RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 KRTAP19-7Q3SYF9 63 aa4.68□□□□□ -1.66
CDK5RAP3-217ENST00000580287 KRTAP2-2Q9BYT5 123 aa4.59□□□□□ -1.67
CDK5RAP3-217ENST00000580287 KRTAP9-4Q9BYQ2 154 aa4.58□□□□□ -1.68
CDK5RAP3-217ENST00000580287 MT1EP04732 61 aa4.57□□□□□ -1.68
CDK5RAP3-217ENST00000580287 SPRR2FQ96RM1 72 aa4.57□□□□□ -1.68
CDK5RAP3-217ENST00000580287 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.56□□□□□ -1.68
CDK5RAP3-217ENST00000580287 MDN1Q9NU22 5596 aa4.53□□□□□ -1.68
CDK5RAP3-217ENST00000580287 LCE3CQ5T5A8 94 aa4.5□□□□□ -1.69
CDK5RAP3-217ENST00000580287 LCE1FQ5T754 118 aa4.5□□□□□ -1.69
CDK5RAP3-217ENST00000580287 MT1LQ93083 61 aa4.48□□□□□ -1.69
CDK5RAP3-217ENST00000580287 KRTAP4-7Q9BYR0 210 aa4.48□□□□□ -1.69
CDK5RAP3-217ENST00000580287 DSTQ03001 7570 aaKnown RBP4.43□□□□□ -1.7
CDK5RAP3-217ENST00000580287 KRTAP5-9P26371 169 aa4.43□□□□□ -1.7
CDK5RAP3-217ENST00000580287 KRTAP9-6A8MVA2 160 aa4.42□□□□□ -1.7
CDK5RAP3-217ENST00000580287 KRTAP19-3Q7Z4W3 81 aa4.39□□□□□ -1.71
CDK5RAP3-217ENST00000580287 KRTAP9-9Q9BYP9 154 aa4.37□□□□□ -1.71
CDK5RAP3-217ENST00000580287 KRTAP6-3Q3LI67 103 aa4.36□□□□□ -1.71
CDK5RAP3-217ENST00000580287 KRTAP4-3Q9BYR4 195 aa4.36□□□□□ -1.71
CDK5RAP3-217ENST00000580287 LCE1AQ5T7P2 110 aa4.34□□□□□ -1.71
CDK5RAP3-217ENST00000580287 KRTAP9-7A8MTY7 169 aa4.32□□□□□ -1.72
CDK5RAP3-217ENST00000580287 MT1GP13640 62 aa4.31□□□□□ -1.72
CDK5RAP3-217ENST00000580287 SPRR2EP22531 72 aa4.31□□□□□ -1.72
CDK5RAP3-217ENST00000580287 SPRR2BP35325 72 aa4.31□□□□□ -1.72
CDK5RAP3-217ENST00000580287 SPRR2AP35326 72 aa4.31□□□□□ -1.72
CDK5RAP3-217ENST00000580287 MT1MQ8N339 61 aa4.31□□□□□ -1.72
CDK5RAP3-217ENST00000580287 KRTAP19-4Q3LI73 84 aa4.28□□□□□ -1.72
CDK5RAP3-217ENST00000580287 LCE4AQ5TA78 99 aa4.26□□□□□ -1.73
CDK5RAP3-217ENST00000580287 LCE1EQ5T753 118 aa4.24□□□□□ -1.73
CDK5RAP3-217ENST00000580287 LOC100996750A0A140TA64 210 aa4.2□□□□□ -1.74
CDK5RAP3-217ENST00000580287 KRTAP2-3P0C7H8 128 aa4.19□□□□□ -1.74
CDK5RAP3-217ENST00000580287 KRTAP2-4Q9BYR9 128 aa4.19□□□□□ -1.74
CDK5RAP3-217ENST00000580287 KRTAP2-1Q9BYU5 128 aa4.19□□□□□ -1.74
CDK5RAP3-217ENST00000580287 SPRR2DP22532 72 aa4.14□□□□□ -1.75
CDK5RAP3-217ENST00000580287 NEBP20929 6669 aa4.13□□□□□ -1.75
CDK5RAP3-217ENST00000580287 LCE1DQ5T752 114 aa4.04□□□□□ -1.76
CDK5RAP3-217ENST00000580287 SYNE1Q8NF91 8797 aaKnown RBP4□□□□□ -1.77
CDK5RAP3-217ENST00000580287 LCE3BQ5TA77 95 aa3.98□□□□□ -1.77
CDK5RAP3-217ENST00000580287 LCE3EQ5T5B0 92 aa3.96□□□□□ -1.78
CDK5RAP3-217ENST00000580287 KRTAP5-5Q701N2 237 aaPredicted RBP3.87□□□□□ -1.79
CDK5RAP3-217ENST00000580287 OBSCNQ5VST9 7968 aa3.83□□□□□ -1.8
CDK5RAP3-217ENST00000580287 KRTAP6-1Q3LI64 71 aa3.82□□□□□ -1.8
CDK5RAP3-217ENST00000580287 KRTAP20-1Q3LI63 56 aa3.79□□□□□ -1.8
CDK5RAP3-217ENST00000580287 KRTAP4-9Q9BYQ8 210 aa3.77□□□□□ -1.81
CDK5RAP3-217ENST00000580287 MT1AP04731 61 aa3.75□□□□□ -1.81
CDK5RAP3-217ENST00000580287 MT3P25713 68 aa3.75□□□□□ -1.81
CDK5RAP3-217ENST00000580287 KRTAP12-4P60329 112 aa3.75□□□□□ -1.81
CDK5RAP3-217ENST00000580287 LCE3DQ9BYE3 92 aa3.71□□□□□ -1.82
CDK5RAP3-217ENST00000580287 MT4P47944 62 aa3.69□□□□□ -1.82
CDK5RAP3-217ENST00000580287 KRTAP5-4Q6L8H1 288 aa3.68□□□□□ -1.82
CDK5RAP3-217ENST00000580287 KRTAP4-6Q9BYQ5 205 aa3.65□□□□□ -1.82
CDK5RAP3-217ENST00000580287 HMCN1Q96RW7 5635 aa3.59□□□□□ -1.84
CDK5RAP3-217ENST00000580287 KRTAP6-2Q3LI66 62 aa3.53□□□□□ -1.84
CDK5RAP3-217ENST00000580287 KRTAP4-12Q9BQ66 201 aa3.52□□□□□ -1.85
CDK5RAP3-217ENST00000580287 KRTAP20-2Q3LI61 65 aa3.49□□□□□ -1.85
CDK5RAP3-217ENST00000580287 PRM1P04553 51 aa3.37□□□□□ -1.87
CDK5RAP3-217ENST00000580287 KRTAP5-3Q6L8H2 238 aa3.35□□□□□ -1.87
CDK5RAP3-217ENST00000580287 KRTAP5-2Q701N4 177 aa3.33□□□□□ -1.88
CDK5RAP3-217ENST00000580287 AHNAK2Q8IVF2 5795 aa3.11□□□□□ -1.91
CDK5RAP3-217ENST00000580287 KRTAP4-11Q9BYQ6 195 aa3.05□□□□□ -1.92
CDK5RAP3-217ENST00000580287 KRTAP5-10Q6L8G5 202 aa2.95□□□□□ -1.94
CDK5RAP3-217ENST00000580287 KRTAP5-1Q6L8H4 278 aa2.94□□□□□ -1.94
CDK5RAP3-217ENST00000580287 KRTAP5-8O75690 187 aa2.93□□□□□ -1.94
CDK5RAP3-217ENST00000580287 LCE1BQ5T7P3 118 aa2.9□□□□□ -1.95
CDK5RAP3-217ENST00000580287 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.95
CDK5RAP3-217ENST00000580287 GPR98Q8WXG9 6306 aa2.86□□□□□ -1.95
CDK5RAP3-217ENST00000580287 MUC5ACP98088 5654 aa2.85□□□□□ -1.95
CDK5RAP3-217ENST00000580287 KRTAP4-2Q9BYR5 136 aa2.81□□□□□ -1.96
CDK5RAP3-217ENST00000580287 LCE1CQ5T751 118 aa2.75□□□□□ -1.97
CDK5RAP3-217ENST00000580287 KRTAP5-7Q6L8G8 165 aa2.73□□□□□ -1.97
CDK5RAP3-217ENST00000580287 MUC5BQ9HC84 5762 aaPredicted RBP2.68□□□□□ -1.98
CDK5RAP3-217ENST00000580287 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.53□□□□□ -2.01
CDK5RAP3-217ENST00000580287 KRTAP21-2Q3LI59 83 aa2.48□□□□□ -2.01
CDK5RAP3-217ENST00000580287 KRTAP5-11Q6L8G4 156 aa2.41□□□□□ -2.02
CDK5RAP3-217ENST00000580287 KRTAP4-4Q9BYR3 166 aa2.33□□□□□ -2.04
CDK5RAP3-217ENST00000580287 AHNAKQ09666 5890 aaKnown RBP2.31□□□□□ -2.04
CDK5RAP3-217ENST00000580287 KRTAP21-1Q3LI58 79 aa2.14□□□□□ -2.07
CDK5RAP3-217ENST00000580287 PHGR1C9JFL3 82 aa2.1□□□□□ -2.07
CDK5RAP3-217ENST00000580287 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 10.1 ms