RNA–Protein interactions for RNA: ENST00000578502.1

ERBB2-207, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5

Gene ERBB2, Length 497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-207ENST00000578502 TNP1P09430 55 aa3.78□□□□□ -1.8
ERBB2-207ENST00000578502 MT1LQ93083 61 aa3.76□□□□□ -1.81
ERBB2-207ENST00000578502 MT1GP13640 62 aa3.75□□□□□ -1.81
ERBB2-207ENST00000578502 MT1MQ8N339 61 aa3.74□□□□□ -1.81
ERBB2-207ENST00000578502 MIR22HGQ0VDD5 57 aa3.73□□□□□ -1.81
ERBB2-207ENST00000578502 PSPHP1O15172 72 aa3.72□□□□□ -1.81
ERBB2-207ENST00000578502 BRK1Q8WUW1 75 aa3.72□□□□□ -1.81
ERBB2-207ENST00000578502 KRTAP4-3Q9BYR4 195 aa3.72□□□□□ -1.81
ERBB2-207ENST00000578502 GPR98Q8WXG9 6306 aa3.72□□□□□ -1.81
ERBB2-207ENST00000578502 KRTAP4-9Q9BYQ8 210 aa3.7□□□□□ -1.82
ERBB2-207ENST00000578502 PP632Q6XCG6 107 aa3.68□□□□□ -1.82
ERBB2-207ENST00000578502 HMCN1Q96RW7 5635 aa3.68□□□□□ -1.82
ERBB2-207ENST00000578502 KRTAP12-3P60328 96 aa3.65□□□□□ -1.83
ERBB2-207ENST00000578502 KRTAP4-7Q9BYR0 210 aa3.65□□□□□ -1.83
ERBB2-207ENST00000578502 A6NED7 52 aa3.64□□□□□ -1.83
ERBB2-207ENST00000578502 CDC42SE1Q9NRR8 79 aa3.64□□□□□ -1.83
ERBB2-207ENST00000578502 KRTAP25-1Q3LHN0 102 aa3.59□□□□□ -1.83
ERBB2-207ENST00000578502 K7ERS5 55 aa3.58□□□□□ -1.84
ERBB2-207ENST00000578502 LCE1DQ5T752 114 aa3.58□□□□□ -1.84
ERBB2-207ENST00000578502 MT4P47944 62 aa3.56□□□□□ -1.84
ERBB2-207ENST00000578502 AHNAK2Q8IVF2 5795 aa3.55□□□□□ -1.84
ERBB2-207ENST00000578502 PMAIP1Q13794 54 aa3.54□□□□□ -1.84
ERBB2-207ENST00000578502 LCE4AQ5TA78 99 aa3.53□□□□□ -1.84
ERBB2-207ENST00000578502 KRTAP5-4Q6L8H1 288 aa3.51□□□□□ -1.85
ERBB2-207ENST00000578502 KTN1-AS1Q86SY8 53 aa3.48□□□□□ -1.85
ERBB2-207ENST00000578502 KRTAP4-6Q9BYQ5 205 aa3.48□□□□□ -1.85
ERBB2-207ENST00000578502 LOC100996750A0A140TA64 210 aa3.45□□□□□ -1.86
ERBB2-207ENST00000578502 KRTAP23-1A1A580 65 aa3.43□□□□□ -1.86
ERBB2-207ENST00000578502 KRTAP5-5Q701N2 237 aaPredicted RBP3.42□□□□□ -1.86
ERBB2-207ENST00000578502 ROMO1P60602 79 aa3.41□□□□□ -1.86
ERBB2-207ENST00000578502 KRTAP15-1Q3LI76 137 aa3.41□□□□□ -1.86
ERBB2-207ENST00000578502 SYNE1Q8NF91 8797 aaKnown RBP3.39□□□□□ -1.87
ERBB2-207ENST00000578502 LCE3CQ5T5A8 94 aa3.37□□□□□ -1.87
ERBB2-207ENST00000578502 KRTAP20-2Q3LI61 65 aa3.32□□□□□ -1.88
ERBB2-207ENST00000578502 KRTAP19-4Q3LI73 84 aa3.32□□□□□ -1.88
ERBB2-207ENST00000578502 KRTAP5-10Q6L8G5 202 aa3.29□□□□□ -1.88
ERBB2-207ENST00000578502 SPRR5A0A1B0GTR4 108 aa3.27□□□□□ -1.89
ERBB2-207ENST00000578502 KRTAP12-4P60329 112 aa3.26□□□□□ -1.89
ERBB2-207ENST00000578502 KRTAP9-6A8MVA2 160 aa3.24□□□□□ -1.89
ERBB2-207ENST00000578502 KRTAP5-3Q6L8H2 238 aa3.23□□□□□ -1.89
ERBB2-207ENST00000578502 PRAC1Q96KF2 57 aa3.21□□□□□ -1.9
ERBB2-207ENST00000578502 KRTAP6-1Q3LI64 71 aa3.2□□□□□ -1.9
ERBB2-207ENST00000578502 MT1AP04731 61 aa3.18□□□□□ -1.9
ERBB2-207ENST00000578502 KRTAP5-7Q6L8G8 165 aa3.13□□□□□ -1.91
ERBB2-207ENST00000578502 KRTAP5-2Q701N4 177 aa3.09□□□□□ -1.91
ERBB2-207ENST00000578502 KRTAP9-4Q9BYQ2 154 aa3.08□□□□□ -1.92
ERBB2-207ENST00000578502 KRTAP6-2Q3LI66 62 aa3.04□□□□□ -1.92
ERBB2-207ENST00000578502 KRTAP4-11Q9BYQ6 195 aa3.01□□□□□ -1.93
ERBB2-207ENST00000578502 OBSCNQ5VST9 7968 aa2.98□□□□□ -1.93
ERBB2-207ENST00000578502 AHNAKQ09666 5890 aaKnown RBP2.97□□□□□ -1.93
ERBB2-207ENST00000578502 MUC5BQ9HC84 5762 aaPredicted RBP2.95□□□□□ -1.94
ERBB2-207ENST00000578502 MUC5ACP98088 5654 aa2.95□□□□□ -1.94
ERBB2-207ENST00000578502 KRTAP5-8O75690 187 aa2.92□□□□□ -1.94
ERBB2-207ENST00000578502 MT3P25713 68 aa2.89□□□□□ -1.95
ERBB2-207ENST00000578502 KRTAP5-1Q6L8H4 278 aa2.77□□□□□ -1.97
ERBB2-207ENST00000578502 KRTAP9-9Q9BYP9 154 aa2.72□□□□□ -1.97
ERBB2-207ENST00000578502 LUZP6Q538Z0 58 aa2.7□□□□□ -1.98
ERBB2-207ENST00000578502 NDUFAF8A1L188 74 aa2.68□□□□□ -1.98
ERBB2-207ENST00000578502 H3BS24 57 aa2.66□□□□□ -1.98
ERBB2-207ENST00000578502 LCE1EQ5T753 118 aa2.62□□□□□ -1.99
ERBB2-207ENST00000578502 LCE1BQ5T7P3 118 aa2.53□□□□□ -2
ERBB2-207ENST00000578502 KRTAP4-2Q9BYR5 136 aa2.53□□□□□ -2
ERBB2-207ENST00000578502 A0A0A0MQY5 61 aa2.49□□□□□ -2.01
ERBB2-207ENST00000578502 LCE1CQ5T751 118 aa2.44□□□□□ -2.02
ERBB2-207ENST00000578502 LCE3DQ9BYE3 92 aa2.42□□□□□ -2.02
ERBB2-207ENST00000578502 INE1O15225 51 aa2.33□□□□□ -2.04
ERBB2-207ENST00000578502 KRTAP4-12Q9BQ66 201 aa2.32□□□□□ -2.04
ERBB2-207ENST00000578502 LCE3EQ5T5B0 92 aa2.28□□□□□ -2.04
ERBB2-207ENST00000578502 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.23□□□□□ -2.05
ERBB2-207ENST00000578502 KRTAP5-11Q6L8G4 156 aa2.2□□□□□ -2.06
ERBB2-207ENST00000578502 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
ERBB2-207ENST00000578502 LCE1FQ5T754 118 aa2.1□□□□□ -2.07
ERBB2-207ENST00000578502 KRTAP4-4Q9BYR3 166 aa1.97□□□□□ -2.09
ERBB2-207ENST00000578502 PHGR1C9JFL3 82 aa1.92□□□□□ -2.1
ERBB2-207ENST00000578502 MUC19Q7Z5P9 8384 aa1.85□□□□□ -2.11
ERBB2-207ENST00000578502 PRM1P04553 51 aa1.77□□□□□ -2.13
ERBB2-207ENST00000578502 KRTAP21-1Q3LI58 79 aa1.41□□□□□ -2.18
ERBB2-207ENST00000578502 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 30.1 ms