RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 KRTAP23-1A1A580 65 aa5.9□□□□□ -1.46
CSNK1D-212ENST00000580061 PMAIP1Q13794 54 aa5.87□□□□□ -1.47
CSNK1D-212ENST00000580061 PRO0628Q9UI54 55 aa5.87□□□□□ -1.47
CSNK1D-212ENST00000580061 MT1EP04732 61 aa5.86□□□□□ -1.47
CSNK1D-212ENST00000580061 MDN1Q9NU22 5596 aa5.86□□□□□ -1.47
CSNK1D-212ENST00000580061 LCE4AQ5TA78 99 aa5.84□□□□□ -1.47
CSNK1D-212ENST00000580061 NEBP20929 6669 aa5.83□□□□□ -1.48
CSNK1D-212ENST00000580061 SPRR2EP22531 72 aa5.82□□□□□ -1.48
CSNK1D-212ENST00000580061 SPRR2BP35325 72 aa5.82□□□□□ -1.48
CSNK1D-212ENST00000580061 SPRR2AP35326 72 aa5.82□□□□□ -1.48
CSNK1D-212ENST00000580061 LCE1AQ5T7P2 110 aa5.82□□□□□ -1.48
CSNK1D-212ENST00000580061 KRTAP4-11Q9BYQ6 195 aa5.81□□□□□ -1.48
CSNK1D-212ENST00000580061 KRTAP12-3P60328 96 aa5.79□□□□□ -1.48
CSNK1D-212ENST00000580061 PP632Q6XCG6 107 aa5.79□□□□□ -1.48
CSNK1D-212ENST00000580061 KRTAP19-3Q7Z4W3 81 aa5.72□□□□□ -1.49
CSNK1D-212ENST00000580061 MT1LQ93083 61 aa5.68□□□□□ -1.5
CSNK1D-212ENST00000580061 LCE5AQ5TCM9 118 aa5.67□□□□□ -1.5
CSNK1D-212ENST00000580061 MT1GP13640 62 aa5.63□□□□□ -1.51
CSNK1D-212ENST00000580061 SPRR2DP22532 72 aa5.61□□□□□ -1.51
CSNK1D-212ENST00000580061 KRTAP15-1Q3LI76 137 aa5.57□□□□□ -1.52
CSNK1D-212ENST00000580061 MT1MQ8N339 61 aa5.55□□□□□ -1.52
CSNK1D-212ENST00000580061 PRAC1Q96KF2 57 aa5.54□□□□□ -1.52
CSNK1D-212ENST00000580061 KRTAP5-3Q6L8H2 238 aa5.5□□□□□ -1.53
CSNK1D-212ENST00000580061 KTN1-AS1Q86SY8 53 aa5.5□□□□□ -1.53
CSNK1D-212ENST00000580061 KRTAP20-1Q3LI63 56 aa5.48□□□□□ -1.53
CSNK1D-212ENST00000580061 KRTAP19-4Q3LI73 84 aa5.48□□□□□ -1.53
CSNK1D-212ENST00000580061 KRTAP2-3P0C7H8 128 aa5.47□□□□□ -1.53
CSNK1D-212ENST00000580061 KRTAP2-4Q9BYR9 128 aa5.47□□□□□ -1.53
CSNK1D-212ENST00000580061 DSTQ03001 7570 aaKnown RBP5.41□□□□□ -1.54
CSNK1D-212ENST00000580061 KRTAP4-3Q9BYR4 195 aa5.41□□□□□ -1.54
CSNK1D-212ENST00000580061 LCE3CQ5T5A8 94 aa5.38□□□□□ -1.55
CSNK1D-212ENST00000580061 KRTAP2-2Q9BYT5 123 aa5.33□□□□□ -1.56
CSNK1D-212ENST00000580061 KRTAP2-1Q9BYU5 128 aa5.33□□□□□ -1.56
CSNK1D-212ENST00000580061 SVIPQ8NHG7 77 aa5.18□□□□□ -1.58
CSNK1D-212ENST00000580061 KRTAP9-6A8MVA2 160 aa5.08□□□□□ -1.6
CSNK1D-212ENST00000580061 KRTAP5-5Q701N2 237 aaPredicted RBP5.06□□□□□ -1.6
CSNK1D-212ENST00000580061 KRTAP5-4Q6L8H1 288 aa5.01□□□□□ -1.61
CSNK1D-212ENST00000580061 SPRR5A0A1B0GTR4 108 aa4.97□□□□□ -1.61
CSNK1D-212ENST00000580061 MT4P47944 62 aa4.88□□□□□ -1.63
CSNK1D-212ENST00000580061 SYNE1Q8NF91 8797 aaKnown RBP4.87□□□□□ -1.63
CSNK1D-212ENST00000580061 MT1AP04731 61 aa4.84□□□□□ -1.63
CSNK1D-212ENST00000580061 H3BS24 57 aa4.81□□□□□ -1.64
CSNK1D-212ENST00000580061 KRTAP6-1Q3LI64 71 aa4.79□□□□□ -1.64
CSNK1D-212ENST00000580061 KRTAP12-4P60329 112 aa4.77□□□□□ -1.65
CSNK1D-212ENST00000580061 HMCN1Q96RW7 5635 aa4.77□□□□□ -1.65
CSNK1D-212ENST00000580061 KRTAP20-2Q3LI61 65 aa4.69□□□□□ -1.66
CSNK1D-212ENST00000580061 LUZP6Q538Z0 58 aa4.57□□□□□ -1.68
CSNK1D-212ENST00000580061 KRTAP5-2Q701N4 177 aa4.48□□□□□ -1.69
CSNK1D-212ENST00000580061 KRTAP6-2Q3LI66 62 aa4.47□□□□□ -1.69
CSNK1D-212ENST00000580061 AHNAK2Q8IVF2 5795 aa4.41□□□□□ -1.7
CSNK1D-212ENST00000580061 MT3P25713 68 aa4.4□□□□□ -1.71
CSNK1D-212ENST00000580061 KRTAP5-10Q6L8G5 202 aa4.28□□□□□ -1.72
CSNK1D-212ENST00000580061 GPR98Q8WXG9 6306 aa4.26□□□□□ -1.73
CSNK1D-212ENST00000580061 NDUFAF8A1L188 74 aa4.17□□□□□ -1.74
CSNK1D-212ENST00000580061 OBSCNQ5VST9 7968 aa4.14□□□□□ -1.75
CSNK1D-212ENST00000580061 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.07□□□□□ -1.76
CSNK1D-212ENST00000580061 KRTAP5-7Q6L8G8 165 aa4.03□□□□□ -1.76
CSNK1D-212ENST00000580061 KRTAP5-8O75690 187 aa4.02□□□□□ -1.77
CSNK1D-212ENST00000580061 LCE3DQ9BYE3 92 aa3.97□□□□□ -1.77
CSNK1D-212ENST00000580061 KRTAP5-11Q6L8G4 156 aa3.94□□□□□ -1.78
CSNK1D-212ENST00000580061 LCE1EQ5T753 118 aa3.93□□□□□ -1.78
CSNK1D-212ENST00000580061 KRTAP5-1Q6L8H4 278 aa3.92□□□□□ -1.78
CSNK1D-212ENST00000580061 LCE3EQ5T5B0 92 aa3.82□□□□□ -1.8
CSNK1D-212ENST00000580061 MUC5ACP98088 5654 aa3.79□□□□□ -1.8
CSNK1D-212ENST00000580061 LCE1CQ5T751 118 aa3.65□□□□□ -1.83
CSNK1D-212ENST00000580061 LCE1BQ5T7P3 118 aa3.65□□□□□ -1.83
CSNK1D-212ENST00000580061 A0A0A0MQY5 61 aa3.55□□□□□ -1.84
CSNK1D-212ENST00000580061 MUC5BQ9HC84 5762 aaPredicted RBP3.54□□□□□ -1.84
CSNK1D-212ENST00000580061 INE1O15225 51 aa3.44□□□□□ -1.86
CSNK1D-212ENST00000580061 AHNAKQ09666 5890 aaKnown RBP3.44□□□□□ -1.86
CSNK1D-212ENST00000580061 KRTAP4-4Q9BYR3 166 aa3.42□□□□□ -1.86
CSNK1D-212ENST00000580061 KRTAP21-2Q3LI59 83 aa3.16□□□□□ -1.9
CSNK1D-212ENST00000580061 PRM1P04553 51 aa3.15□□□□□ -1.91
CSNK1D-212ENST00000580061 LCE1FQ5T754 118 aa3.05□□□□□ -1.92
CSNK1D-212ENST00000580061 PHGR1C9JFL3 82 aa2.8□□□□□ -1.96
CSNK1D-212ENST00000580061 MUC19Q7Z5P9 8384 aa2.52□□□□□ -2.01
CSNK1D-212ENST00000580061 KRTAP21-1Q3LI58 79 aa1.86□□□□□ -2.11
CSNK1D-212ENST00000580061 MUC16Q8WXI7 14507 aa1.81□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 70.7 ms