RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 LUZP6Q538Z0 58 aa10.33□□□□□ -0.76
CTDNEP1-208ENST00000573600 KRTAP6-3Q3LI67 103 aa10.27□□□□□ -0.77
CTDNEP1-208ENST00000573600 SPRR2FQ96RM1 72 aa10.19□□□□□ -0.78
CTDNEP1-208ENST00000573600 NDUFAF8A1L188 74 aa10.17□□□□□ -0.78
CTDNEP1-208ENST00000573600 KRTAP19-3Q7Z4W3 81 aa10.09□□□□□ -0.79
CTDNEP1-208ENST00000573600 MT1GP13640 62 aa10.03□□□□□ -0.8
CTDNEP1-208ENST00000573600 KRTAP5-9P26371 169 aa10.02□□□□□ -0.8
CTDNEP1-208ENST00000573600 KRTAP4-7Q9BYR0 210 aa10□□□□□ -0.81
CTDNEP1-208ENST00000573600 MUC12Q9UKN1 5478 aa9.93□□□□□ -0.82
CTDNEP1-208ENST00000573600 MT1MQ8N339 61 aa9.9□□□□□ -0.83
CTDNEP1-208ENST00000573600 LCE5AQ5TCM9 118 aa9.87□□□□□ -0.83
CTDNEP1-208ENST00000573600 NEBP20929 6669 aa9.73□□□□□ -0.85
CTDNEP1-208ENST00000573600 KRTAP9-6A8MVA2 160 aa9.73□□□□□ -0.85
CTDNEP1-208ENST00000573600 LCE1AQ5T7P2 110 aa9.7□□□□□ -0.86
CTDNEP1-208ENST00000573600 KRTAP4-3Q9BYR4 195 aa9.67□□□□□ -0.86
CTDNEP1-208ENST00000573600 SPRR2EP22531 72 aa9.62□□□□□ -0.87
CTDNEP1-208ENST00000573600 SPRR2BP35325 72 aa9.62□□□□□ -0.87
CTDNEP1-208ENST00000573600 SPRR2AP35326 72 aa9.62□□□□□ -0.87
CTDNEP1-208ENST00000573600 MDN1Q9NU22 5596 aa9.61□□□□□ -0.87
CTDNEP1-208ENST00000573600 LOC100996750A0A140TA64 210 aa9.39□□□□□ -0.91
CTDNEP1-208ENST00000573600 KRTAP20-1Q3LI63 56 aa9.36□□□□□ -0.91
CTDNEP1-208ENST00000573600 SPRR2DP22532 72 aa9.27□□□□□ -0.93
CTDNEP1-208ENST00000573600 KRTAP2-3P0C7H8 128 aa9.19□□□□□ -0.94
CTDNEP1-208ENST00000573600 KRTAP2-4Q9BYR9 128 aa9.19□□□□□ -0.94
CTDNEP1-208ENST00000573600 DSTQ03001 7570 aaKnown RBP9.12□□□□□ -0.95
CTDNEP1-208ENST00000573600 KRTAP2-1Q9BYU5 128 aa9.11□□□□□ -0.95
CTDNEP1-208ENST00000573600 A0A0A0MQY5 61 aa9.03□□□□□ -0.96
CTDNEP1-208ENST00000573600 KRTAP2-2Q9BYT5 123 aa8.91□□□□□ -0.98
CTDNEP1-208ENST00000573600 KRTAP5-5Q701N2 237 aaPredicted RBP8.9□□□□□ -0.98
CTDNEP1-208ENST00000573600 LCE3BQ5TA77 95 aa8.88□□□□□ -0.99
CTDNEP1-208ENST00000573600 MT1AP04731 61 aa8.8□□□□□ -1
CTDNEP1-208ENST00000573600 KRTAP6-1Q3LI64 71 aa8.69□□□□□ -1.02
CTDNEP1-208ENST00000573600 INE1O15225 51 aa8.44□□□□□ -1.06
CTDNEP1-208ENST00000573600 KRTAP5-4Q6L8H1 288 aa8.42□□□□□ -1.06
CTDNEP1-208ENST00000573600 KRTAP4-6Q9BYQ5 205 aa8.4□□□□□ -1.07
CTDNEP1-208ENST00000573600 KRTAP9-4Q9BYQ2 154 aa8.34□□□□□ -1.07
CTDNEP1-208ENST00000573600 SYNE1Q8NF91 8797 aaKnown RBP8.34□□□□□ -1.07
CTDNEP1-208ENST00000573600 KRTAP12-4P60329 112 aa8.25□□□□□ -1.09
CTDNEP1-208ENST00000573600 LCE4AQ5TA78 99 aa8.25□□□□□ -1.09
CTDNEP1-208ENST00000573600 KRTAP4-9Q9BYQ8 210 aa8.25□□□□□ -1.09
CTDNEP1-208ENST00000573600 KRTAP4-12Q9BQ66 201 aa8.09□□□□□ -1.11
CTDNEP1-208ENST00000573600 LCE1DQ5T752 114 aa8.08□□□□□ -1.12
CTDNEP1-208ENST00000573600 MT4P47944 62 aa8.01□□□□□ -1.13
CTDNEP1-208ENST00000573600 MT3P25713 68 aa7.98□□□□□ -1.13
CTDNEP1-208ENST00000573600 KRTAP6-2Q3LI66 62 aa7.98□□□□□ -1.13
CTDNEP1-208ENST00000573600 HMCN1Q96RW7 5635 aa7.87□□□□□ -1.15
CTDNEP1-208ENST00000573600 KRTAP20-2Q3LI61 65 aa7.86□□□□□ -1.15
CTDNEP1-208ENST00000573600 LCE3DQ9BYE3 92 aa7.8□□□□□ -1.16
CTDNEP1-208ENST00000573600 KRTAP9-9Q9BYP9 154 aa7.71□□□□□ -1.18
CTDNEP1-208ENST00000573600 KRTAP5-2Q701N4 177 aa7.66□□□□□ -1.18
CTDNEP1-208ENST00000573600 LCE3EQ5T5B0 92 aa7.61□□□□□ -1.19
CTDNEP1-208ENST00000573600 GPR98Q8WXG9 6306 aa7.6□□□□□ -1.19
CTDNEP1-208ENST00000573600 KRTAP5-3Q6L8H2 238 aa7.56□□□□□ -1.2
CTDNEP1-208ENST00000573600 AHNAK2Q8IVF2 5795 aa7.48□□□□□ -1.21
CTDNEP1-208ENST00000573600 KRTAP5-10Q6L8G5 202 aa7.38□□□□□ -1.23
CTDNEP1-208ENST00000573600 OBSCNQ5VST9 7968 aa7.18□□□□□ -1.26
CTDNEP1-208ENST00000573600 KRTAP5-7Q6L8G8 165 aa7.03□□□□□ -1.28
CTDNEP1-208ENST00000573600 LCE1EQ5T753 118 aa6.88□□□□□ -1.31
CTDNEP1-208ENST00000573600 KRTAP4-11Q9BYQ6 195 aa6.83□□□□□ -1.32
CTDNEP1-208ENST00000573600 PRM1P04553 51 aa6.7□□□□□ -1.34
CTDNEP1-208ENST00000573600 KRTAP5-8O75690 187 aa6.64□□□□□ -1.35
CTDNEP1-208ENST00000573600 KRTAP4-2Q9BYR5 136 aa6.61□□□□□ -1.35
CTDNEP1-208ENST00000573600 KRTAP5-1Q6L8H4 278 aa6.59□□□□□ -1.36
CTDNEP1-208ENST00000573600 LCE1BQ5T7P3 118 aa6.44□□□□□ -1.38
CTDNEP1-208ENST00000573600 LCE1CQ5T751 118 aa6.41□□□□□ -1.38
CTDNEP1-208ENST00000573600 MUC5ACP98088 5654 aa6.34□□□□□ -1.39
CTDNEP1-208ENST00000573600 MUC5BQ9HC84 5762 aaPredicted RBP6.11□□□□□ -1.43
CTDNEP1-208ENST00000573600 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.02□□□□□ -1.45
CTDNEP1-208ENST00000573600 AHNAKQ09666 5890 aaKnown RBP5.99□□□□□ -1.45
CTDNEP1-208ENST00000573600 LCE1FQ5T754 118 aa5.74□□□□□ -1.49
CTDNEP1-208ENST00000573600 KRTAP21-2Q3LI59 83 aa5.69□□□□□ -1.5
CTDNEP1-208ENST00000573600 KRTAP5-11Q6L8G4 156 aa5.63□□□□□ -1.51
CTDNEP1-208ENST00000573600 KRTAP4-4Q9BYR3 166 aa5.02□□□□□ -1.61
CTDNEP1-208ENST00000573600 PHGR1C9JFL3 82 aa4.83□□□□□ -1.64
CTDNEP1-208ENST00000573600 MUC19Q7Z5P9 8384 aa4.19□□□□□ -1.74
CTDNEP1-208ENST00000573600 KRTAP21-1Q3LI58 79 aa4.13□□□□□ -1.75
CTDNEP1-208ENST00000573600 MUC16Q8WXI7 14507 aa3.17□□□□□ -1.9
Retrieved 77 of 20,778 RNA–protein pairs in 111.4 ms