00000581068 MDN1Q9NU22 5596 aa3.95□□□□□ -1.78
SKA2-206ENST00000581068 MT1LQ93083 61 aa3.94□□□□□ -1.78
SKA2-206ENST00000581068 KRTAP5-11Q6L8G4 156 aa3.9□□□□□ -1.79
SKA2-206ENST00000581068 KRTAP19-3Q7Z4W3 81 aa3.89□□□□□ -1.79
SKA2-206ENST00000581068 MT1GP13640 62 aa3.87□□□□□ -1.79
SKA2-206ENST00000581068 LCE3CQ5T5A8 94 aa3.85□□□□□ -1.79
SKA2-206ENST00000581068 A0A0A0MQY5 61 aa3.84□□□□□ -1.79
SKA2-206ENST00000581068 SPRR2EP22531 72 aa3.84□□□□□ -1.79
SKA2-206ENST00000581068 SPRR2BP35325 72 aa3.84□□□□□ -1.79
SKA2-206ENST00000581068 SPRR2AP35326 72 aa3.84□□□□□ -1.79
SKA2-206ENST00000581068 KRTAP2-2Q9BYT5 123 aa3.82□□□□□ -1.8
SKA2-206ENST00000581068 KRTAP20-1Q3LI63 56 aa3.8□□□□□ -1.8
SKA2-206ENST00000581068 MT1MQ8N339 61 aa3.8□□□□□ -1.8
SKA2-206ENST00000581068 SPRR5A0A1B0GTR4 108 aa3.75□□□□□ -1.81
SKA2-206ENST00000581068 SPRR2DP22532 72 aa3.71□□□□□ -1.82
SKA2-206ENST00000581068 KRTAP4-3Q9BYR4 195 aa3.7□□□□□ -1.82
SKA2-206ENST00000581068 LCE1EQ5T753 118 aa3.68□□□□□ -1.82
SKA2-206ENST00000581068 KRTAP2-3P0C7H8 128 aa3.61□□□□□ -1.83
SKA2-206ENST00000581068 KRTAP2-4Q9BYR9 128 aa3.61□□□□□ -1.83
SKA2-206ENST00000581068 KRTAP9-6A8MVA2 160 aa3.6□□□□□ -1.83
SKA2-206ENST00000581068 LUZP6Q538Z0 58 aa3.6□□□□□ -1.83
SKA2-206ENST00000581068 DSTQ03001 7570 aaKnown RBP3.51□□□□□ -1.85
SKA2-206ENST00000581068 KRTAP2-1Q9BYU5 128 aa3.49□□□□□ -1.85
SKA2-206ENST00000581068 KRTAP5-1Q6L8H4 278 aa3.48□□□□□ -1.85
SKA2-206ENST00000581068 NDUFAF8A1L188 74 aa3.42□□□□□ -1.86
SKA2-206ENST00000581068 KRTAP5-5Q701N2 237 aaPredicted RBP3.42□□□□□ -1.86
SKA2-206ENST00000581068 KRTAP5-4Q6L8H1 288 aa3.4□□□□□ -1.87
SKA2-206ENST00000581068 MT1AP04731 61 aa3.36□□□□□ -1.87
SKA2-206ENST00000581068 KRTAP4-4Q9BYR3 166 aa3.36□□□□□ -1.87
SKA2-206ENST00000581068 GPR98Q8WXG9 6306 aa3.36□□□□□ -1.87
SKA2-206ENST00000581068 MT3P25713 68 aa3.34□□□□□ -1.87
SKA2-206ENST00000581068 KRTAP6-1Q3LI64 71 aa3.31□□□□□ -1.88
SKA2-206ENST00000581068 HMCN1Q96RW7 5635 aa3.26□□□□□ -1.89
SKA2-206ENST00000581068 KRTAP12-4P60329 112 aa3.24□□□□□ -1.89
SKA2-206ENST00000581068 MT4P47944 62 aa3.22□□□□□ -1.89
SKA2-206ENST00000581068 AHNAK2Q8IVF2 5795 aa3.22□□□□□ -1.89
SKA2-206ENST00000581068 SYNE1Q8NF91 8797 aaKnown RBP3.17□□□□□ -1.9
SKA2-206ENST00000581068 LCE1FQ5T754 118 aa3.13□□□□□ -1.91
SKA2-206ENST00000581068 OBSCNQ5VST9 7968 aa3.11□□□□□ -1.91
SKA2-206ENST00000581068 KRTAP20-2Q3LI61 65 aa3.11□□□□□ -1.91
SKA2-206ENST00000581068 KRTAP6-2Q3LI66 62 aa3.06□□□□□ -1.92
SKA2-206ENST00000581068 KRTAP5-2Q701N4 177 aa3□□□□□ -1.93
SKA2-206ENST00000581068 KRTAP5-10Q6L8G5 202 aa2.99□□□□□ -1.93
SKA2-206ENST00000581068 LCE3DQ9BYE3 92 aa2.88□□□□□ -1.95
SKA2-206ENST00000581068 INE1O15225 51 aa2.86□□□□□ -1.95
SKA2-206ENST00000581068 KRTAP5-7Q6L8G8 165 aa2.82□□□□□ -1.96
SKA2-206ENST00000581068 LCE3EQ5T5B0 92 aa2.8□□□□□ -1.96
SKA2-206ENST00000581068 AHNAKQ09666 5890 aaKnown RBP2.62□□□□□ -1.99
SKA2-206ENST00000581068 KRTAP5-8O75690 187 aa2.61□□□□□ -1.99
SKA2-206ENST00000581068 MUC5BQ9HC84 5762 aaPredicted RBP2.6□□□□□ -1.99
SKA2-206ENST00000581068 MUC5ACP98088 5654 aa2.59□□□□□ -2
SKA2-206ENST00000581068 LCE1BQ5T7P3 118 aa2.5□□□□□ -2.01
SKA2-206ENST00000581068 LCE1CQ5T751 118 aa2.48□□□□□ -2.01
SKA2-206ENST00000581068 PRM1P04553 51 aa2.38□□□□□ -2.03
SKA2-206ENST00000581068 KRTAP21-2Q3LI59 83 aa2.17□□□□□ -2.06
SKA2-206ENST00000581068 MUC19Q7Z5P9 8384 aa2.12□□□□□ -2.07
SKA2-206ENST00000581068 PHGR1C9JFL3 82 aa1.88□□□□□ -2.11
SKA2-206ENST00000581068 KRTAP21-1Q3LI58 79 aa1.44□□□□□ -2.18
SKA2-206ENST00000581068 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 56.5 ms