RNA–Protein interactions for RNA: ENST00000570688.1

ABR-208, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 2

Gene ABR, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-208ENST00000570688 MT1LQ93083 61 aa4□□□□□ -1.77
ABR-208ENST00000570688 CDC42SE1Q9NRR8 79 aa3.99□□□□□ -1.77
ABR-208ENST00000570688 H3BS24 57 aa3.97□□□□□ -1.77
ABR-208ENST00000570688 K7ERS5 55 aa3.97□□□□□ -1.77
ABR-208ENST00000570688 KRTAP25-1Q3LHN0 102 aa3.97□□□□□ -1.77
ABR-208ENST00000570688 A0A0A0MQY5 61 aa3.94□□□□□ -1.78
ABR-208ENST00000570688 MT1GP13640 62 aa3.94□□□□□ -1.78
ABR-208ENST00000570688 LCE3BQ5TA77 95 aa3.94□□□□□ -1.78
ABR-208ENST00000570688 MT1MQ8N339 61 aa3.94□□□□□ -1.78
ABR-208ENST00000570688 KRTAP12-3P60328 96 aa3.93□□□□□ -1.78
ABR-208ENST00000570688 KRTAP4-3Q9BYR4 195 aa3.92□□□□□ -1.78
ABR-208ENST00000570688 KRTAP2-2Q9BYT5 123 aa3.92□□□□□ -1.78
ABR-208ENST00000570688 KRTAP2-1Q9BYU5 128 aa3.92□□□□□ -1.78
ABR-208ENST00000570688 PMAIP1Q13794 54 aa3.9□□□□□ -1.79
ABR-208ENST00000570688 KRTAP4-7Q9BYR0 210 aa3.89□□□□□ -1.79
ABR-208ENST00000570688 ROMO1P60602 79 aa3.87□□□□□ -1.79
ABR-208ENST00000570688 DSTQ03001 7570 aaKnown RBP3.87□□□□□ -1.79
ABR-208ENST00000570688 KRTAP23-1A1A580 65 aa3.83□□□□□ -1.8
ABR-208ENST00000570688 PP632Q6XCG6 107 aa3.81□□□□□ -1.8
ABR-208ENST00000570688 BRK1Q8WUW1 75 aa3.75□□□□□ -1.81
ABR-208ENST00000570688 KRTAP15-1Q3LI76 137 aa3.74□□□□□ -1.81
ABR-208ENST00000570688 KRTAP4-9Q9BYQ8 210 aa3.67□□□□□ -1.82
ABR-208ENST00000570688 LOC100996750A0A140TA64 210 aa3.66□□□□□ -1.82
ABR-208ENST00000570688 LCE3CQ5T5A8 94 aa3.65□□□□□ -1.83
ABR-208ENST00000570688 KRTAP5-4Q6L8H1 288 aa3.65□□□□□ -1.83
ABR-208ENST00000570688 KTN1-AS1Q86SY8 53 aa3.65□□□□□ -1.83
ABR-208ENST00000570688 GPR98Q8WXG9 6306 aa3.63□□□□□ -1.83
ABR-208ENST00000570688 KRTAP5-5Q701N2 237 aaPredicted RBP3.63□□□□□ -1.83
ABR-208ENST00000570688 KRTAP19-4Q3LI73 84 aa3.6□□□□□ -1.83
ABR-208ENST00000570688 LCE1DQ5T752 114 aa3.6□□□□□ -1.83
ABR-208ENST00000570688 LCE4AQ5TA78 99 aa3.59□□□□□ -1.83
ABR-208ENST00000570688 KRTAP9-6A8MVA2 160 aa3.58□□□□□ -1.84
ABR-208ENST00000570688 MT4P47944 62 aa3.56□□□□□ -1.84
ABR-208ENST00000570688 KRTAP4-6Q9BYQ5 205 aa3.55□□□□□ -1.84
ABR-208ENST00000570688 HMCN1Q96RW7 5635 aa3.5□□□□□ -1.85
ABR-208ENST00000570688 PRAC1Q96KF2 57 aa3.47□□□□□ -1.85
ABR-208ENST00000570688 SYNE1Q8NF91 8797 aaKnown RBP3.44□□□□□ -1.86
ABR-208ENST00000570688 KRTAP20-2Q3LI61 65 aa3.41□□□□□ -1.86
ABR-208ENST00000570688 KRTAP6-1Q3LI64 71 aa3.4□□□□□ -1.87
ABR-208ENST00000570688 MT1AP04731 61 aa3.39□□□□□ -1.87
ABR-208ENST00000570688 SPRR5A0A1B0GTR4 108 aa3.37□□□□□ -1.87
ABR-208ENST00000570688 KRTAP5-3Q6L8H2 238 aa3.35□□□□□ -1.87
ABR-208ENST00000570688 AHNAK2Q8IVF2 5795 aa3.34□□□□□ -1.88
ABR-208ENST00000570688 KRTAP12-4P60329 112 aa3.32□□□□□ -1.88
ABR-208ENST00000570688 KRTAP5-10Q6L8G5 202 aa3.26□□□□□ -1.89
ABR-208ENST00000570688 LUZP6Q538Z0 58 aa3.25□□□□□ -1.89
ABR-208ENST00000570688 KRTAP5-2Q701N4 177 aa3.25□□□□□ -1.89
ABR-208ENST00000570688 KRTAP9-4Q9BYQ2 154 aa3.25□□□□□ -1.89
ABR-208ENST00000570688 KRTAP6-2Q3LI66 62 aa3.18□□□□□ -1.9
ABR-208ENST00000570688 KRTAP5-7Q6L8G8 165 aa3.07□□□□□ -1.92
ABR-208ENST00000570688 KRTAP4-11Q9BYQ6 195 aa3.04□□□□□ -1.92
ABR-208ENST00000570688 MT3P25713 68 aa3.03□□□□□ -1.92
ABR-208ENST00000570688 KRTAP5-8O75690 187 aa2.99□□□□□ -1.93
ABR-208ENST00000570688 OBSCNQ5VST9 7968 aa2.96□□□□□ -1.94
ABR-208ENST00000570688 NDUFAF8A1L188 74 aa2.95□□□□□ -1.94
ABR-208ENST00000570688 KRTAP5-1Q6L8H4 278 aa2.88□□□□□ -1.95
ABR-208ENST00000570688 AHNAKQ09666 5890 aaKnown RBP2.76□□□□□ -1.97
ABR-208ENST00000570688 MUC5ACP98088 5654 aa2.75□□□□□ -1.97
ABR-208ENST00000570688 LCE1EQ5T753 118 aa2.74□□□□□ -1.97
ABR-208ENST00000570688 KRTAP4-2Q9BYR5 136 aa2.68□□□□□ -1.98
ABR-208ENST00000570688 MUC5BQ9HC84 5762 aaPredicted RBP2.68□□□□□ -1.98
ABR-208ENST00000570688 KRTAP9-9Q9BYP9 154 aa2.67□□□□□ -1.98
ABR-208ENST00000570688 INE1O15225 51 aa2.63□□□□□ -1.99
ABR-208ENST00000570688 LCE3DQ9BYE3 92 aa2.63□□□□□ -1.99
ABR-208ENST00000570688 LCE1BQ5T7P3 118 aa2.58□□□□□ -2
ABR-208ENST00000570688 LCE1CQ5T751 118 aa2.56□□□□□ -2
ABR-208ENST00000570688 LCE3EQ5T5B0 92 aa2.51□□□□□ -2.01
ABR-208ENST00000570688 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.38□□□□□ -2.03
ABR-208ENST00000570688 KRTAP4-12Q9BQ66 201 aa2.33□□□□□ -2.04
ABR-208ENST00000570688 KRTAP5-11Q6L8G4 156 aa2.32□□□□□ -2.04
ABR-208ENST00000570688 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
ABR-208ENST00000570688 LCE1FQ5T754 118 aa2.15□□□□□ -2.07
ABR-208ENST00000570688 KRTAP4-4Q9BYR3 166 aa2.04□□□□□ -2.08
ABR-208ENST00000570688 PRM1P04553 51 aa2.03□□□□□ -2.08
ABR-208ENST00000570688 PHGR1C9JFL3 82 aa2.01□□□□□ -2.09
ABR-208ENST00000570688 MUC19Q7Z5P9 8384 aa1.81□□□□□ -2.12
ABR-208ENST00000570688 KRTAP21-1Q3LI58 79 aa1.4□□□□□ -2.19
ABR-208ENST00000570688 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 393.2 ms