RNA–Protein interactions for RNA: ENST00000574703.5

LITAF-214, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 486 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-214ENST00000574703 KRTAP2-1Q9BYU5 128 aa5.88□□□□□ -1.47
LITAF-214ENST00000574703 KRTAP25-1Q3LHN0 102 aa5.86□□□□□ -1.47
LITAF-214ENST00000574703 H3BS24 57 aa5.85□□□□□ -1.47
LITAF-214ENST00000574703 LCE3BQ5TA77 95 aa5.85□□□□□ -1.47
LITAF-214ENST00000574703 MT1GP13640 62 aa5.81□□□□□ -1.48
LITAF-214ENST00000574703 PP632Q6XCG6 107 aa5.77□□□□□ -1.49
LITAF-214ENST00000574703 MT1LQ93083 61 aa5.77□□□□□ -1.49
LITAF-214ENST00000574703 DSTQ03001 7570 aaKnown RBP5.76□□□□□ -1.49
LITAF-214ENST00000574703 CDC42SE1Q9NRR8 79 aa5.75□□□□□ -1.49
LITAF-214ENST00000574703 KRTAP12-3P60328 96 aa5.74□□□□□ -1.49
LITAF-214ENST00000574703 MT1MQ8N339 61 aa5.69□□□□□ -1.5
LITAF-214ENST00000574703 KRTAP23-1A1A580 65 aa5.67□□□□□ -1.5
LITAF-214ENST00000574703 ROMO1P60602 79 aa5.65□□□□□ -1.5
LITAF-214ENST00000574703 KRTAP4-3Q9BYR4 195 aa5.54□□□□□ -1.52
LITAF-214ENST00000574703 KRTAP4-7Q9BYR0 210 aa5.48□□□□□ -1.53
LITAF-214ENST00000574703 KRTAP19-4Q3LI73 84 aa5.47□□□□□ -1.53
LITAF-214ENST00000574703 KRTAP15-1Q3LI76 137 aa5.45□□□□□ -1.54
LITAF-214ENST00000574703 BRK1Q8WUW1 75 aa5.38□□□□□ -1.55
LITAF-214ENST00000574703 LCE4AQ5TA78 99 aa5.37□□□□□ -1.55
LITAF-214ENST00000574703 KRTAP4-9Q9BYQ8 210 aa5.36□□□□□ -1.55
LITAF-214ENST00000574703 LCE3CQ5T5A8 94 aa5.31□□□□□ -1.56
LITAF-214ENST00000574703 KRTAP5-4Q6L8H1 288 aa5.3□□□□□ -1.56
LITAF-214ENST00000574703 LCE1DQ5T752 114 aa5.28□□□□□ -1.56
LITAF-214ENST00000574703 MT4P47944 62 aa5.25□□□□□ -1.57
LITAF-214ENST00000574703 HMCN1Q96RW7 5635 aa5.22□□□□□ -1.57
LITAF-214ENST00000574703 KRTAP5-5Q701N2 237 aaPredicted RBP5.2□□□□□ -1.58
LITAF-214ENST00000574703 LOC100996750A0A140TA64 210 aa5.18□□□□□ -1.58
LITAF-214ENST00000574703 KRTAP4-6Q9BYQ5 205 aa5.13□□□□□ -1.59
LITAF-214ENST00000574703 GPR98Q8WXG9 6306 aa5.09□□□□□ -1.6
LITAF-214ENST00000574703 PMAIP1Q13794 54 aa5.08□□□□□ -1.6
LITAF-214ENST00000574703 A0A0A0MQY5 61 aa5.05□□□□□ -1.6
LITAF-214ENST00000574703 KRTAP12-4P60329 112 aa5.03□□□□□ -1.6
LITAF-214ENST00000574703 SPRR5A0A1B0GTR4 108 aa5□□□□□ -1.61
LITAF-214ENST00000574703 KRTAP9-6A8MVA2 160 aa4.98□□□□□ -1.61
LITAF-214ENST00000574703 KRTAP20-2Q3LI61 65 aa4.98□□□□□ -1.61
LITAF-214ENST00000574703 SYNE1Q8NF91 8797 aaKnown RBP4.96□□□□□ -1.62
LITAF-214ENST00000574703 AHNAK2Q8IVF2 5795 aa4.95□□□□□ -1.62
LITAF-214ENST00000574703 MT1AP04731 61 aa4.92□□□□□ -1.62
LITAF-214ENST00000574703 PRO0628Q9UI54 55 aa4.88□□□□□ -1.63
LITAF-214ENST00000574703 KRTAP6-1Q3LI64 71 aa4.86□□□□□ -1.63
LITAF-214ENST00000574703 KRTAP5-3Q6L8H2 238 aa4.82□□□□□ -1.64
LITAF-214ENST00000574703 PRAC1Q96KF2 57 aa4.81□□□□□ -1.64
LITAF-214ENST00000574703 KRTAP5-10Q6L8G5 202 aa4.78□□□□□ -1.64
LITAF-214ENST00000574703 KRTAP9-4Q9BYQ2 154 aa4.74□□□□□ -1.65
LITAF-214ENST00000574703 KRTAP5-2Q701N4 177 aa4.67□□□□□ -1.66
LITAF-214ENST00000574703 KTN1-AS1Q86SY8 53 aa4.62□□□□□ -1.67
LITAF-214ENST00000574703 KRTAP6-2Q3LI66 62 aa4.61□□□□□ -1.67
LITAF-214ENST00000574703 KRTAP5-7Q6L8G8 165 aa4.57□□□□□ -1.68
LITAF-214ENST00000574703 MT3P25713 68 aa4.51□□□□□ -1.69
LITAF-214ENST00000574703 KRTAP4-11Q9BYQ6 195 aa4.49□□□□□ -1.69
LITAF-214ENST00000574703 OBSCNQ5VST9 7968 aa4.41□□□□□ -1.7
LITAF-214ENST00000574703 KRTAP5-8O75690 187 aa4.33□□□□□ -1.72
LITAF-214ENST00000574703 KRTAP5-1Q6L8H4 278 aa4.15□□□□□ -1.75
LITAF-214ENST00000574703 MUC5ACP98088 5654 aa4.11□□□□□ -1.75
LITAF-214ENST00000574703 LCE1EQ5T753 118 aa4.09□□□□□ -1.75
LITAF-214ENST00000574703 LUZP6Q538Z0 58 aa4.08□□□□□ -1.76
LITAF-214ENST00000574703 KRTAP9-9Q9BYP9 154 aa4.08□□□□□ -1.76
LITAF-214ENST00000574703 AHNAKQ09666 5890 aaKnown RBP4.04□□□□□ -1.76
LITAF-214ENST00000574703 MUC5BQ9HC84 5762 aaPredicted RBP4.04□□□□□ -1.76
LITAF-214ENST00000574703 LCE3DQ9BYE3 92 aa3.88□□□□□ -1.79
LITAF-214ENST00000574703 LCE1BQ5T7P3 118 aa3.81□□□□□ -1.8
LITAF-214ENST00000574703 KRTAP4-2Q9BYR5 136 aa3.81□□□□□ -1.8
LITAF-214ENST00000574703 LCE1CQ5T751 118 aa3.79□□□□□ -1.8
LITAF-214ENST00000574703 NDUFAF8A1L188 74 aa3.78□□□□□ -1.8
LITAF-214ENST00000574703 LCE3EQ5T5B0 92 aa3.69□□□□□ -1.82
LITAF-214ENST00000574703 KRTAP4-12Q9BQ66 201 aa3.64□□□□□ -1.83
LITAF-214ENST00000574703 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.47□□□□□ -1.85
LITAF-214ENST00000574703 KRTAP5-11Q6L8G4 156 aa3.4□□□□□ -1.87
LITAF-214ENST00000574703 LCE1FQ5T754 118 aa3.27□□□□□ -1.89
LITAF-214ENST00000574703 KRTAP21-2Q3LI59 83 aa3.2□□□□□ -1.9
LITAF-214ENST00000574703 PHGR1C9JFL3 82 aa2.94□□□□□ -1.94
LITAF-214ENST00000574703 PRM1P04553 51 aa2.89□□□□□ -1.95
LITAF-214ENST00000574703 KRTAP4-4Q9BYR3 166 aa2.88□□□□□ -1.95
LITAF-214ENST00000574703 INE1O15225 51 aa2.83□□□□□ -1.96
LITAF-214ENST00000574703 MUC19Q7Z5P9 8384 aa2.67□□□□□ -1.98
LITAF-214ENST00000574703 KRTAP21-1Q3LI58 79 aa2.12□□□□□ -2.07
LITAF-214ENST00000574703 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 6.8 ms