RNA–Protein interactions for RNA: ENST00000579647.1

CBX3P2-201, Transcript of chromobox 3 pseudogene 2, humanhuman

TSL 2 BASIC

Gene CBX3P2, Length 1,429 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P2-201ENST00000579647 TNP1P09430 55 aa6.39□□□□□ -1.39
CBX3P2-201ENST00000579647 KRTAP19-7Q3SYF9 63 aa6.37□□□□□ -1.39
CBX3P2-201ENST00000579647 KRTAP4-9Q9BYQ8 210 aa6.33□□□□□ -1.4
CBX3P2-201ENST00000579647 KRTAP2-3P0C7H8 128 aa6.33□□□□□ -1.4
CBX3P2-201ENST00000579647 SPRR2DP22532 72 aa6.33□□□□□ -1.4
CBX3P2-201ENST00000579647 KRTAP4-2Q9BYR5 136 aa6.33□□□□□ -1.4
CBX3P2-201ENST00000579647 KRTAP2-4Q9BYR9 128 aa6.33□□□□□ -1.4
CBX3P2-201ENST00000579647 K7ERS5 55 aa6.32□□□□□ -1.4
CBX3P2-201ENST00000579647 KRTAP19-5Q3LI72 72 aa6.3□□□□□ -1.4
CBX3P2-201ENST00000579647 MT1EP04732 61 aa6.29□□□□□ -1.4
CBX3P2-201ENST00000579647 LCE3AQ5TA76 89 aa6.28□□□□□ -1.4
CBX3P2-201ENST00000579647 KRTAP19-3Q7Z4W3 81 aa6.2□□□□□ -1.42
CBX3P2-201ENST00000579647 LCE5AQ5TCM9 118 aa6.16□□□□□ -1.42
CBX3P2-201ENST00000579647 KRTAP25-1Q3LHN0 102 aa6.14□□□□□ -1.43
CBX3P2-201ENST00000579647 KRTAP2-2Q9BYT5 123 aa6.14□□□□□ -1.43
CBX3P2-201ENST00000579647 KRTAP2-1Q9BYU5 128 aa6.14□□□□□ -1.43
CBX3P2-201ENST00000579647 PMAIP1Q13794 54 aa6.11□□□□□ -1.43
CBX3P2-201ENST00000579647 MT1GP13640 62 aa6.08□□□□□ -1.44
CBX3P2-201ENST00000579647 MT1LQ93083 61 aa6.06□□□□□ -1.44
CBX3P2-201ENST00000579647 KRTAP12-3P60328 96 aa6.03□□□□□ -1.44
CBX3P2-201ENST00000579647 KRTAP4-11Q9BYQ6 195 aa6.03□□□□□ -1.44
CBX3P2-201ENST00000579647 PP632Q6XCG6 107 aa6.01□□□□□ -1.45
CBX3P2-201ENST00000579647 KRTAP5-3Q6L8H2 238 aa5.99□□□□□ -1.45
CBX3P2-201ENST00000579647 MT1MQ8N339 61 aa5.99□□□□□ -1.45
CBX3P2-201ENST00000579647 KRTAP23-1A1A580 65 aa5.98□□□□□ -1.45
CBX3P2-201ENST00000579647 ROMO1P60602 79 aa5.95□□□□□ -1.46
CBX3P2-201ENST00000579647 KRTAP4-3Q9BYR4 195 aa5.88□□□□□ -1.47
CBX3P2-201ENST00000579647 DSTQ03001 7570 aaKnown RBP5.85□□□□□ -1.47
CBX3P2-201ENST00000579647 KTN1-AS1Q86SY8 53 aa5.84□□□□□ -1.47
CBX3P2-201ENST00000579647 KRTAP19-4Q3LI73 84 aa5.79□□□□□ -1.48
CBX3P2-201ENST00000579647 LCE4AQ5TA78 99 aa5.74□□□□□ -1.49
CBX3P2-201ENST00000579647 KRTAP15-1Q3LI76 137 aa5.73□□□□□ -1.49
CBX3P2-201ENST00000579647 A0A0A0MQY5 61 aa5.6□□□□□ -1.51
CBX3P2-201ENST00000579647 LCE3CQ5T5A8 94 aa5.58□□□□□ -1.52
CBX3P2-201ENST00000579647 PRAC1Q96KF2 57 aa5.58□□□□□ -1.52
CBX3P2-201ENST00000579647 MT4P47944 62 aa5.53□□□□□ -1.52
CBX3P2-201ENST00000579647 KRTAP5-4Q6L8H1 288 aa5.53□□□□□ -1.52
CBX3P2-201ENST00000579647 GPR98Q8WXG9 6306 aa5.48□□□□□ -1.53
CBX3P2-201ENST00000579647 KRTAP5-5Q701N2 237 aaPredicted RBP5.44□□□□□ -1.54
CBX3P2-201ENST00000579647 HMCN1Q96RW7 5635 aa5.33□□□□□ -1.56
CBX3P2-201ENST00000579647 KRTAP9-6A8MVA2 160 aa5.27□□□□□ -1.57
CBX3P2-201ENST00000579647 KRTAP12-4P60329 112 aa5.25□□□□□ -1.57
CBX3P2-201ENST00000579647 KRTAP20-2Q3LI61 65 aa5.22□□□□□ -1.57
CBX3P2-201ENST00000579647 SPRR5A0A1B0GTR4 108 aa5.2□□□□□ -1.58
CBX3P2-201ENST00000579647 SYNE1Q8NF91 8797 aaKnown RBP5.17□□□□□ -1.58
CBX3P2-201ENST00000579647 MT1AP04731 61 aa5.16□□□□□ -1.58
CBX3P2-201ENST00000579647 KRTAP6-1Q3LI64 71 aa5.14□□□□□ -1.59
CBX3P2-201ENST00000579647 AHNAK2Q8IVF2 5795 aa5.08□□□□□ -1.6
CBX3P2-201ENST00000579647 KRTAP5-10Q6L8G5 202 aa4.99□□□□□ -1.61
CBX3P2-201ENST00000579647 KRTAP5-2Q701N4 177 aa4.88□□□□□ -1.63
CBX3P2-201ENST00000579647 KRTAP6-2Q3LI66 62 aa4.85□□□□□ -1.63
CBX3P2-201ENST00000579647 KRTAP5-7Q6L8G8 165 aa4.8□□□□□ -1.64
CBX3P2-201ENST00000579647 LUZP6Q538Z0 58 aa4.79□□□□□ -1.64
CBX3P2-201ENST00000579647 MT3P25713 68 aa4.72□□□□□ -1.65
CBX3P2-201ENST00000579647 NDUFAF8A1L188 74 aa4.6□□□□□ -1.67
CBX3P2-201ENST00000579647 KRTAP5-8O75690 187 aa4.53□□□□□ -1.68
CBX3P2-201ENST00000579647 OBSCNQ5VST9 7968 aa4.48□□□□□ -1.69
CBX3P2-201ENST00000579647 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.37□□□□□ -1.71
CBX3P2-201ENST00000579647 KRTAP5-1Q6L8H4 278 aa4.35□□□□□ -1.71
CBX3P2-201ENST00000579647 LCE1EQ5T753 118 aa4.23□□□□□ -1.73
CBX3P2-201ENST00000579647 MUC5BQ9HC84 5762 aaPredicted RBP4.23□□□□□ -1.73
CBX3P2-201ENST00000579647 AHNAKQ09666 5890 aaKnown RBP4.21□□□□□ -1.74
CBX3P2-201ENST00000579647 MUC5ACP98088 5654 aa4.18□□□□□ -1.74
CBX3P2-201ENST00000579647 INE1O15225 51 aa4.08□□□□□ -1.76
CBX3P2-201ENST00000579647 LCE3DQ9BYE3 92 aa4.08□□□□□ -1.76
CBX3P2-201ENST00000579647 KRTAP5-11Q6L8G4 156 aa4.07□□□□□ -1.76
CBX3P2-201ENST00000579647 LCE1BQ5T7P3 118 aa4.04□□□□□ -1.76
CBX3P2-201ENST00000579647 LCE1CQ5T751 118 aa3.94□□□□□ -1.78
CBX3P2-201ENST00000579647 LCE3EQ5T5B0 92 aa3.88□□□□□ -1.79
CBX3P2-201ENST00000579647 LCE1FQ5T754 118 aa3.81□□□□□ -1.8
CBX3P2-201ENST00000579647 KRTAP4-4Q9BYR3 166 aa3.65□□□□□ -1.83
CBX3P2-201ENST00000579647 KRTAP21-2Q3LI59 83 aa3.36□□□□□ -1.87
CBX3P2-201ENST00000579647 PRM1P04553 51 aa3.08□□□□□ -1.92
CBX3P2-201ENST00000579647 PHGR1C9JFL3 82 aa3.05□□□□□ -1.92
CBX3P2-201ENST00000579647 MUC19Q7Z5P9 8384 aa2.75□□□□□ -1.97
CBX3P2-201ENST00000579647 KRTAP21-1Q3LI58 79 aa2.17□□□□□ -2.06
CBX3P2-201ENST00000579647 MUC16Q8WXI7 14507 aa1.99□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 130 ms