RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 KRTAP12-4P60329 112 aa5.39□□□□□ -1.55
LITAF-209ENST00000571688 KRTAP4-3Q9BYR4 195 aa5.31□□□□□ -1.56
LITAF-209ENST00000571688 MT1GP13640 62 aa5.29□□□□□ -1.56
LITAF-209ENST00000571688 SSPOA2VEC9 5147 aa5.26□□□□□ -1.57
LITAF-209ENST00000571688 MT1MQ8N339 61 aa5.18□□□□□ -1.58
LITAF-209ENST00000571688 CRCT1Q9UGL9 99 aa5.14□□□□□ -1.59
LITAF-209ENST00000571688 KRTAP19-3Q7Z4W3 81 aa5.11□□□□□ -1.59
LITAF-209ENST00000571688 FCGBPQ9Y6R7 5405 aaPredicted RBP5.06□□□□□ -1.6
LITAF-209ENST00000571688 KRTAP19-6Q3LI70 58 aa5.05□□□□□ -1.6
LITAF-209ENST00000571688 MUC12Q9UKN1 5478 aa5.04□□□□□ -1.6
LITAF-209ENST00000571688 LCE3BQ5TA77 95 aa5□□□□□ -1.61
LITAF-209ENST00000571688 KRTAP4-9Q9BYQ8 210 aa4.99□□□□□ -1.61
LITAF-209ENST00000571688 MT1AP04731 61 aa4.98□□□□□ -1.61
LITAF-209ENST00000571688 KRTAP9-2Q9BYQ4 174 aa4.97□□□□□ -1.61
LITAF-209ENST00000571688 LCE5AQ5TCM9 118 aa4.88□□□□□ -1.63
LITAF-209ENST00000571688 SYNE1Q8NF91 8797 aaKnown RBP4.86□□□□□ -1.63
LITAF-209ENST00000571688 KRTAP5-5Q701N2 237 aaPredicted RBP4.86□□□□□ -1.63
LITAF-209ENST00000571688 LCE3DQ9BYE3 92 aa4.85□□□□□ -1.63
LITAF-209ENST00000571688 KRTAP9-7A8MTY7 169 aa4.84□□□□□ -1.63
LITAF-209ENST00000571688 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.83□□□□□ -1.64
LITAF-209ENST00000571688 PRM1P04553 51 aa4.83□□□□□ -1.64
LITAF-209ENST00000571688 LCE3EQ5T5B0 92 aa4.83□□□□□ -1.64
LITAF-209ENST00000571688 KRTAP9-6A0A140TA67 174 aa4.81□□□□□ -1.64
LITAF-209ENST00000571688 KRTAP6-1Q3LI64 71 aa4.8□□□□□ -1.64
LITAF-209ENST00000571688 DSTQ03001 7570 aaKnown RBP4.8□□□□□ -1.64
LITAF-209ENST00000571688 FSIP2Q5CZC0 6907 aa4.68□□□□□ -1.66
LITAF-209ENST00000571688 SPRR2FQ96RM1 72 aa4.67□□□□□ -1.66
LITAF-209ENST00000571688 KRTAP4-12Q9BQ66 201 aa4.61□□□□□ -1.67
LITAF-209ENST00000571688 KRTAP9-9Q9BYP9 154 aa4.59□□□□□ -1.68
LITAF-209ENST00000571688 KRTAP9-4Q9BYQ2 154 aa4.59□□□□□ -1.68
LITAF-209ENST00000571688 KRTAP6-2Q3LI66 62 aa4.56□□□□□ -1.68
LITAF-209ENST00000571688 KRTAP6-3Q3LI67 103 aa4.51□□□□□ -1.69
LITAF-209ENST00000571688 LCE1DQ5T752 114 aa4.41□□□□□ -1.7
LITAF-209ENST00000571688 MDN1Q9NU22 5596 aa4.37□□□□□ -1.71
LITAF-209ENST00000571688 SYNE2Q8WXH0 6885 aaKnown RBP4.33□□□□□ -1.72
LITAF-209ENST00000571688 KRTAP2-2Q9BYT5 123 aa4.32□□□□□ -1.72
LITAF-209ENST00000571688 MACF1Q9UPN3 7388 aaKnown RBP4.31□□□□□ -1.72
LITAF-209ENST00000571688 LCE1AQ5T7P2 110 aa4.3□□□□□ -1.72
LITAF-209ENST00000571688 KRTAP4-2Q9BYR5 136 aa4.25□□□□□ -1.73
LITAF-209ENST00000571688 MT3P25713 68 aa4.2□□□□□ -1.74
LITAF-209ENST00000571688 SPRR2AP35326 72 aa4.17□□□□□ -1.74
LITAF-209ENST00000571688 KRTAP5-9P26371 169 aa4.16□□□□□ -1.74
LITAF-209ENST00000571688 SPRR2EP22531 72 aa4.1□□□□□ -1.75
LITAF-209ENST00000571688 SPRR2BP35325 72 aa4.1□□□□□ -1.75
LITAF-209ENST00000571688 KRTAP4-11Q9BYQ6 195 aa4.1□□□□□ -1.75
LITAF-209ENST00000571688 OBSCNQ5VST9 7968 aa4.06□□□□□ -1.76
LITAF-209ENST00000571688 KRTAP5-3Q6L8H2 238 aa4.01□□□□□ -1.77
LITAF-209ENST00000571688 SPRR2DP22532 72 aa3.91□□□□□ -1.78
LITAF-209ENST00000571688 LCE1EQ5T753 118 aa3.86□□□□□ -1.79
LITAF-209ENST00000571688 LCE4AQ5TA78 99 aa3.86□□□□□ -1.79
LITAF-209ENST00000571688 KRTAP5-4Q6L8H1 288 aa3.74□□□□□ -1.81
LITAF-209ENST00000571688 LCE1FQ5T754 118 aa3.74□□□□□ -1.81
LITAF-209ENST00000571688 MUC5ACP98088 5654 aa3.68□□□□□ -1.82
LITAF-209ENST00000571688 KRTAP5-2Q701N4 177 aa3.6□□□□□ -1.83
LITAF-209ENST00000571688 KRTAP5-10Q6L8G5 202 aa3.52□□□□□ -1.85
LITAF-209ENST00000571688 KRTAP20-2Q3LI61 65 aa3.51□□□□□ -1.85
LITAF-209ENST00000571688 NEBP20929 6669 aa3.5□□□□□ -1.85
LITAF-209ENST00000571688 MT4P47944 62 aa3.46□□□□□ -1.86
LITAF-209ENST00000571688 KRTAP5-1Q6L8H4 278 aa3.41□□□□□ -1.86
LITAF-209ENST00000571688 HMCN1Q96RW7 5635 aa3.32□□□□□ -1.88
LITAF-209ENST00000571688 LCE1BQ5T7P3 118 aa3.31□□□□□ -1.88
LITAF-209ENST00000571688 KRTAP20-1Q3LI63 56 aa3.2□□□□□ -1.9
LITAF-209ENST00000571688 LCE1CQ5T751 118 aa3.15□□□□□ -1.9
LITAF-209ENST00000571688 KRTAP21-1Q3LI58 79 aa3.11□□□□□ -1.91
LITAF-209ENST00000571688 KRTAP21-2Q3LI59 83 aa3.09□□□□□ -1.91
LITAF-209ENST00000571688 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.03□□□□□ -1.93
LITAF-209ENST00000571688 GPR98Q8WXG9 6306 aa2.98□□□□□ -1.93
LITAF-209ENST00000571688 KRTAP4-4Q9BYR3 166 aa2.8□□□□□ -1.96
LITAF-209ENST00000571688 MUC19Q7Z5P9 8384 aa2.8□□□□□ -1.96
LITAF-209ENST00000571688 KRTAP5-11Q6L8G4 156 aa2.73□□□□□ -1.97
LITAF-209ENST00000571688 MUC5BQ9HC84 5762 aaPredicted RBP2.69□□□□□ -1.98
LITAF-209ENST00000571688 KRTAP5-8O75690 187 aa2.69□□□□□ -1.98
LITAF-209ENST00000571688 KRTAP5-7Q6L8G8 165 aa2.69□□□□□ -1.98
LITAF-209ENST00000571688 AHNAK2Q8IVF2 5795 aa2.65□□□□□ -1.99
LITAF-209ENST00000571688 AHNAKQ09666 5890 aaKnown RBP2.32□□□□□ -2.04
LITAF-209ENST00000571688 PHGR1C9JFL3 82 aa2.3□□□□□ -2.04
LITAF-209ENST00000571688 MUC16Q8WXI7 14507 aa1.66□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 12.9 ms