RNA–Protein interactions for RNA: ENST00000579146.5

PGAP3-206, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 2 BASIC

Gene PGAP3, Length 2,220 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-206ENST00000579146 KRTAP19-3Q7Z4W3 81 aa6.35□□□□□ -1.39
PGAP3-206ENST00000579146 MACF1Q9UPN3 7388 aaKnown RBP6.32□□□□□ -1.4
PGAP3-206ENST00000579146 MT1GP13640 62 aa6.31□□□□□ -1.4
PGAP3-206ENST00000579146 MT1MQ8N339 61 aa6.3□□□□□ -1.4
PGAP3-206ENST00000579146 KRTAP4-3Q9BYR4 195 aa6.3□□□□□ -1.4
PGAP3-206ENST00000579146 KRTAP2-3P0C7H8 128 aa6.29□□□□□ -1.4
PGAP3-206ENST00000579146 KRTAP2-4Q9BYR9 128 aa6.29□□□□□ -1.4
PGAP3-206ENST00000579146 KRTAP2-1Q9BYU5 128 aa6.29□□□□□ -1.4
PGAP3-206ENST00000579146 SPRR2FQ96RM1 72 aa6.23□□□□□ -1.41
PGAP3-206ENST00000579146 LOC100996750A0A140TA64 210 aa6.2□□□□□ -1.42
PGAP3-206ENST00000579146 LCE5AQ5TCM9 118 aa6.18□□□□□ -1.42
PGAP3-206ENST00000579146 KRTAP9-2Q9BYQ4 174 aa6.18□□□□□ -1.42
PGAP3-206ENST00000579146 SYNE2Q8WXH0 6885 aaKnown RBP6.11□□□□□ -1.43
PGAP3-206ENST00000579146 CRCT1Q9UGL9 99 aa6.05□□□□□ -1.44
PGAP3-206ENST00000579146 DSTQ03001 7570 aaKnown RBP6.04□□□□□ -1.44
PGAP3-206ENST00000579146 MDN1Q9NU22 5596 aa5.96□□□□□ -1.45
PGAP3-206ENST00000579146 KRTAP5-9P26371 169 aa5.96□□□□□ -1.46
PGAP3-206ENST00000579146 LCE1AQ5T7P2 110 aa5.89□□□□□ -1.47
PGAP3-206ENST00000579146 SPRR2EP22531 72 aa5.75□□□□□ -1.49
PGAP3-206ENST00000579146 SPRR2BP35325 72 aa5.75□□□□□ -1.49
PGAP3-206ENST00000579146 SPRR2AP35326 72 aa5.75□□□□□ -1.49
PGAP3-206ENST00000579146 KRTAP6-1Q3LI64 71 aa5.65□□□□□ -1.5
PGAP3-206ENST00000579146 MT1AP04731 61 aa5.63□□□□□ -1.51
PGAP3-206ENST00000579146 LCE3BQ5TA77 95 aa5.63□□□□□ -1.51
PGAP3-206ENST00000579146 KRTAP5-5Q701N2 237 aaPredicted RBP5.63□□□□□ -1.51
PGAP3-206ENST00000579146 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.58□□□□□ -1.52
PGAP3-206ENST00000579146 KRTAP6-3Q3LI67 103 aa5.58□□□□□ -1.52
PGAP3-206ENST00000579146 SPRR2DP22532 72 aa5.52□□□□□ -1.53
PGAP3-206ENST00000579146 SYNE1Q8NF91 8797 aaKnown RBP5.49□□□□□ -1.53
PGAP3-206ENST00000579146 KRTAP12-4P60329 112 aa5.47□□□□□ -1.53
PGAP3-206ENST00000579146 KRTAP9-6A0A140TA67 174 aa5.46□□□□□ -1.54
PGAP3-206ENST00000579146 KRTAP4-9Q9BYQ8 210 aa5.45□□□□□ -1.54
PGAP3-206ENST00000579146 KRTAP9-4Q9BYQ2 154 aa5.32□□□□□ -1.56
PGAP3-206ENST00000579146 NEBP20929 6669 aa5.27□□□□□ -1.57
PGAP3-206ENST00000579146 LCE3DQ9BYE3 92 aa5.26□□□□□ -1.57
PGAP3-206ENST00000579146 LCE3EQ5T5B0 92 aa5.16□□□□□ -1.58
PGAP3-206ENST00000579146 KRTAP6-2Q3LI66 62 aa5.11□□□□□ -1.59
PGAP3-206ENST00000579146 KRTAP5-4Q6L8H1 288 aa5.1□□□□□ -1.59
PGAP3-206ENST00000579146 KRTAP9-7A8MTY7 169 aa5.07□□□□□ -1.6
PGAP3-206ENST00000579146 MT3P25713 68 aa5.07□□□□□ -1.6
PGAP3-206ENST00000579146 OBSCNQ5VST9 7968 aa4.88□□□□□ -1.63
PGAP3-206ENST00000579146 KRTAP4-6Q9BYQ5 205 aa4.87□□□□□ -1.63
PGAP3-206ENST00000579146 LCE4AQ5TA78 99 aa4.84□□□□□ -1.64
PGAP3-206ENST00000579146 PRM1P04553 51 aa4.83□□□□□ -1.64
PGAP3-206ENST00000579146 MT4P47944 62 aa4.83□□□□□ -1.64
PGAP3-206ENST00000579146 KRTAP20-2Q3LI61 65 aa4.77□□□□□ -1.65
PGAP3-206ENST00000579146 HMCN1Q96RW7 5635 aa4.72□□□□□ -1.65
PGAP3-206ENST00000579146 KRTAP5-2Q701N4 177 aa4.72□□□□□ -1.65
PGAP3-206ENST00000579146 KRTAP2-2Q9BYT5 123 aa4.7□□□□□ -1.66
PGAP3-206ENST00000579146 LCE1DQ5T752 114 aa4.63□□□□□ -1.67
PGAP3-206ENST00000579146 KRTAP20-1Q3LI63 56 aa4.6□□□□□ -1.67
PGAP3-206ENST00000579146 KRTAP5-3Q6L8H2 238 aa4.57□□□□□ -1.68
PGAP3-206ENST00000579146 LCE1EQ5T753 118 aa4.25□□□□□ -1.73
PGAP3-206ENST00000579146 MUC5ACP98088 5654 aa4.25□□□□□ -1.73
PGAP3-206ENST00000579146 LCE1BQ5T7P3 118 aa4.09□□□□□ -1.76
PGAP3-206ENST00000579146 KRTAP5-10Q6L8G5 202 aa4.04□□□□□ -1.76
PGAP3-206ENST00000579146 KRTAP5-1Q6L8H4 278 aa4.03□□□□□ -1.76
PGAP3-206ENST00000579146 KRTAP4-2Q9BYR5 136 aa4.01□□□□□ -1.77
PGAP3-206ENST00000579146 KRTAP4-11Q9BYQ6 195 aa4□□□□□ -1.77
PGAP3-206ENST00000579146 LCE1CQ5T751 118 aa3.99□□□□□ -1.77
PGAP3-206ENST00000579146 AHNAK2Q8IVF2 5795 aa3.88□□□□□ -1.79
PGAP3-206ENST00000579146 KRTAP5-8O75690 187 aa3.85□□□□□ -1.79
PGAP3-206ENST00000579146 KRTAP5-7Q6L8G8 165 aa3.78□□□□□ -1.8
PGAP3-206ENST00000579146 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.78□□□□□ -1.8
PGAP3-206ENST00000579146 KRTAP21-2Q3LI59 83 aa3.68□□□□□ -1.82
PGAP3-206ENST00000579146 KRTAP5-11Q6L8G4 156 aa3.47□□□□□ -1.85
PGAP3-206ENST00000579146 MUC5BQ9HC84 5762 aaPredicted RBP3.4□□□□□ -1.86
PGAP3-206ENST00000579146 GPR98Q8WXG9 6306 aa3.35□□□□□ -1.87
PGAP3-206ENST00000579146 LCE1FQ5T754 118 aa3.34□□□□□ -1.87
PGAP3-206ENST00000579146 KRTAP9-9Q9BYP9 154 aa3.3□□□□□ -1.88
PGAP3-206ENST00000579146 KRTAP4-4Q9BYR3 166 aa3.29□□□□□ -1.88
PGAP3-206ENST00000579146 KRTAP4-12Q9BQ66 201 aa3.24□□□□□ -1.89
PGAP3-206ENST00000579146 KRTAP21-1Q3LI58 79 aa3.15□□□□□ -1.9
PGAP3-206ENST00000579146 PHGR1C9JFL3 82 aa2.99□□□□□ -1.93
PGAP3-206ENST00000579146 MUC19Q7Z5P9 8384 aa2.98□□□□□ -1.93
PGAP3-206ENST00000579146 AHNAKQ09666 5890 aaKnown RBP2.73□□□□□ -1.97
PGAP3-206ENST00000579146 MUC16Q8WXI7 14507 aa1.95□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 105 ms