RNA–Protein interactions for RNA: ENST00000574875.1

ABR-231, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 2

Gene ABR, Length 239 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-231	ENST00000574875	KRTAP2-2	Q9BYT5	123 aa		7.6	□□□□□ -1.19
ABR-231	ENST00000574875	KRTAP2-1	Q9BYU5	128 aa		7.6	□□□□□ -1.19
ABR-231	ENST00000574875	SPRR2D	P22532	72 aa		7.58	□□□□□ -1.2
ABR-231	ENST00000574875	TNP1	P09430	55 aa		7.55	□□□□□ -1.2
ABR-231	ENST00000574875	PP632	Q6XCG6	107 aa		7.44	□□□□□ -1.22
ABR-231	ENST00000574875	KRTAP23-1	A1A580	65 aa		7.43	□□□□□ -1.22
ABR-231	ENST00000574875	GPR98	Q8WXG9	6306 aa		7.38	□□□□□ -1.23
ABR-231	ENST00000574875	LCE3B	Q5TA77	95 aa		7.37	□□□□□ -1.23
ABR-231	ENST00000574875	KRTAP19-7	Q3SYF9	63 aa		7.29	□□□□□ -1.24
ABR-231	ENST00000574875	MT1E	P04732	61 aa		7.23	□□□□□ -1.25
ABR-231	ENST00000574875	LCE5A	Q5TCM9	118 aa		7.2	□□□□□ -1.26
ABR-231	ENST00000574875	KRTAP19-3	Q7Z4W3	81 aa		7.18	□□□□□ -1.26
ABR-231	ENST00000574875	KRTAP19-5	Q3LI72	72 aa		7.13	□□□□□ -1.27
ABR-231	ENST00000574875	LCE3A	Q5TA76	89 aa		7.13	□□□□□ -1.27
ABR-231	ENST00000574875	DST	Q03001	7570 aa	Known RBP	7.08	□□□□□ -1.28
ABR-231	ENST00000574875	MT1G	P13640	62 aa		7.04	□□□□□ -1.28
ABR-231	ENST00000574875	MT1L	Q93083	61 aa		6.91	□□□□□ -1.3
ABR-231	ENST00000574875	KRTAP4-9	Q9BYQ8	210 aa		6.9	□□□□□ -1.3
ABR-231	ENST00000574875	KRTAP12-3	P60328	96 aa		6.89	□□□□□ -1.31
ABR-231	ENST00000574875	MT1M	Q8N339	61 aa		6.89	□□□□□ -1.31
ABR-231	ENST00000574875	KRTAP15-1	Q3LI76	137 aa		6.79	□□□□□ -1.32
ABR-231	ENST00000574875	HMCN1	Q96RW7	5635 aa		6.76	□□□□□ -1.33
ABR-231	ENST00000574875	KRTAP4-3	Q9BYR4	195 aa		6.73	□□□□□ -1.33
ABR-231	ENST00000574875	LCE4A	Q5TA78	99 aa		6.7	□□□□□ -1.34
ABR-231	ENST00000574875	AHNAK2	Q8IVF2	5795 aa		6.7	□□□□□ -1.34
ABR-231	ENST00000574875	LCE1D	Q5T752	114 aa		6.69	□□□□□ -1.34
ABR-231	ENST00000574875	MT4	P47944	62 aa		6.63	□□□□□ -1.35
ABR-231	ENST00000574875	KRTAP19-4	Q3LI73	84 aa		6.61	□□□□□ -1.35
ABR-231	ENST00000574875	KRTAP4-7	Q9BYR0	210 aa		6.59	□□□□□ -1.35
ABR-231	ENST00000574875	SPRR5	A0A1B0GTR4	108 aa		6.57	□□□□□ -1.36
ABR-231	ENST00000574875	KRTAP5-4	Q6L8H1	288 aa		6.56	□□□□□ -1.36
ABR-231	ENST00000574875	KRTAP5-10	Q6L8G5	202 aa		6.48	□□□□□ -1.37
ABR-231	ENST00000574875	KRTAP4-6	Q9BYQ5	205 aa		6.45	□□□□□ -1.38
ABR-231	ENST00000574875	LCE3C	Q5T5A8	94 aa		6.44	□□□□□ -1.38
ABR-231	ENST00000574875	LUZP6	Q538Z0	58 aa		6.43	□□□□□ -1.38
ABR-231	ENST00000574875	KRTAP5-7	Q6L8G8	165 aa		6.3	□□□□□ -1.4
ABR-231	ENST00000574875	KRTAP5-5	Q701N2	237 aa	Predicted RBP	6.3	□□□□□ -1.4
ABR-231	ENST00000574875	LOC100996750	A0A140TA64	210 aa		6.24	□□□□□ -1.41
ABR-231	ENST00000574875	NDUFAF8	A1L188	74 aa		6.24	□□□□□ -1.41
ABR-231	ENST00000574875	KRTAP5-3	Q6L8H2	238 aa		6.2	□□□□□ -1.42
ABR-231	ENST00000574875	KRTAP20-2	Q3LI61	65 aa		6.19	□□□□□ -1.42
ABR-231	ENST00000574875	KRTAP12-4	P60329	112 aa		6.18	□□□□□ -1.42
ABR-231	ENST00000574875	SYNE1	Q8NF91	8797 aa	Known RBP	6.05	□□□□□ -1.44
ABR-231	ENST00000574875	KRTAP9-6	A8MVA2	160 aa		6.01	□□□□□ -1.45
ABR-231	ENST00000574875	MT1A	P04731	61 aa		5.88	□□□□□ -1.47
ABR-231	ENST00000574875	KRTAP6-1	Q3LI64	71 aa		5.85	□□□□□ -1.47
ABR-231	ENST00000574875	KRTAP5-2	Q701N4	177 aa		5.74	□□□□□ -1.49
ABR-231	ENST00000574875	KRTAP9-4	Q9BYQ2	154 aa		5.72	□□□□□ -1.49
ABR-231	ENST00000574875	AHNAK	Q09666	5890 aa	Known RBP	5.68	□□□□□ -1.5
ABR-231	ENST00000574875	KRTAP4-11	Q9BYQ6	195 aa		5.66	□□□□□ -1.5
ABR-231	ENST00000574875		A0A0A0MQY5	61 aa		5.61	□□□□□ -1.51
ABR-231	ENST00000574875	MUC5B	Q9HC84	5762 aa	Predicted RBP	5.61	□□□□□ -1.51
ABR-231	ENST00000574875		H3BS24	57 aa		5.6	□□□□□ -1.51
ABR-231	ENST00000574875	KRTAP6-2	Q3LI66	62 aa		5.6	□□□□□ -1.51
ABR-231	ENST00000574875	MUC5AC	P98088	5654 aa		5.6	□□□□□ -1.51
ABR-231	ENST00000574875	KRTAP5-8	O75690	187 aa		5.47	□□□□□ -1.53
ABR-231	ENST00000574875	MT3	P25713	68 aa		5.4	□□□□□ -1.54
ABR-231	ENST00000574875	OBSCN	Q5VST9	7968 aa		5.33	□□□□□ -1.56
ABR-231	ENST00000574875	INE1	O15225	51 aa		5.27	□□□□□ -1.57
ABR-231	ENST00000574875	KRTAP9-9	Q9BYP9	154 aa		5.25	□□□□□ -1.57
ABR-231	ENST00000574875	KRTAP5-1	Q6L8H4	278 aa		5.16	□□□□□ -1.58
ABR-231	ENST00000574875	LCE1E	Q5T753	118 aa		4.96	□□□□□ -1.62
ABR-231	ENST00000574875	LCE3D	Q9BYE3	92 aa		4.86	□□□□□ -1.63
ABR-231	ENST00000574875	LCE3E	Q5T5B0	92 aa		4.74	□□□□□ -1.65
ABR-231	ENST00000574875	LCE1B	Q5T7P3	118 aa		4.68	□□□□□ -1.66
ABR-231	ENST00000574875	KRTAP4-2	Q9BYR5	136 aa		4.67	□□□□□ -1.66
ABR-231	ENST00000574875	LCE1C	Q5T751	118 aa		4.59	□□□□□ -1.67
ABR-231	ENST00000574875	KRTAP4-12	Q9BQ66	201 aa		4.26	□□□□□ -1.73
ABR-231	ENST00000574875	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.17	□□□□□ -1.74
ABR-231	ENST00000574875	KRTAP5-11	Q6L8G4	156 aa		4.15	□□□□□ -1.75
ABR-231	ENST00000574875	PRM1	P04553	51 aa		4.13	□□□□□ -1.75
ABR-231	ENST00000574875	LCE1F	Q5T754	118 aa		4.06	□□□□□ -1.76
ABR-231	ENST00000574875	KRTAP21-2	Q3LI59	83 aa		3.86	□□□□□ -1.79
ABR-231	ENST00000574875	PHGR1	C9JFL3	82 aa		3.81	□□□□□ -1.8
ABR-231	ENST00000574875	KRTAP4-4	Q9BYR3	166 aa		3.55	□□□□□ -1.84
ABR-231	ENST00000574875	MUC19	Q7Z5P9	8384 aa		3.31	□□□□□ -1.88
ABR-231	ENST00000574875	KRTAP21-1	Q3LI58	79 aa		2.9	□□□□□ -1.95
ABR-231	ENST00000574875	MUC16	Q8WXI7	14507 aa		2.34	□□□□□ -2.03

Retrieved 78 of 20,778 RNA–protein pairs in 70.8 ms