RNA–Protein interactions for RNA: ENST00000578593.1

DDX42-207, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 2,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-207ENST00000578593 KRTAP2-1Q9BYU5 128 aa2.72□□□□□ -1.97
DDX42-207ENST00000578593 FCGBPQ9Y6R7 5405 aaPredicted RBP2.71□□□□□ -1.98
DDX42-207ENST00000578593 KRTAP10-7P60409 375 aaPredicted RBP2.7□□□□□ -1.98
DDX42-207ENST00000578593 KRTAP19-8Q3LI54 63 aa2.7□□□□□ -1.98
DDX42-207ENST00000578593 MT1BP07438 61 aa2.69□□□□□ -1.98
DDX42-207ENST00000578593 LCE1AQ5T7P2 110 aa2.69□□□□□ -1.98
DDX42-207ENST00000578593 MACF1Q9UPN3 7388 aaKnown RBP2.68□□□□□ -1.98
DDX42-207ENST00000578593 KRTAP6-3Q3LI67 103 aa2.68□□□□□ -1.98
DDX42-207ENST00000578593 KRTAP9-4Q9BYQ2 154 aa2.67□□□□□ -1.98
DDX42-207ENST00000578593 LCE3CQ5T5A8 94 aa2.65□□□□□ -1.98
DDX42-207ENST00000578593 KRTAP9-6A8MVA2 160 aa2.62□□□□□ -1.99
DDX42-207ENST00000578593 KRTAP19-5Q3LI72 72 aa2.62□□□□□ -1.99
DDX42-207ENST00000578593 LCE1FQ5T754 118 aa2.61□□□□□ -1.99
DDX42-207ENST00000578593 KMT2DO14686 5537 aa2.6□□□□□ -1.99
DDX42-207ENST00000578593 KRTAP9-9Q9BYP9 154 aa2.6□□□□□ -1.99
DDX42-207ENST00000578593 LCE1EQ5T753 118 aa2.59□□□□□ -1.99
DDX42-207ENST00000578593 LCE3BQ5TA77 95 aa2.58□□□□□ -2
DDX42-207ENST00000578593 KRTAP9-3Q9BYQ3 159 aa2.58□□□□□ -2
DDX42-207ENST00000578593 KRTAP4-2Q9BYR5 136 aa2.56□□□□□ -2
DDX42-207ENST00000578593 KRTAP4-9Q9BYQ8 210 aa2.55□□□□□ -2
DDX42-207ENST00000578593 KRTAP12-4P60329 112 aa2.55□□□□□ -2
DDX42-207ENST00000578593 LCE4AQ5TA78 99 aa2.55□□□□□ -2
DDX42-207ENST00000578593 GPR98Q8WXG9 6306 aa2.53□□□□□ -2
DDX42-207ENST00000578593 NEBP20929 6669 aa2.52□□□□□ -2.01
DDX42-207ENST00000578593 LCE1DQ5T752 114 aa2.5□□□□□ -2.01
DDX42-207ENST00000578593 KRTAP19-6Q3LI70 58 aa2.49□□□□□ -2.01
DDX42-207ENST00000578593 MUC12Q9UKN1 5478 aa2.48□□□□□ -2.01
DDX42-207ENST00000578593 KRTAP19-7Q3SYF9 63 aa2.44□□□□□ -2.02
DDX42-207ENST00000578593 KRTAP4-12Q9BQ66 201 aa2.43□□□□□ -2.02
DDX42-207ENST00000578593 KRTAP20-1Q3LI63 56 aa2.43□□□□□ -2.02
DDX42-207ENST00000578593 MDN1Q9NU22 5596 aa2.38□□□□□ -2.03
DDX42-207ENST00000578593 MT1LQ93083 61 aa2.38□□□□□ -2.03
DDX42-207ENST00000578593 MT3P25713 68 aa2.35□□□□□ -2.03
DDX42-207ENST00000578593 PRM1P04553 51 aa2.34□□□□□ -2.03
DDX42-207ENST00000578593 MT1EP04732 61 aa2.34□□□□□ -2.04
DDX42-207ENST00000578593 HMCN1Q96RW7 5635 aa2.33□□□□□ -2.04
DDX42-207ENST00000578593 LCE3EQ5T5B0 92 aa2.31□□□□□ -2.04
DDX42-207ENST00000578593 KRTAP5-9P26371 169 aa2.3□□□□□ -2.04
DDX42-207ENST00000578593 KRTAP4-11Q9BYQ6 195 aa2.28□□□□□ -2.04
DDX42-207ENST00000578593 KRTAP4-3Q9BYR4 195 aa2.28□□□□□ -2.04
DDX42-207ENST00000578593 MT1GP13640 62 aa2.27□□□□□ -2.05
DDX42-207ENST00000578593 SYNE1Q8NF91 8797 aaKnown RBP2.25□□□□□ -2.05
DDX42-207ENST00000578593 MT1AP04731 61 aa2.24□□□□□ -2.05
DDX42-207ENST00000578593 SPRR2EP22531 72 aa2.24□□□□□ -2.05
DDX42-207ENST00000578593 SPRR2BP35325 72 aa2.24□□□□□ -2.05
DDX42-207ENST00000578593 SPRR2AP35326 72 aa2.24□□□□□ -2.05
DDX42-207ENST00000578593 KRTAP5-5Q701N2 237 aaPredicted RBP2.24□□□□□ -2.05
DDX42-207ENST00000578593 SPRR2FQ96RM1 72 aa2.24□□□□□ -2.05
DDX42-207ENST00000578593 DSTQ03001 7570 aaKnown RBP2.21□□□□□ -2.06
DDX42-207ENST00000578593 MUC5BQ9HC84 5762 aaPredicted RBP2.19□□□□□ -2.06
DDX42-207ENST00000578593 MT1MQ8N339 61 aa2.17□□□□□ -2.06
DDX42-207ENST00000578593 SPRR2DP22532 72 aa2.16□□□□□ -2.06
DDX42-207ENST00000578593 LCE3DQ9BYE3 92 aa2.14□□□□□ -2.07
DDX42-207ENST00000578593 KRTAP19-3Q7Z4W3 81 aa2.13□□□□□ -2.07
DDX42-207ENST00000578593 OBSCNQ5VST9 7968 aa2.08□□□□□ -2.08
DDX42-207ENST00000578593 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.07□□□□□ -2.08
DDX42-207ENST00000578593 AHNAKQ09666 5890 aaKnown RBP2.05□□□□□ -2.08
DDX42-207ENST00000578593 KRTAP6-2Q3LI66 62 aa2.05□□□□□ -2.08
DDX42-207ENST00000578593 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
DDX42-207ENST00000578593 KRTAP6-1Q3LI64 71 aa2.04□□□□□ -2.08
DDX42-207ENST00000578593 AHNAK2Q8IVF2 5795 aa2.03□□□□□ -2.08
DDX42-207ENST00000578593 KRTAP5-7Q6L8G8 165 aa2.02□□□□□ -2.09
DDX42-207ENST00000578593 MT4P47944 62 aa1.95□□□□□ -2.1
DDX42-207ENST00000578593 KRTAP5-10Q6L8G5 202 aa1.91□□□□□ -2.1
DDX42-207ENST00000578593 KRTAP5-4Q6L8H1 288 aa1.79□□□□□ -2.12
DDX42-207ENST00000578593 KRTAP20-2Q3LI61 65 aa1.73□□□□□ -2.13
DDX42-207ENST00000578593 LCE1CQ5T751 118 aa1.71□□□□□ -2.14
DDX42-207ENST00000578593 LCE1BQ5T7P3 118 aa1.71□□□□□ -2.14
DDX42-207ENST00000578593 MUC5ACP98088 5654 aa1.71□□□□□ -2.14
DDX42-207ENST00000578593 KRTAP5-8O75690 187 aa1.6□□□□□ -2.15
DDX42-207ENST00000578593 KRTAP21-1Q3LI58 79 aa1.6□□□□□ -2.15
DDX42-207ENST00000578593 KRTAP5-2Q701N4 177 aa1.58□□□□□ -2.16
DDX42-207ENST00000578593 KRTAP4-4Q9BYR3 166 aa1.56□□□□□ -2.16
DDX42-207ENST00000578593 KRTAP5-1Q6L8H4 278 aa1.51□□□□□ -2.17
DDX42-207ENST00000578593 KRTAP5-11Q6L8G4 156 aa1.46□□□□□ -2.17
DDX42-207ENST00000578593 KRTAP21-2Q3LI59 83 aa1.3□□□□□ -2.2
DDX42-207ENST00000578593 PHGR1C9JFL3 82 aa1.16□□□□□ -2.22
DDX42-207ENST00000578593 MUC16Q8WXI7 14507 aa0.79□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 125.6 ms