RNA–Protein interactions for RNA: ENST00000575320.1

TFAP4-206, Transcript of transcription factor AP-4, human

TSL 2

Gene TFAP4, Length 6,491 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TFAP4-206	ENST00000575320	PCLO	Q9Y6V0	5065 aa		4.37	□□□□□ -1.71
TFAP4-206	ENST00000575320	MT1E	P04732	61 aa		4.35	□□□□□ -1.71
TFAP4-206	ENST00000575320	LCE1B	Q5T7P3	118 aa		4.35	□□□□□ -1.71
TFAP4-206	ENST00000575320	KRTAP2-3	P0C7H8	128 aa		4.34	□□□□□ -1.71
TFAP4-206	ENST00000575320	KRTAP2-4	Q9BYR9	128 aa		4.34	□□□□□ -1.71
TFAP4-206	ENST00000575320	LCE1D	Q5T752	114 aa		4.32	□□□□□ -1.72
TFAP4-206	ENST00000575320	MUC17	Q685J3	4493 aa		4.31	□□□□□ -1.72
TFAP4-206	ENST00000575320	KRTAP6-3	Q3LI67	103 aa		4.28	□□□□□ -1.72
TFAP4-206	ENST00000575320	ABCA13	Q86UQ4	5058 aa		4.28	□□□□□ -1.72
TFAP4-206	ENST00000575320	MT1M	Q8N339	61 aa		4.28	□□□□□ -1.72
TFAP4-206	ENST00000575320	LOC100996750	A0A140TA64	210 aa		4.27	□□□□□ -1.73
TFAP4-206	ENST00000575320	LCE5A	Q5TCM9	118 aa		4.21	□□□□□ -1.74
TFAP4-206	ENST00000575320	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	4.19	□□□□□ -1.74
TFAP4-206	ENST00000575320	LCE2A	Q5TA79	106 aa	Predicted RBP	4.18	□□□□□ -1.74
TFAP4-206	ENST00000575320	FSIP2	Q5CZC0	6907 aa		4.17	□□□□□ -1.74
TFAP4-206	ENST00000575320	KRTAP4-3	Q9BYR4	195 aa		4.16	□□□□□ -1.74
TFAP4-206	ENST00000575320	KRTAP2-2	Q9BYT5	123 aa		4.13	□□□□□ -1.75
TFAP4-206	ENST00000575320	KRTAP2-1	Q9BYU5	128 aa		4.13	□□□□□ -1.75
TFAP4-206	ENST00000575320	KRTAP19-2	Q3LHN2	52 aa		4.13	□□□□□ -1.75
TFAP4-206	ENST00000575320	FLG	P20930	4061 aa	Predicted RBP	4.12	□□□□□ -1.75
TFAP4-206	ENST00000575320	LCE4A	Q5TA78	99 aa		4.08	□□□□□ -1.76
TFAP4-206	ENST00000575320	HMCN2	Q8NDA2	5059 aa		4.07	□□□□□ -1.76
TFAP4-206	ENST00000575320	KRTAP4-9	Q9BYQ8	210 aa		4.05	□□□□□ -1.76
TFAP4-206	ENST00000575320	LCE1A	Q5T7P2	110 aa		4.04	□□□□□ -1.76
TFAP4-206	ENST00000575320	SYNE2	Q8WXH0	6885 aa	Known RBP	4.01	□□□□□ -1.77
TFAP4-206	ENST00000575320	MT1A	P04731	61 aa		3.98	□□□□□ -1.77
TFAP4-206	ENST00000575320	LCE1C	Q5T751	118 aa		3.93	□□□□□ -1.78
TFAP4-206	ENST00000575320	LCE1E	Q5T753	118 aa		3.93	□□□□□ -1.78
TFAP4-206	ENST00000575320	LCE1F	Q5T754	118 aa		3.93	□□□□□ -1.78
TFAP4-206	ENST00000575320	KRTAP19-7	Q3SYF9	63 aa		3.92	□□□□□ -1.78
TFAP4-206	ENST00000575320	UBR4	Q5T4S7	5183 aa		3.9	□□□□□ -1.79
TFAP4-206	ENST00000575320	FAT4	Q6V0I7	4981 aa		3.85	□□□□□ -1.79
TFAP4-206	ENST00000575320	KRTAP6-2	Q3LI66	62 aa		3.81	□□□□□ -1.8
TFAP4-206	ENST00000575320	RNF213	Q63HN8	5207 aa		3.79	□□□□□ -1.8
TFAP4-206	ENST00000575320	KRTAP9-9	Q9BYP9	154 aa		3.78	□□□□□ -1.8
TFAP4-206	ENST00000575320	MUC2	Q02817	5179 aa		3.78	□□□□□ -1.8
TFAP4-206	ENST00000575320	KRTAP6-1	Q3LI64	71 aa		3.73	□□□□□ -1.81
TFAP4-206	ENST00000575320	SYNE1	Q8NF91	8797 aa	Known RBP	3.73	□□□□□ -1.81
TFAP4-206	ENST00000575320	KRTAP9-4	Q9BYQ2	154 aa		3.72	□□□□□ -1.81
TFAP4-206	ENST00000575320	KRTAP9-6	A8MVA2	160 aa		3.69	□□□□□ -1.82
TFAP4-206	ENST00000575320	GPR98	Q8WXG9	6306 aa		3.55	□□□□□ -1.84
TFAP4-206	ENST00000575320	KMT2D	O14686	5537 aa		3.53	□□□□□ -1.84
TFAP4-206	ENST00000575320	OBSCN	Q5VST9	7968 aa		3.48	□□□□□ -1.85
TFAP4-206	ENST00000575320	NEB	P20929	6669 aa		3.41	□□□□□ -1.86
TFAP4-206	ENST00000575320	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	3.34	□□□□□ -1.87
TFAP4-206	ENST00000575320	KRTAP5-9	P26371	169 aa		3.28	□□□□□ -1.88
TFAP4-206	ENST00000575320	MACF1	Q9UPN3	7388 aa	Known RBP	3.27	□□□□□ -1.89
TFAP4-206	ENST00000575320	DST	Q03001	7570 aa	Known RBP	3.26	□□□□□ -1.89
TFAP4-206	ENST00000575320	USH2A	O75445	5202 aa		3.25	□□□□□ -1.89
TFAP4-206	ENST00000575320	KRTAP4-11	Q9BYQ6	195 aa		3.23	□□□□□ -1.89
TFAP4-206	ENST00000575320	KRTAP4-6	Q9BYQ5	205 aa		3.19	□□□□□ -1.9
TFAP4-206	ENST00000575320	KRTAP20-2	Q3LI61	65 aa		3.19	□□□□□ -1.9
TFAP4-206	ENST00000575320	SSPO	A2VEC9	5147 aa		3.18	□□□□□ -1.9
TFAP4-206	ENST00000575320	KRTAP5-4	Q6L8H1	288 aa		3.07	□□□□□ -1.92
TFAP4-206	ENST00000575320	KRTAP4-12	Q9BQ66	201 aa		3	□□□□□ -1.93
TFAP4-206	ENST00000575320	KRTAP4-2	Q9BYR5	136 aa		3	□□□□□ -1.93
TFAP4-206	ENST00000575320	KRTAP4-4	Q9BYR3	166 aa		2.99	□□□□□ -1.93
TFAP4-206	ENST00000575320	MUC12	Q9UKN1	5478 aa		2.99	□□□□□ -1.93
TFAP4-206	ENST00000575320	MUC19	Q7Z5P9	8384 aa		2.92	□□□□□ -1.94
TFAP4-206	ENST00000575320	KRTAP5-5	Q701N2	237 aa	Predicted RBP	2.8	□□□□□ -1.96
TFAP4-206	ENST00000575320	MDN1	Q9NU22	5596 aa		2.8	□□□□□ -1.96
TFAP4-206	ENST00000575320	KRTAP5-3	Q6L8H2	238 aa		2.73	□□□□□ -1.97
TFAP4-206	ENST00000575320	AHNAK2	Q8IVF2	5795 aa		2.67	□□□□□ -1.98
TFAP4-206	ENST00000575320	PHGR1	C9JFL3	82 aa		2.54	□□□□□ -2
TFAP4-206	ENST00000575320	AHNAK	Q09666	5890 aa	Known RBP	2.5	□□□□□ -2.01
TFAP4-206	ENST00000575320	HMCN1	Q96RW7	5635 aa		2.48	□□□□□ -2.01
TFAP4-206	ENST00000575320	MUC5AC	P98088	5654 aa		2.46	□□□□□ -2.02
TFAP4-206	ENST00000575320	KRTAP5-8	O75690	187 aa		2.46	□□□□□ -2.02
TFAP4-206	ENST00000575320	KRTAP5-2	Q701N4	177 aa		2.25	□□□□□ -2.05
TFAP4-206	ENST00000575320	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.23	□□□□□ -2.05
TFAP4-206	ENST00000575320	KRTAP5-10	Q6L8G5	202 aa		2.18	□□□□□ -2.06
TFAP4-206	ENST00000575320	KRTAP5-11	Q6L8G4	156 aa		1.96	□□□□□ -2.1
TFAP4-206	ENST00000575320	KRTAP5-7	Q6L8G8	165 aa		1.96	□□□□□ -2.1
TFAP4-206	ENST00000575320	KRTAP5-1	Q6L8H4	278 aa		1.93	□□□□□ -2.1
TFAP4-206	ENST00000575320	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	1.87	□□□□□ -2.11
TFAP4-206	ENST00000575320	KRTAP21-1	Q3LI58	79 aa		1.81	□□□□□ -2.12
TFAP4-206	ENST00000575320	KRTAP21-2	Q3LI59	83 aa		1.8	□□□□□ -2.12
TFAP4-206	ENST00000575320	MUC16	Q8WXI7	14507 aa		1.31	□□□□□ -2.2

Retrieved 78 of 20,778 RNA–protein pairs in 23.4 ms