RNA–Protein interactions for RNA: ENST00000578240.1

CTC1-203, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-203ENST00000578240 KRTAP19-5Q3LI72 72 aa4.91□□□□□ -1.62
CTC1-203ENST00000578240 KRTAP19-7Q3SYF9 63 aa4.91□□□□□ -1.62
CTC1-203ENST00000578240 MDN1Q9NU22 5596 aa4.9□□□□□ -1.62
CTC1-203ENST00000578240 SPRR2FQ96RM1 72 aa4.87□□□□□ -1.63
CTC1-203ENST00000578240 KRTAP12-3P60328 96 aa4.86□□□□□ -1.63
CTC1-203ENST00000578240 MT1EP04732 61 aa4.8□□□□□ -1.64
CTC1-203ENST00000578240 KRTAP2-3P0C7H8 128 aa4.8□□□□□ -1.64
CTC1-203ENST00000578240 SPRR2EP22531 72 aa4.8□□□□□ -1.64
CTC1-203ENST00000578240 SPRR2BP35325 72 aa4.8□□□□□ -1.64
CTC1-203ENST00000578240 SPRR2AP35326 72 aa4.8□□□□□ -1.64
CTC1-203ENST00000578240 KRTAP2-4Q9BYR9 128 aa4.8□□□□□ -1.64
CTC1-203ENST00000578240 KRTAP15-1Q3LI76 137 aa4.73□□□□□ -1.65
CTC1-203ENST00000578240 LCE1AQ5T7P2 110 aa4.71□□□□□ -1.66
CTC1-203ENST00000578240 MT1LQ93083 61 aa4.7□□□□□ -1.66
CTC1-203ENST00000578240 SPRR2DP22532 72 aa4.65□□□□□ -1.66
CTC1-203ENST00000578240 KRTAP2-2Q9BYT5 123 aa4.64□□□□□ -1.67
CTC1-203ENST00000578240 KRTAP2-1Q9BYU5 128 aa4.64□□□□□ -1.67
CTC1-203ENST00000578240 KRTAP19-3Q7Z4W3 81 aa4.61□□□□□ -1.67
CTC1-203ENST00000578240 KRTAP19-4Q3LI73 84 aa4.57□□□□□ -1.68
CTC1-203ENST00000578240 KRTAP4-7Q9BYR0 210 aa4.57□□□□□ -1.68
CTC1-203ENST00000578240 LCE5AQ5TCM9 118 aa4.56□□□□□ -1.68
CTC1-203ENST00000578240 LCE3CQ5T5A8 94 aa4.54□□□□□ -1.68
CTC1-203ENST00000578240 MT1GP13640 62 aa4.53□□□□□ -1.68
CTC1-203ENST00000578240 MT1MQ8N339 61 aa4.53□□□□□ -1.68
CTC1-203ENST00000578240 LCE3BQ5TA77 95 aa4.52□□□□□ -1.69
CTC1-203ENST00000578240 SPRR5A0A1B0GTR4 108 aa4.51□□□□□ -1.69
CTC1-203ENST00000578240 KRTAP4-12Q9BQ66 201 aa4.48□□□□□ -1.69
CTC1-203ENST00000578240 KRTAP4-3Q9BYR4 195 aa4.47□□□□□ -1.69
CTC1-203ENST00000578240 KRTAP9-6A8MVA2 160 aa4.4□□□□□ -1.71
CTC1-203ENST00000578240 KRTAP9-9Q9BYP9 154 aa4.38□□□□□ -1.71
CTC1-203ENST00000578240 KRTAP9-4Q9BYQ2 154 aa4.38□□□□□ -1.71
CTC1-203ENST00000578240 DSTQ03001 7570 aaKnown RBP4.37□□□□□ -1.71
CTC1-203ENST00000578240 LUZP6Q538Z0 58 aa4.27□□□□□ -1.73
CTC1-203ENST00000578240 KRTAP4-9Q9BYQ8 210 aa4.19□□□□□ -1.74
CTC1-203ENST00000578240 LCE1DQ5T752 114 aa4.16□□□□□ -1.74
CTC1-203ENST00000578240 KRTAP5-5Q701N2 237 aaPredicted RBP4.13□□□□□ -1.75
CTC1-203ENST00000578240 LCE4AQ5TA78 99 aa4.11□□□□□ -1.75
CTC1-203ENST00000578240 GPR98Q8WXG9 6306 aa4.08□□□□□ -1.76
CTC1-203ENST00000578240 NDUFAF8A1L188 74 aa4.07□□□□□ -1.76
CTC1-203ENST00000578240 MT4P47944 62 aa4.06□□□□□ -1.76
CTC1-203ENST00000578240 HMCN1Q96RW7 5635 aa4.02□□□□□ -1.77
CTC1-203ENST00000578240 KRTAP5-4Q6L8H1 288 aa4□□□□□ -1.77
CTC1-203ENST00000578240 KRTAP4-2Q9BYR5 136 aa3.98□□□□□ -1.77
CTC1-203ENST00000578240 MT1AP04731 61 aa3.97□□□□□ -1.77
CTC1-203ENST00000578240 KRTAP6-1Q3LI64 71 aa3.97□□□□□ -1.77
CTC1-203ENST00000578240 SYNE1Q8NF91 8797 aaKnown RBP3.95□□□□□ -1.78
CTC1-203ENST00000578240 KRTAP4-11Q9BYQ6 195 aa3.9□□□□□ -1.78
CTC1-203ENST00000578240 AHNAK2Q8IVF2 5795 aa3.9□□□□□ -1.79
CTC1-203ENST00000578240 KRTAP5-10Q6L8G5 202 aa3.87□□□□□ -1.79
CTC1-203ENST00000578240 KRTAP20-2Q3LI61 65 aa3.79□□□□□ -1.8
CTC1-203ENST00000578240 KRTAP12-4P60329 112 aa3.78□□□□□ -1.81
CTC1-203ENST00000578240 KRTAP5-7Q6L8G8 165 aa3.76□□□□□ -1.81
CTC1-203ENST00000578240 KRTAP5-3Q6L8H2 238 aa3.76□□□□□ -1.81
CTC1-203ENST00000578240 KRTAP6-2Q3LI66 62 aa3.65□□□□□ -1.83
CTC1-203ENST00000578240 KRTAP5-2Q701N4 177 aa3.6□□□□□ -1.83
CTC1-203ENST00000578240 MT3P25713 68 aa3.55□□□□□ -1.84
CTC1-203ENST00000578240 OBSCNQ5VST9 7968 aa3.41□□□□□ -1.86
CTC1-203ENST00000578240 INE1O15225 51 aa3.36□□□□□ -1.87
CTC1-203ENST00000578240 LCE3DQ9BYE3 92 aa3.36□□□□□ -1.87
CTC1-203ENST00000578240 KRTAP5-8O75690 187 aa3.34□□□□□ -1.87
CTC1-203ENST00000578240 LCE3EQ5T5B0 92 aa3.27□□□□□ -1.89
CTC1-203ENST00000578240 MUC5ACP98088 5654 aa3.19□□□□□ -1.9
CTC1-203ENST00000578240 AHNAKQ09666 5890 aaKnown RBP3.19□□□□□ -1.9
CTC1-203ENST00000578240 MUC5BQ9HC84 5762 aaPredicted RBP3.17□□□□□ -1.9
CTC1-203ENST00000578240 KRTAP5-1Q6L8H4 278 aa3.14□□□□□ -1.91
CTC1-203ENST00000578240 LCE1EQ5T753 118 aa3.12□□□□□ -1.91
CTC1-203ENST00000578240 LCE1CQ5T751 118 aa2.92□□□□□ -1.94
CTC1-203ENST00000578240 LCE1BQ5T7P3 118 aa2.92□□□□□ -1.94
CTC1-203ENST00000578240 LCE1FQ5T754 118 aa2.85□□□□□ -1.95
CTC1-203ENST00000578240 PRM1P04553 51 aa2.84□□□□□ -1.95
CTC1-203ENST00000578240 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.76□□□□□ -1.97
CTC1-203ENST00000578240 KRTAP5-11Q6L8G4 156 aa2.63□□□□□ -1.99
CTC1-203ENST00000578240 KRTAP21-2Q3LI59 83 aa2.61□□□□□ -1.99
CTC1-203ENST00000578240 KRTAP4-4Q9BYR3 166 aa2.31□□□□□ -2.04
CTC1-203ENST00000578240 PHGR1C9JFL3 82 aa2.26□□□□□ -2.05
CTC1-203ENST00000578240 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
CTC1-203ENST00000578240 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
CTC1-203ENST00000578240 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 6.7 ms