RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 KMT2DO14686 5537 aa3.99□□□□□ -1.77
ERBB2-206ENST00000578373 MT1LQ93083 61 aa3.98□□□□□ -1.77
ERBB2-206ENST00000578373 SPRR2EP22531 72 aa3.98□□□□□ -1.77
ERBB2-206ENST00000578373 SPRR2BP35325 72 aa3.98□□□□□ -1.77
ERBB2-206ENST00000578373 SPRR2AP35326 72 aa3.98□□□□□ -1.77
ERBB2-206ENST00000578373 KRTAP4-3Q9BYR4 195 aa3.97□□□□□ -1.77
ERBB2-206ENST00000578373 LOC100996750A0A140TA64 210 aa3.96□□□□□ -1.78
ERBB2-206ENST00000578373 MT1EP04732 61 aa3.94□□□□□ -1.78
ERBB2-206ENST00000578373 SYNE2Q8WXH0 6885 aaKnown RBP3.89□□□□□ -1.79
ERBB2-206ENST00000578373 KRTAP19-3Q7Z4W3 81 aa3.87□□□□□ -1.79
ERBB2-206ENST00000578373 KRTAP19-7Q3SYF9 63 aa3.86□□□□□ -1.79
ERBB2-206ENST00000578373 KRTAP9-2Q9BYQ4 174 aa3.85□□□□□ -1.79
ERBB2-206ENST00000578373 LCE3DQ9BYE3 92 aa3.83□□□□□ -1.8
ERBB2-206ENST00000578373 SPRR2DP22532 72 aa3.82□□□□□ -1.8
ERBB2-206ENST00000578373 KRTAP9-6A8MVA2 160 aa3.8□□□□□ -1.8
ERBB2-206ENST00000578373 MT1MQ8N339 61 aa3.78□□□□□ -1.8
ERBB2-206ENST00000578373 LCE3EQ5T5B0 92 aa3.76□□□□□ -1.81
ERBB2-206ENST00000578373 KRTAP4-9Q9BYQ8 210 aa3.73□□□□□ -1.81
ERBB2-206ENST00000578373 SSPOA2VEC9 5147 aa3.73□□□□□ -1.81
ERBB2-206ENST00000578373 KRTAP19-6Q3LI70 58 aa3.73□□□□□ -1.81
ERBB2-206ENST00000578373 MUC12Q9UKN1 5478 aa3.7□□□□□ -1.82
ERBB2-206ENST00000578373 MACF1Q9UPN3 7388 aaKnown RBP3.63□□□□□ -1.83
ERBB2-206ENST00000578373 KRTAP2-3P0C7H8 128 aa3.62□□□□□ -1.83
ERBB2-206ENST00000578373 KRTAP2-4Q9BYR9 128 aa3.62□□□□□ -1.83
ERBB2-206ENST00000578373 KRTAP2-1Q9BYU5 128 aa3.62□□□□□ -1.83
ERBB2-206ENST00000578373 LCE2DQ5TA82 110 aaPredicted RBP3.61□□□□□ -1.83
ERBB2-206ENST00000578373 PRM1P04553 51 aa3.58□□□□□ -1.84
ERBB2-206ENST00000578373 KRTAP9-6A0A140TA67 174 aa3.53□□□□□ -1.84
ERBB2-206ENST00000578373 MT3P25713 68 aa3.5□□□□□ -1.85
ERBB2-206ENST00000578373 MT4P47944 62 aa3.5□□□□□ -1.85
ERBB2-206ENST00000578373 KRTAP6-1Q3LI64 71 aa3.43□□□□□ -1.86
ERBB2-206ENST00000578373 MT1AP04731 61 aa3.41□□□□□ -1.86
ERBB2-206ENST00000578373 LCE1BQ5T7P3 118 aa3.37□□□□□ -1.87
ERBB2-206ENST00000578373 LCE1DQ5T752 114 aa3.37□□□□□ -1.87
ERBB2-206ENST00000578373 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.36□□□□□ -1.87
ERBB2-206ENST00000578373 LCE5AQ5TCM9 118 aa3.35□□□□□ -1.87
ERBB2-206ENST00000578373 MDN1Q9NU22 5596 aa3.33□□□□□ -1.88
ERBB2-206ENST00000578373 KRTAP9-7A8MTY7 169 aa3.32□□□□□ -1.88
ERBB2-206ENST00000578373 MUC19Q7Z5P9 8384 aa3.31□□□□□ -1.88
ERBB2-206ENST00000578373 KRTAP6-2Q3LI66 62 aa3.28□□□□□ -1.88
ERBB2-206ENST00000578373 LCE1AQ5T7P2 110 aa3.26□□□□□ -1.89
ERBB2-206ENST00000578373 KRTAP6-3Q3LI67 103 aa3.2□□□□□ -1.9
ERBB2-206ENST00000578373 KRTAP9-4Q9BYQ2 154 aa3.14□□□□□ -1.91
ERBB2-206ENST00000578373 KRTAP20-1Q3LI63 56 aa3.07□□□□□ -1.92
ERBB2-206ENST00000578373 KRTAP5-9P26371 169 aa3.02□□□□□ -1.93
ERBB2-206ENST00000578373 NEBP20929 6669 aa3□□□□□ -1.93
ERBB2-206ENST00000578373 LCE4AQ5TA78 99 aa2.96□□□□□ -1.94
ERBB2-206ENST00000578373 KRTAP2-2Q9BYT5 123 aa2.96□□□□□ -1.94
ERBB2-206ENST00000578373 KRTAP4-6Q9BYQ5 205 aa2.86□□□□□ -1.95
ERBB2-206ENST00000578373 KRTAP5-5Q701N2 237 aaPredicted RBP2.79□□□□□ -1.96
ERBB2-206ENST00000578373 MUC5ACP98088 5654 aa2.75□□□□□ -1.97
ERBB2-206ENST00000578373 KRTAP4-11Q9BYQ6 195 aa2.74□□□□□ -1.97
ERBB2-206ENST00000578373 LCE1CQ5T751 118 aa2.74□□□□□ -1.97
ERBB2-206ENST00000578373 LCE1EQ5T753 118 aa2.74□□□□□ -1.97
ERBB2-206ENST00000578373 LCE1FQ5T754 118 aa2.74□□□□□ -1.97
ERBB2-206ENST00000578373 GPR98Q8WXG9 6306 aa2.66□□□□□ -1.98
ERBB2-206ENST00000578373 HMCN1Q96RW7 5635 aa2.65□□□□□ -1.98
ERBB2-206ENST00000578373 KRTAP20-2Q3LI61 65 aa2.65□□□□□ -1.98
ERBB2-206ENST00000578373 KRTAP4-4Q9BYR3 166 aa2.56□□□□□ -2
ERBB2-206ENST00000578373 KRTAP9-9Q9BYP9 154 aa2.47□□□□□ -2.01
ERBB2-206ENST00000578373 KRTAP4-12Q9BQ66 201 aa2.45□□□□□ -2.02
ERBB2-206ENST00000578373 KRTAP4-2Q9BYR5 136 aa2.45□□□□□ -2.02
ERBB2-206ENST00000578373 KRTAP5-4Q6L8H1 288 aa2.42□□□□□ -2.02
ERBB2-206ENST00000578373 AHNAK2Q8IVF2 5795 aa2.31□□□□□ -2.04
ERBB2-206ENST00000578373 KRTAP5-3Q6L8H2 238 aa2.28□□□□□ -2.04
ERBB2-206ENST00000578373 KRTAP5-2Q701N4 177 aa2.16□□□□□ -2.06
ERBB2-206ENST00000578373 KRTAP5-10Q6L8G5 202 aa2.14□□□□□ -2.07
ERBB2-206ENST00000578373 MUC5BQ9HC84 5762 aaPredicted RBP2.13□□□□□ -2.07
ERBB2-206ENST00000578373 KRTAP5-8O75690 187 aa2.13□□□□□ -2.07
ERBB2-206ENST00000578373 KRTAP5-1Q6L8H4 278 aa1.98□□□□□ -2.09
ERBB2-206ENST00000578373 AHNAKQ09666 5890 aaKnown RBP1.94□□□□□ -2.1
ERBB2-206ENST00000578373 KRTAP21-2Q3LI59 83 aa1.86□□□□□ -2.11
ERBB2-206ENST00000578373 KRTAP5-11Q6L8G4 156 aa1.77□□□□□ -2.13
ERBB2-206ENST00000578373 KRTAP5-7Q6L8G8 165 aa1.67□□□□□ -2.14
ERBB2-206ENST00000578373 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.63□□□□□ -2.15
ERBB2-206ENST00000578373 KRTAP21-1Q3LI58 79 aa1.63□□□□□ -2.15
ERBB2-206ENST00000578373 PHGR1C9JFL3 82 aa1.62□□□□□ -2.15
ERBB2-206ENST00000578373 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 35.4 ms