RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 KRTAP19-4Q3LI73 84 aa5.38□□□□□ -1.55
NPLOC4-209ENST00000572760 LCE1AQ5T7P2 110 aa5.38□□□□□ -1.55
NPLOC4-209ENST00000572760 MT1EP04732 61 aa5.35□□□□□ -1.55
NPLOC4-209ENST00000572760 KRTAP23-1A1A580 65 aa5.28□□□□□ -1.56
NPLOC4-209ENST00000572760 SPRR2DP22532 72 aa5.27□□□□□ -1.57
NPLOC4-209ENST00000572760 MDN1Q9NU22 5596 aa5.26□□□□□ -1.57
NPLOC4-209ENST00000572760 KRTAP12-3P60328 96 aa5.26□□□□□ -1.57
NPLOC4-209ENST00000572760 KRTAP19-3Q7Z4W3 81 aa5.25□□□□□ -1.57
NPLOC4-209ENST00000572760 KRTAP20-1Q3LI63 56 aa5.21□□□□□ -1.58
NPLOC4-209ENST00000572760 PP632Q6XCG6 107 aa5.2□□□□□ -1.58
NPLOC4-209ENST00000572760 MT1GP13640 62 aa5.18□□□□□ -1.58
NPLOC4-209ENST00000572760 LCE5AQ5TCM9 118 aa5.18□□□□□ -1.58
NPLOC4-209ENST00000572760 MT1LQ93083 61 aa5.18□□□□□ -1.58
NPLOC4-209ENST00000572760 KRTAP2-3P0C7H8 128 aa5.17□□□□□ -1.58
NPLOC4-209ENST00000572760 KRTAP2-4Q9BYR9 128 aa5.17□□□□□ -1.58
NPLOC4-209ENST00000572760 KRTAP4-12Q9BQ66 201 aa5.13□□□□□ -1.59
NPLOC4-209ENST00000572760 LCE3BQ5TA77 95 aa5.08□□□□□ -1.6
NPLOC4-209ENST00000572760 MT1MQ8N339 61 aa5.07□□□□□ -1.6
NPLOC4-209ENST00000572760 PRAC1Q96KF2 57 aa5.05□□□□□ -1.6
NPLOC4-209ENST00000572760 KRTAP15-1Q3LI76 137 aa5.04□□□□□ -1.6
NPLOC4-209ENST00000572760 KRTAP2-2Q9BYT5 123 aa5.03□□□□□ -1.6
NPLOC4-209ENST00000572760 KRTAP2-1Q9BYU5 128 aa5.03□□□□□ -1.6
NPLOC4-209ENST00000572760 KRTAP4-3Q9BYR4 195 aa4.95□□□□□ -1.62
NPLOC4-209ENST00000572760 KRTAP4-7Q9BYR0 210 aa4.94□□□□□ -1.62
NPLOC4-209ENST00000572760 LCE4AQ5TA78 99 aa4.93□□□□□ -1.62
NPLOC4-209ENST00000572760 DSTQ03001 7570 aaKnown RBP4.92□□□□□ -1.62
NPLOC4-209ENST00000572760 LCE3CQ5T5A8 94 aa4.87□□□□□ -1.63
NPLOC4-209ENST00000572760 KRTAP9-9Q9BYP9 154 aa4.85□□□□□ -1.63
NPLOC4-209ENST00000572760 KRTAP9-4Q9BYQ2 154 aa4.85□□□□□ -1.63
NPLOC4-209ENST00000572760 LCE1DQ5T752 114 aa4.72□□□□□ -1.65
NPLOC4-209ENST00000572760 GPR98Q8WXG9 6306 aa4.67□□□□□ -1.66
NPLOC4-209ENST00000572760 KRTAP4-9Q9BYQ8 210 aa4.63□□□□□ -1.67
NPLOC4-209ENST00000572760 KRTAP5-4Q6L8H1 288 aa4.59□□□□□ -1.67
NPLOC4-209ENST00000572760 MT4P47944 62 aa4.58□□□□□ -1.68
NPLOC4-209ENST00000572760 KRTAP5-5Q701N2 237 aaPredicted RBP4.57□□□□□ -1.68
NPLOC4-209ENST00000572760 KRTAP9-6A8MVA2 160 aa4.54□□□□□ -1.68
NPLOC4-209ENST00000572760 A0A0A0MQY5 61 aa4.47□□□□□ -1.69
NPLOC4-209ENST00000572760 KRTAP12-4P60329 112 aa4.45□□□□□ -1.7
NPLOC4-209ENST00000572760 MT1AP04731 61 aa4.42□□□□□ -1.7
NPLOC4-209ENST00000572760 KRTAP4-11Q9BYQ6 195 aa4.4□□□□□ -1.71
NPLOC4-209ENST00000572760 SYNE1Q8NF91 8797 aaKnown RBP4.38□□□□□ -1.71
NPLOC4-209ENST00000572760 KRTAP6-1Q3LI64 71 aa4.36□□□□□ -1.71
NPLOC4-209ENST00000572760 SPRR5A0A1B0GTR4 108 aa4.35□□□□□ -1.71
NPLOC4-209ENST00000572760 KRTAP20-2Q3LI61 65 aa4.33□□□□□ -1.72
NPLOC4-209ENST00000572760 HMCN1Q96RW7 5635 aa4.33□□□□□ -1.72
NPLOC4-209ENST00000572760 KRTAP4-2Q9BYR5 136 aa4.3□□□□□ -1.72
NPLOC4-209ENST00000572760 NDUFAF8A1L188 74 aa4.29□□□□□ -1.72
NPLOC4-209ENST00000572760 LUZP6Q538Z0 58 aa4.2□□□□□ -1.74
NPLOC4-209ENST00000572760 KRTAP5-3Q6L8H2 238 aa4.17□□□□□ -1.74
NPLOC4-209ENST00000572760 AHNAK2Q8IVF2 5795 aa4.16□□□□□ -1.74
NPLOC4-209ENST00000572760 KRTAP6-2Q3LI66 62 aa4.11□□□□□ -1.75
NPLOC4-209ENST00000572760 KRTAP5-2Q701N4 177 aa4.08□□□□□ -1.76
NPLOC4-209ENST00000572760 MT3P25713 68 aa4.05□□□□□ -1.76
NPLOC4-209ENST00000572760 KRTAP5-10Q6L8G5 202 aa4.01□□□□□ -1.77
NPLOC4-209ENST00000572760 KRTAP5-7Q6L8G8 165 aa3.91□□□□□ -1.78
NPLOC4-209ENST00000572760 OBSCNQ5VST9 7968 aa3.77□□□□□ -1.81
NPLOC4-209ENST00000572760 KRTAP5-8O75690 187 aa3.72□□□□□ -1.81
NPLOC4-209ENST00000572760 INE1O15225 51 aa3.68□□□□□ -1.82
NPLOC4-209ENST00000572760 LCE3DQ9BYE3 92 aa3.6□□□□□ -1.83
NPLOC4-209ENST00000572760 LCE1EQ5T753 118 aa3.59□□□□□ -1.83
NPLOC4-209ENST00000572760 KRTAP5-1Q6L8H4 278 aa3.59□□□□□ -1.83
NPLOC4-209ENST00000572760 AHNAKQ09666 5890 aaKnown RBP3.55□□□□□ -1.84
NPLOC4-209ENST00000572760 MUC5ACP98088 5654 aa3.47□□□□□ -1.85
NPLOC4-209ENST00000572760 LCE3EQ5T5B0 92 aa3.46□□□□□ -1.86
NPLOC4-209ENST00000572760 MUC5BQ9HC84 5762 aaPredicted RBP3.44□□□□□ -1.86
NPLOC4-209ENST00000572760 LCE1BQ5T7P3 118 aa3.42□□□□□ -1.86
NPLOC4-209ENST00000572760 LCE1CQ5T751 118 aa3.33□□□□□ -1.88
NPLOC4-209ENST00000572760 LCE1FQ5T754 118 aa3.24□□□□□ -1.89
NPLOC4-209ENST00000572760 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.06□□□□□ -1.92
NPLOC4-209ENST00000572760 KRTAP5-11Q6L8G4 156 aa2.98□□□□□ -1.93
NPLOC4-209ENST00000572760 KRTAP21-2Q3LI59 83 aa2.85□□□□□ -1.95
NPLOC4-209ENST00000572760 PRM1P04553 51 aa2.8□□□□□ -1.96
NPLOC4-209ENST00000572760 KRTAP4-4Q9BYR3 166 aa2.6□□□□□ -1.99
NPLOC4-209ENST00000572760 PHGR1C9JFL3 82 aa2.56□□□□□ -2
NPLOC4-209ENST00000572760 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
NPLOC4-209ENST00000572760 KRTAP21-1Q3LI58 79 aa1.79□□□□□ -2.12
NPLOC4-209ENST00000572760 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 8.1 ms