RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 KRTAP4-8Q9BYQ9 185 aa5.33□□□□□ -1.56
SMG6-207ENST00000570756 KRTAP19-7Q3SYF9 63 aa5.29□□□□□ -1.56
SMG6-207ENST00000570756 KRTAP9-6A0A140TA67 174 aa5.29□□□□□ -1.56
SMG6-207ENST00000570756 MACF1Q9UPN3 7388 aaKnown RBP5.27□□□□□ -1.57
SMG6-207ENST00000570756 KRTAP4-7Q9BYR0 210 aa5.26□□□□□ -1.57
SMG6-207ENST00000570756 SYNE2Q8WXH0 6885 aaKnown RBP5.2□□□□□ -1.58
SMG6-207ENST00000570756 MT1LQ93083 61 aa5.18□□□□□ -1.58
SMG6-207ENST00000570756 MT1EP04732 61 aa5.13□□□□□ -1.59
SMG6-207ENST00000570756 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.03□□□□□ -1.6
SMG6-207ENST00000570756 MUC12Q9UKN1 5478 aa4.98□□□□□ -1.61
SMG6-207ENST00000570756 KRTAP12-4P60329 112 aa4.93□□□□□ -1.62
SMG6-207ENST00000570756 MDN1Q9NU22 5596 aa4.9□□□□□ -1.63
SMG6-207ENST00000570756 LOC100996750A0A140TA64 210 aa4.89□□□□□ -1.63
SMG6-207ENST00000570756 MT1GP13640 62 aa4.86□□□□□ -1.63
SMG6-207ENST00000570756 SPRR2FQ96RM1 72 aa4.84□□□□□ -1.64
SMG6-207ENST00000570756 KRTAP9-7A8MTY7 169 aa4.83□□□□□ -1.64
SMG6-207ENST00000570756 KRTAP4-3Q9BYR4 195 aa4.82□□□□□ -1.64
SMG6-207ENST00000570756 MT1MQ8N339 61 aa4.77□□□□□ -1.65
SMG6-207ENST00000570756 KRTAP6-3Q3LI67 103 aa4.76□□□□□ -1.65
SMG6-207ENST00000570756 KRTAP5-9P26371 169 aa4.75□□□□□ -1.65
SMG6-207ENST00000570756 KRTAP19-3Q7Z4W3 81 aa4.73□□□□□ -1.65
SMG6-207ENST00000570756 DSTQ03001 7570 aaKnown RBP4.64□□□□□ -1.67
SMG6-207ENST00000570756 SPRR2EP22531 72 aa4.62□□□□□ -1.67
SMG6-207ENST00000570756 SPRR2BP35325 72 aa4.62□□□□□ -1.67
SMG6-207ENST00000570756 SPRR2AP35326 72 aa4.62□□□□□ -1.67
SMG6-207ENST00000570756 LCE1AQ5T7P2 110 aa4.62□□□□□ -1.67
SMG6-207ENST00000570756 NEBP20929 6669 aa4.62□□□□□ -1.67
SMG6-207ENST00000570756 LCE3BQ5TA77 95 aa4.6□□□□□ -1.67
SMG6-207ENST00000570756 MT1AP04731 61 aa4.59□□□□□ -1.67
SMG6-207ENST00000570756 KRTAP4-9Q9BYQ8 210 aa4.51□□□□□ -1.69
SMG6-207ENST00000570756 LCE5AQ5TCM9 118 aa4.51□□□□□ -1.69
SMG6-207ENST00000570756 LCE3DQ9BYE3 92 aa4.48□□□□□ -1.69
SMG6-207ENST00000570756 LCE3EQ5T5B0 92 aa4.46□□□□□ -1.7
SMG6-207ENST00000570756 SPRR2DP22532 72 aa4.45□□□□□ -1.7
SMG6-207ENST00000570756 PRM1P04553 51 aa4.41□□□□□ -1.7
SMG6-207ENST00000570756 KRTAP6-1Q3LI64 71 aa4.39□□□□□ -1.71
SMG6-207ENST00000570756 KRTAP5-5Q701N2 237 aaPredicted RBP4.38□□□□□ -1.71
SMG6-207ENST00000570756 SYNE1Q8NF91 8797 aaKnown RBP4.35□□□□□ -1.71
SMG6-207ENST00000570756 KRTAP20-1Q3LI63 56 aa4.23□□□□□ -1.73
SMG6-207ENST00000570756 KRTAP6-2Q3LI66 62 aa4.16□□□□□ -1.74
SMG6-207ENST00000570756 KRTAP2-2Q9BYT5 123 aa4.11□□□□□ -1.75
SMG6-207ENST00000570756 KRTAP9-4Q9BYQ2 154 aa4.06□□□□□ -1.76
SMG6-207ENST00000570756 MT4P47944 62 aa3.95□□□□□ -1.78
SMG6-207ENST00000570756 HMCN1Q96RW7 5635 aa3.93□□□□□ -1.78
SMG6-207ENST00000570756 MT3P25713 68 aa3.91□□□□□ -1.78
SMG6-207ENST00000570756 KRTAP5-4Q6L8H1 288 aa3.91□□□□□ -1.78
SMG6-207ENST00000570756 KRTAP4-6Q9BYQ5 205 aa3.89□□□□□ -1.79
SMG6-207ENST00000570756 LCE1DQ5T752 114 aa3.87□□□□□ -1.79
SMG6-207ENST00000570756 LCE4AQ5TA78 99 aa3.84□□□□□ -1.8
SMG6-207ENST00000570756 KRTAP20-2Q3LI61 65 aa3.71□□□□□ -1.82
SMG6-207ENST00000570756 OBSCNQ5VST9 7968 aa3.71□□□□□ -1.82
SMG6-207ENST00000570756 KRTAP5-3Q6L8H2 238 aa3.57□□□□□ -1.84
SMG6-207ENST00000570756 AHNAK2Q8IVF2 5795 aa3.53□□□□□ -1.84
SMG6-207ENST00000570756 KRTAP5-2Q701N4 177 aa3.51□□□□□ -1.85
SMG6-207ENST00000570756 LCE1EQ5T753 118 aa3.42□□□□□ -1.86
SMG6-207ENST00000570756 GPR98Q8WXG9 6306 aa3.38□□□□□ -1.87
SMG6-207ENST00000570756 MUC5ACP98088 5654 aa3.31□□□□□ -1.88
SMG6-207ENST00000570756 KRTAP5-10Q6L8G5 202 aa3.3□□□□□ -1.88
SMG6-207ENST00000570756 KRTAP4-11Q9BYQ6 195 aa3.28□□□□□ -1.89
SMG6-207ENST00000570756 KRTAP5-8O75690 187 aa3.16□□□□□ -1.9
SMG6-207ENST00000570756 KRTAP5-1Q6L8H4 278 aa3.12□□□□□ -1.91
SMG6-207ENST00000570756 LCE1BQ5T7P3 118 aa3.08□□□□□ -1.92
SMG6-207ENST00000570756 KRTAP5-7Q6L8G8 165 aa3.04□□□□□ -1.92
SMG6-207ENST00000570756 KRTAP4-2Q9BYR5 136 aa2.93□□□□□ -1.94
SMG6-207ENST00000570756 LCE1CQ5T751 118 aa2.93□□□□□ -1.94
SMG6-207ENST00000570756 MUC5BQ9HC84 5762 aaPredicted RBP2.92□□□□□ -1.94
SMG6-207ENST00000570756 KRTAP9-9Q9BYP9 154 aa2.87□□□□□ -1.95
SMG6-207ENST00000570756 KRTAP21-1Q3LI58 79 aa2.82□□□□□ -1.96
SMG6-207ENST00000570756 KRTAP21-2Q3LI59 83 aa2.82□□□□□ -1.96
SMG6-207ENST00000570756 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.8□□□□□ -1.96
SMG6-207ENST00000570756 LCE1FQ5T754 118 aa2.74□□□□□ -1.97
SMG6-207ENST00000570756 AHNAKQ09666 5890 aaKnown RBP2.71□□□□□ -1.98
SMG6-207ENST00000570756 KRTAP4-12Q9BQ66 201 aa2.62□□□□□ -1.99
SMG6-207ENST00000570756 KRTAP4-4Q9BYR3 166 aa2.55□□□□□ -2
SMG6-207ENST00000570756 KRTAP5-11Q6L8G4 156 aa2.53□□□□□ -2
SMG6-207ENST00000570756 MUC19Q7Z5P9 8384 aa2.52□□□□□ -2.01
SMG6-207ENST00000570756 PHGR1C9JFL3 82 aa2.21□□□□□ -2.06
SMG6-207ENST00000570756 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 84.4 ms