RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 TNP1P09430 55 aa5.89□□□□□ -1.47
SREBF1-217ENST00000577897 PP632Q6XCG6 107 aa5.86□□□□□ -1.47
SREBF1-217ENST00000577897 LCE3BQ5TA77 95 aa5.82□□□□□ -1.48
SREBF1-217ENST00000577897 KRTAP8-1Q8IUC2 63 aa5.82□□□□□ -1.48
SREBF1-217ENST00000577897 PRO2289Q9P1D8 64 aa5.81□□□□□ -1.48
SREBF1-217ENST00000577897 KRTAP23-1A1A580 65 aa5.78□□□□□ -1.48
SREBF1-217ENST00000577897 KRTAP4-12Q9BQ66 201 aa5.78□□□□□ -1.48
SREBF1-217ENST00000577897 DSTQ03001 7570 aaKnown RBP5.72□□□□□ -1.49
SREBF1-217ENST00000577897 MT1XP80297 61 aa5.62□□□□□ -1.51
SREBF1-217ENST00000577897 KRTAP9-9Q9BYP9 154 aa5.62□□□□□ -1.51
SREBF1-217ENST00000577897 KRTAP9-4Q9BYQ2 154 aa5.62□□□□□ -1.51
SREBF1-217ENST00000577897 KRTAP4-9Q9BYQ8 210 aa5.61□□□□□ -1.51
SREBF1-217ENST00000577897 KRTAP4-8A0A0G2JLE6 195 aa5.59□□□□□ -1.51
SREBF1-217ENST00000577897 KRTAP10-12P60413 245 aa5.5□□□□□ -1.53
SREBF1-217ENST00000577897 LCE3AQ5TA76 89 aa5.44□□□□□ -1.54
SREBF1-217ENST00000577897 AHNAK2Q8IVF2 5795 aa5.43□□□□□ -1.54
SREBF1-217ENST00000577897 KRTAP5-10Q6L8G5 202 aa5.41□□□□□ -1.54
SREBF1-217ENST00000577897 HMCN1Q96RW7 5635 aa5.4□□□□□ -1.54
SREBF1-217ENST00000577897 LCE1DQ5T752 114 aa5.4□□□□□ -1.54
SREBF1-217ENST00000577897 KRTAP10-7P60409 375 aaPredicted RBP5.38□□□□□ -1.55
SREBF1-217ENST00000577897 KRTAP4-7Q9BYR0 210 aa5.36□□□□□ -1.55
SREBF1-217ENST00000577897 KRTAP5-7Q6L8G8 165 aa5.32□□□□□ -1.56
SREBF1-217ENST00000577897 KRTAP15-1Q3LI76 137 aa5.3□□□□□ -1.56
SREBF1-217ENST00000577897 KRTAP12-3P60328 96 aa5.29□□□□□ -1.56
SREBF1-217ENST00000577897 MT4P47944 62 aa5.25□□□□□ -1.57
SREBF1-217ENST00000577897 LUZP6Q538Z0 58 aa5.21□□□□□ -1.58
SREBF1-217ENST00000577897 SPRR5A0A1B0GTR4 108 aa5.2□□□□□ -1.58
SREBF1-217ENST00000577897 KRTAP19-4Q3LI73 84 aa5.19□□□□□ -1.58
SREBF1-217ENST00000577897 LCE4AQ5TA78 99 aa5.18□□□□□ -1.58
SREBF1-217ENST00000577897 LCE5AQ5TCM9 118 aa5.16□□□□□ -1.58
SREBF1-217ENST00000577897 KRTAP19-5Q3LI72 72 aa5.14□□□□□ -1.59
SREBF1-217ENST00000577897 KRTAP4-2Q9BYR5 136 aa5.11□□□□□ -1.59
SREBF1-217ENST00000577897 KRTAP5-3Q6L8H2 238 aa5.1□□□□□ -1.59
SREBF1-217ENST00000577897 KRTAP19-3Q7Z4W3 81 aa5.08□□□□□ -1.6
SREBF1-217ENST00000577897 H3BS24 57 aa5.05□□□□□ -1.6
SREBF1-217ENST00000577897 KRTAP4-11Q9BYQ6 195 aa5.04□□□□□ -1.6
SREBF1-217ENST00000577897 MT1EP04732 61 aa5□□□□□ -1.61
SREBF1-217ENST00000577897 NDUFAF8A1L188 74 aa4.99□□□□□ -1.61
SREBF1-217ENST00000577897 KRTAP19-7Q3SYF9 63 aa4.99□□□□□ -1.61
SREBF1-217ENST00000577897 LCE3CQ5T5A8 94 aa4.94□□□□□ -1.62
SREBF1-217ENST00000577897 KRTAP5-4Q6L8H1 288 aa4.93□□□□□ -1.62
SREBF1-217ENST00000577897 MT1GP13640 62 aa4.87□□□□□ -1.63
SREBF1-217ENST00000577897 MT1LQ93083 61 aa4.87□□□□□ -1.63
SREBF1-217ENST00000577897 MT1MQ8N339 61 aa4.81□□□□□ -1.64
SREBF1-217ENST00000577897 KRTAP4-3Q9BYR4 195 aa4.76□□□□□ -1.65
SREBF1-217ENST00000577897 AHNAKQ09666 5890 aaKnown RBP4.73□□□□□ -1.65
SREBF1-217ENST00000577897 KRTAP20-2Q3LI61 65 aa4.72□□□□□ -1.65
SREBF1-217ENST00000577897 MUC5ACP98088 5654 aa4.63□□□□□ -1.67
SREBF1-217ENST00000577897 A0A0A0MQY5 61 aa4.62□□□□□ -1.67
SREBF1-217ENST00000577897 MUC5BQ9HC84 5762 aaPredicted RBP4.58□□□□□ -1.68
SREBF1-217ENST00000577897 KRTAP9-6A8MVA2 160 aa4.51□□□□□ -1.69
SREBF1-217ENST00000577897 KRTAP12-4P60329 112 aa4.5□□□□□ -1.69
SREBF1-217ENST00000577897 KRTAP5-5Q701N2 237 aaPredicted RBP4.43□□□□□ -1.7
SREBF1-217ENST00000577897 KRTAP5-8O75690 187 aa4.42□□□□□ -1.7
SREBF1-217ENST00000577897 SYNE1Q8NF91 8797 aaKnown RBP4.41□□□□□ -1.7
SREBF1-217ENST00000577897 INE1O15225 51 aa4.27□□□□□ -1.73
SREBF1-217ENST00000577897 MT1AP04731 61 aa4.18□□□□□ -1.74
SREBF1-217ENST00000577897 KRTAP5-2Q701N4 177 aa4.18□□□□□ -1.74
SREBF1-217ENST00000577897 OBSCNQ5VST9 7968 aa4.17□□□□□ -1.74
SREBF1-217ENST00000577897 KRTAP6-1Q3LI64 71 aa4.06□□□□□ -1.76
SREBF1-217ENST00000577897 KRTAP6-2Q3LI66 62 aa3.94□□□□□ -1.78
SREBF1-217ENST00000577897 KRTAP5-1Q6L8H4 278 aa3.9□□□□□ -1.79
SREBF1-217ENST00000577897 MT3P25713 68 aa3.85□□□□□ -1.79
SREBF1-217ENST00000577897 LCE3DQ9BYE3 92 aa3.77□□□□□ -1.81
SREBF1-217ENST00000577897 LCE3EQ5T5B0 92 aa3.7□□□□□ -1.82
SREBF1-217ENST00000577897 LCE1EQ5T753 118 aa3.45□□□□□ -1.86
SREBF1-217ENST00000577897 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.42□□□□□ -1.86
SREBF1-217ENST00000577897 LCE1BQ5T7P3 118 aa3.41□□□□□ -1.86
SREBF1-217ENST00000577897 KRTAP5-11Q6L8G4 156 aa3.39□□□□□ -1.87
SREBF1-217ENST00000577897 PRM1P04553 51 aa3.22□□□□□ -1.89
SREBF1-217ENST00000577897 LCE1CQ5T751 118 aa3.22□□□□□ -1.89
SREBF1-217ENST00000577897 PHGR1C9JFL3 82 aa3.19□□□□□ -1.9
SREBF1-217ENST00000577897 LCE1FQ5T754 118 aa3.09□□□□□ -1.91
SREBF1-217ENST00000577897 KRTAP4-4Q9BYR3 166 aa2.85□□□□□ -1.95
SREBF1-217ENST00000577897 KRTAP21-2Q3LI59 83 aa2.65□□□□□ -1.99
SREBF1-217ENST00000577897 MUC19Q7Z5P9 8384 aa2.6□□□□□ -1.99
SREBF1-217ENST00000577897 KRTAP21-1Q3LI58 79 aa2.44□□□□□ -2.02
SREBF1-217ENST00000577897 MUC16Q8WXI7 14507 aa1.81□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 70 ms