RNA–Protein interactions for RNA: ENST00000572360.5

TOM1L1-212, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1L1, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-212ENST00000572360 FAT3Q8TDW7 4589 aa1.89□□□□□ -2.11
TOM1L1-212ENST00000572360 MUC19Q7Z5P9 8384 aa1.88□□□□□ -2.11
TOM1L1-212ENST00000572360 TNXBP22105 4242 aa1.87□□□□□ -2.11
TOM1L1-212ENST00000572360 LRP1Q07954 4544 aaKnown RBP1.87□□□□□ -2.11
TOM1L1-212ENST00000572360 R4GN34 69 aa1.87□□□□□ -2.11
TOM1L1-212ENST00000572360 KRTAP10-10P60014 251 aa1.86□□□□□ -2.11
TOM1L1-212ENST00000572360 PLAC4Q8WY50 150 aa1.86□□□□□ -2.11
TOM1L1-212ENST00000572360 LRP2P98164 4655 aa1.85□□□□□ -2.11
TOM1L1-212ENST00000572360 FSIP2Q5CZC0 6907 aa1.84□□□□□ -2.12
TOM1L1-212ENST00000572360 LUZP6Q538Z0 58 aa1.81□□□□□ -2.12
TOM1L1-212ENST00000572360 SPRR5A0A1B0GTR4 108 aa1.79□□□□□ -2.12
TOM1L1-212ENST00000572360 KRTAP19-2Q3LHN2 52 aa1.79□□□□□ -2.12
TOM1L1-212ENST00000572360 CAMK2N1Q7Z7J9 78 aa1.79□□□□□ -2.12
TOM1L1-212ENST00000572360 TNP1P09430 55 aa1.77□□□□□ -2.13
TOM1L1-212ENST00000572360 KRTAP4-1Q9BYQ7 146 aa1.75□□□□□ -2.13
TOM1L1-212ENST00000572360 GPR98Q8WXG9 6306 aa1.73□□□□□ -2.13
TOM1L1-212ENST00000572360 CRCT1Q9UGL9 99 aa1.73□□□□□ -2.13
TOM1L1-212ENST00000572360 KRTAP21-2Q3LI59 83 aa1.72□□□□□ -2.13
TOM1L1-212ENST00000572360 SPRR2GQ9BYE4 73 aa1.71□□□□□ -2.14
TOM1L1-212ENST00000572360 MUC17Q685J3 4493 aa1.7□□□□□ -2.14
TOM1L1-212ENST00000572360 LPAP08519 4548 aa1.69□□□□□ -2.14
TOM1L1-212ENST00000572360 INE1O15225 51 aa1.66□□□□□ -2.14
TOM1L1-212ENST00000572360 KRTAP8-1Q8IUC2 63 aa1.65□□□□□ -2.15
TOM1L1-212ENST00000572360 PRO2289Q9P1D8 64 aa1.65□□□□□ -2.15
TOM1L1-212ENST00000572360 KRTAP19-8Q3LI54 63 aa1.63□□□□□ -2.15
TOM1L1-212ENST00000572360 SYNE2Q8WXH0 6885 aaKnown RBP1.62□□□□□ -2.15
TOM1L1-212ENST00000572360 USH2AO75445 5202 aa1.62□□□□□ -2.15
TOM1L1-212ENST00000572360 SSPOA2VEC9 5147 aa1.62□□□□□ -2.15
TOM1L1-212ENST00000572360 FCGBPQ9Y6R7 5405 aaPredicted RBP1.59□□□□□ -2.16
TOM1L1-212ENST00000572360 MT2AP02795 61 aa1.58□□□□□ -2.16
TOM1L1-212ENST00000572360 MT1HP80294 61 aa1.58□□□□□ -2.16
TOM1L1-212ENST00000572360 MACF1Q9UPN3 7388 aaKnown RBP1.57□□□□□ -2.16
TOM1L1-212ENST00000572360 FLGP20930 4061 aaPredicted RBP1.57□□□□□ -2.16
TOM1L1-212ENST00000572360 NEBP20929 6669 aa1.57□□□□□ -2.16
TOM1L1-212ENST00000572360 KRTAP12-3P60328 96 aa1.57□□□□□ -2.16
TOM1L1-212ENST00000572360 MT1FP04733 61 aa1.56□□□□□ -2.16
TOM1L1-212ENST00000572360 M0R2T5 61 aa1.55□□□□□ -2.16
TOM1L1-212ENST00000572360 MT1BP07438 61 aa1.55□□□□□ -2.16
TOM1L1-212ENST00000572360 MT1XP80297 61 aa1.55□□□□□ -2.16
TOM1L1-212ENST00000572360 MUC12Q9UKN1 5478 aa1.5□□□□□ -2.17
TOM1L1-212ENST00000572360 KMT2DO14686 5537 aa1.48□□□□□ -2.17
TOM1L1-212ENST00000572360 MDN1Q9NU22 5596 aa1.47□□□□□ -2.17
TOM1L1-212ENST00000572360 KRTAP2-3P0C7H8 128 aa1.45□□□□□ -2.18
TOM1L1-212ENST00000572360 KRTAP19-5Q3LI72 72 aa1.45□□□□□ -2.18
TOM1L1-212ENST00000572360 KRTAP2-4Q9BYR9 128 aa1.45□□□□□ -2.18
TOM1L1-212ENST00000572360 KRTAP2-1Q9BYU5 128 aa1.45□□□□□ -2.18
TOM1L1-212ENST00000572360 AHNAK2Q8IVF2 5795 aa1.45□□□□□ -2.18
TOM1L1-212ENST00000572360 KRTAP20-1Q3LI63 56 aa1.44□□□□□ -2.18
TOM1L1-212ENST00000572360 KRTAP12-4P60329 112 aa1.41□□□□□ -2.18
TOM1L1-212ENST00000572360 KRTAP6-3Q3LI67 103 aa1.4□□□□□ -2.19
TOM1L1-212ENST00000572360 KRTAP19-7Q3SYF9 63 aa1.38□□□□□ -2.19
TOM1L1-212ENST00000572360 AHNAKQ09666 5890 aaKnown RBP1.36□□□□□ -2.19
TOM1L1-212ENST00000572360 MT1EP04732 61 aa1.36□□□□□ -2.19
TOM1L1-212ENST00000572360 MT1LQ93083 61 aa1.36□□□□□ -2.19
TOM1L1-212ENST00000572360 MUC5BQ9HC84 5762 aaPredicted RBP1.3□□□□□ -2.2
TOM1L1-212ENST00000572360 DSTQ03001 7570 aaKnown RBP1.29□□□□□ -2.2
TOM1L1-212ENST00000572360 KRTAP19-6Q3LI70 58 aa1.29□□□□□ -2.2
TOM1L1-212ENST00000572360 HMCN1Q96RW7 5635 aa1.29□□□□□ -2.2
TOM1L1-212ENST00000572360 MT1GP13640 62 aa1.28□□□□□ -2.2
TOM1L1-212ENST00000572360 MT1AP04731 61 aa1.25□□□□□ -2.21
TOM1L1-212ENST00000572360 KRTAP19-3Q7Z4W3 81 aa1.25□□□□□ -2.21
TOM1L1-212ENST00000572360 MT1MQ8N339 61 aa1.25□□□□□ -2.21
TOM1L1-212ENST00000572360 SPRR2EP22531 72 aa1.18□□□□□ -2.22
TOM1L1-212ENST00000572360 SPRR2BP35325 72 aa1.18□□□□□ -2.22
TOM1L1-212ENST00000572360 SPRR2AP35326 72 aa1.18□□□□□ -2.22
TOM1L1-212ENST00000572360 KRTAP5-10Q6L8G5 202 aa1.15□□□□□ -2.23
TOM1L1-212ENST00000572360 MUC5ACP98088 5654 aa1.14□□□□□ -2.23
TOM1L1-212ENST00000572360 SPRR2DP22532 72 aa1.14□□□□□ -2.23
TOM1L1-212ENST00000572360 SPRR2FQ96RM1 72 aa1.13□□□□□ -2.23
TOM1L1-212ENST00000572360 KRTAP6-1Q3LI64 71 aa1.12□□□□□ -2.23
TOM1L1-212ENST00000572360 PRM1P04553 51 aa1.09□□□□□ -2.23
TOM1L1-212ENST00000572360 MT4P47944 62 aa1.06□□□□□ -2.24
TOM1L1-212ENST00000572360 KRTAP6-2Q3LI66 62 aa1.05□□□□□ -2.24
TOM1L1-212ENST00000572360 SYNE1Q8NF91 8797 aaKnown RBP1.01□□□□□ -2.25
TOM1L1-212ENST00000572360 KRTAP20-2Q3LI61 65 aa0.89□□□□□ -2.27
TOM1L1-212ENST00000572360 KRTAP21-1Q3LI58 79 aa0.75□□□□□ -2.29
TOM1L1-212ENST00000572360 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
TOM1L1-212ENST00000572360 PHGR1C9JFL3 82 aa0.69□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 77.8 ms