RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 SPRR2AP35326 72 aa3.54□□□□□ -1.84
RNF43-203ENST00000577716 KRTAP19-3Q7Z4W3 81 aa3.54□□□□□ -1.84
RNF43-203ENST00000577716 LCE3DQ9BYE3 92 aa3.49□□□□□ -1.85
RNF43-203ENST00000577716 KRTAP19-7Q3SYF9 63 aa3.46□□□□□ -1.86
RNF43-203ENST00000577716 USH2AO75445 5202 aa3.45□□□□□ -1.86
RNF43-203ENST00000577716 LCE3EQ5T5B0 92 aa3.44□□□□□ -1.86
RNF43-203ENST00000577716 KRTAP19-6Q3LI70 58 aa3.44□□□□□ -1.86
RNF43-203ENST00000577716 MT1MQ8N339 61 aa3.43□□□□□ -1.86
RNF43-203ENST00000577716 LOC100996750A0A140TA64 210 aa3.42□□□□□ -1.86
RNF43-203ENST00000577716 KRTAP4-3Q9BYR4 195 aa3.42□□□□□ -1.86
RNF43-203ENST00000577716 SPRR2DP22532 72 aa3.4□□□□□ -1.86
RNF43-203ENST00000577716 KMT2DO14686 5537 aa3.36□□□□□ -1.87
RNF43-203ENST00000577716 KRTAP2-3P0C7H8 128 aa3.32□□□□□ -1.88
RNF43-203ENST00000577716 KRTAP2-4Q9BYR9 128 aa3.32□□□□□ -1.88
RNF43-203ENST00000577716 KRTAP2-1Q9BYU5 128 aa3.32□□□□□ -1.88
RNF43-203ENST00000577716 KRTAP9-6A8MVA2 160 aa3.31□□□□□ -1.88
RNF43-203ENST00000577716 DSTQ03001 7570 aaKnown RBP3.31□□□□□ -1.88
RNF43-203ENST00000577716 FCGBPQ9Y6R7 5405 aaPredicted RBP3.29□□□□□ -1.88
RNF43-203ENST00000577716 KRTAP9-2Q9BYQ4 174 aa3.25□□□□□ -1.89
RNF43-203ENST00000577716 PRM1P04553 51 aa3.22□□□□□ -1.89
RNF43-203ENST00000577716 LCE2DQ5TA82 110 aaPredicted RBP3.22□□□□□ -1.89
RNF43-203ENST00000577716 SYNE2Q8WXH0 6885 aaKnown RBP3.2□□□□□ -1.9
RNF43-203ENST00000577716 MT3P25713 68 aa3.2□□□□□ -1.9
RNF43-203ENST00000577716 KRTAP4-9Q9BYQ8 210 aa3.2□□□□□ -1.9
RNF43-203ENST00000577716 KRTAP9-6A0A140TA67 174 aa3.19□□□□□ -1.9
RNF43-203ENST00000577716 MT1AP04731 61 aa3.16□□□□□ -1.9
RNF43-203ENST00000577716 MUC12Q9UKN1 5478 aa3.13□□□□□ -1.91
RNF43-203ENST00000577716 SSPOA2VEC9 5147 aa3.12□□□□□ -1.91
RNF43-203ENST00000577716 LCE5AQ5TCM9 118 aa3.07□□□□□ -1.92
RNF43-203ENST00000577716 MT4P47944 62 aa3.06□□□□□ -1.92
RNF43-203ENST00000577716 KRTAP6-1Q3LI64 71 aa3.05□□□□□ -1.92
RNF43-203ENST00000577716 MACF1Q9UPN3 7388 aaKnown RBP3.04□□□□□ -1.92
RNF43-203ENST00000577716 LCE1AQ5T7P2 110 aa2.98□□□□□ -1.93
RNF43-203ENST00000577716 LCE1DQ5T752 114 aa2.96□□□□□ -1.93
RNF43-203ENST00000577716 LCE1BQ5T7P3 118 aa2.95□□□□□ -1.94
RNF43-203ENST00000577716 KRTAP6-2Q3LI66 62 aa2.92□□□□□ -1.94
RNF43-203ENST00000577716 KRTAP9-4Q9BYQ2 154 aa2.89□□□□□ -1.95
RNF43-203ENST00000577716 KRTAP9-7A8MTY7 169 aa2.89□□□□□ -1.95
RNF43-203ENST00000577716 KRTAP6-3Q3LI67 103 aa2.85□□□□□ -1.95
RNF43-203ENST00000577716 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.84□□□□□ -1.96
RNF43-203ENST00000577716 MDN1Q9NU22 5596 aa2.74□□□□□ -1.97
RNF43-203ENST00000577716 KRTAP5-9P26371 169 aa2.74□□□□□ -1.97
RNF43-203ENST00000577716 MUC19Q7Z5P9 8384 aa2.72□□□□□ -1.97
RNF43-203ENST00000577716 KRTAP20-1Q3LI63 56 aa2.69□□□□□ -1.98
RNF43-203ENST00000577716 LCE4AQ5TA78 99 aa2.67□□□□□ -1.98
RNF43-203ENST00000577716 KRTAP2-2Q9BYT5 123 aa2.62□□□□□ -1.99
RNF43-203ENST00000577716 NEBP20929 6669 aa2.54□□□□□ -2
RNF43-203ENST00000577716 KRTAP4-6Q9BYQ5 205 aa2.53□□□□□ -2
RNF43-203ENST00000577716 KRTAP5-5Q701N2 237 aaPredicted RBP2.47□□□□□ -2.01
RNF43-203ENST00000577716 KRTAP20-2Q3LI61 65 aa2.43□□□□□ -2.02
RNF43-203ENST00000577716 KRTAP4-11Q9BYQ6 195 aa2.41□□□□□ -2.02
RNF43-203ENST00000577716 LCE1CQ5T751 118 aa2.35□□□□□ -2.03
RNF43-203ENST00000577716 LCE1EQ5T753 118 aa2.35□□□□□ -2.03
RNF43-203ENST00000577716 LCE1FQ5T754 118 aa2.35□□□□□ -2.03
RNF43-203ENST00000577716 GPR98Q8WXG9 6306 aa2.31□□□□□ -2.04
RNF43-203ENST00000577716 MUC5ACP98088 5654 aa2.24□□□□□ -2.05
RNF43-203ENST00000577716 KRTAP5-4Q6L8H1 288 aa2.24□□□□□ -2.05
RNF43-203ENST00000577716 KRTAP9-9Q9BYP9 154 aa2.18□□□□□ -2.06
RNF43-203ENST00000577716 KRTAP4-4Q9BYR3 166 aa2.16□□□□□ -2.06
RNF43-203ENST00000577716 HMCN1Q96RW7 5635 aa2.15□□□□□ -2.06
RNF43-203ENST00000577716 KRTAP4-12Q9BQ66 201 aa2.08□□□□□ -2.08
RNF43-203ENST00000577716 KRTAP4-2Q9BYR5 136 aa2.08□□□□□ -2.08
RNF43-203ENST00000577716 KRTAP5-2Q701N4 177 aa2.03□□□□□ -2.08
RNF43-203ENST00000577716 KRTAP5-3Q6L8H2 238 aa2□□□□□ -2.09
RNF43-203ENST00000577716 AHNAK2Q8IVF2 5795 aa1.94□□□□□ -2.1
RNF43-203ENST00000577716 KRTAP5-10Q6L8G5 202 aa1.94□□□□□ -2.1
RNF43-203ENST00000577716 KRTAP5-8O75690 187 aa1.84□□□□□ -2.12
RNF43-203ENST00000577716 KRTAP5-1Q6L8H4 278 aa1.79□□□□□ -2.12
RNF43-203ENST00000577716 KRTAP5-7Q6L8G8 165 aa1.76□□□□□ -2.13
RNF43-203ENST00000577716 AHNAKQ09666 5890 aaKnown RBP1.71□□□□□ -2.14
RNF43-203ENST00000577716 KRTAP21-2Q3LI59 83 aa1.7□□□□□ -2.14
RNF43-203ENST00000577716 MUC5BQ9HC84 5762 aaPredicted RBP1.69□□□□□ -2.14
RNF43-203ENST00000577716 KRTAP5-11Q6L8G4 156 aa1.66□□□□□ -2.14
RNF43-203ENST00000577716 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.6□□□□□ -2.15
RNF43-203ENST00000577716 KRTAP21-1Q3LI58 79 aa1.52□□□□□ -2.17
RNF43-203ENST00000577716 PHGR1C9JFL3 82 aa1.43□□□□□ -2.18
RNF43-203ENST00000577716 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 8.2 ms