RNA–Protein interactions for RNA: ENST00000570001.5

PDXDC1-217, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 4,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-217ENST00000570001 SPRR2BP35325 72 aa3.96□□□□□ -1.78
PDXDC1-217ENST00000570001 SPRR2AP35326 72 aa3.96□□□□□ -1.78
PDXDC1-217ENST00000570001 MT1GP13640 62 aa3.94□□□□□ -1.78
PDXDC1-217ENST00000570001 SSPOA2VEC9 5147 aa3.92□□□□□ -1.78
PDXDC1-217ENST00000570001 KRTAP19-3Q7Z4W3 81 aa3.91□□□□□ -1.78
PDXDC1-217ENST00000570001 KRTAP9-2Q9BYQ4 174 aa3.85□□□□□ -1.79
PDXDC1-217ENST00000570001 MT1MQ8N339 61 aa3.83□□□□□ -1.8
PDXDC1-217ENST00000570001 SPRR2DP22532 72 aa3.83□□□□□ -1.8
PDXDC1-217ENST00000570001 KRTAP9-6A8MVA2 160 aa3.81□□□□□ -1.8
PDXDC1-217ENST00000570001 KRTAP4-3Q9BYR4 195 aa3.81□□□□□ -1.8
PDXDC1-217ENST00000570001 FCGBPQ9Y6R7 5405 aaPredicted RBP3.77□□□□□ -1.81
PDXDC1-217ENST00000570001 LOC100996750A0A140TA64 210 aa3.76□□□□□ -1.81
PDXDC1-217ENST00000570001 SYNE1Q8NF91 8797 aaKnown RBP3.71□□□□□ -1.82
PDXDC1-217ENST00000570001 MUC12Q9UKN1 5478 aa3.69□□□□□ -1.82
PDXDC1-217ENST00000570001 KRTAP2-3P0C7H8 128 aa3.67□□□□□ -1.82
PDXDC1-217ENST00000570001 KRTAP12-4P60329 112 aa3.67□□□□□ -1.82
PDXDC1-217ENST00000570001 KRTAP2-4Q9BYR9 128 aa3.67□□□□□ -1.82
PDXDC1-217ENST00000570001 KRTAP2-1Q9BYU5 128 aa3.67□□□□□ -1.82
PDXDC1-217ENST00000570001 MACF1Q9UPN3 7388 aaKnown RBP3.66□□□□□ -1.82
PDXDC1-217ENST00000570001 LCE3BQ5TA77 95 aa3.65□□□□□ -1.83
PDXDC1-217ENST00000570001 LCE5AQ5TCM9 118 aa3.65□□□□□ -1.83
PDXDC1-217ENST00000570001 DSTQ03001 7570 aaKnown RBP3.63□□□□□ -1.83
PDXDC1-217ENST00000570001 SYNE2Q8WXH0 6885 aaKnown RBP3.63□□□□□ -1.83
PDXDC1-217ENST00000570001 KRTAP9-6A0A140TA67 174 aa3.58□□□□□ -1.84
PDXDC1-217ENST00000570001 LCE1AQ5T7P2 110 aa3.53□□□□□ -1.84
PDXDC1-217ENST00000570001 MT1AP04731 61 aa3.45□□□□□ -1.86
PDXDC1-217ENST00000570001 KRTAP5-9P26371 169 aa3.44□□□□□ -1.86
PDXDC1-217ENST00000570001 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.42□□□□□ -1.86
PDXDC1-217ENST00000570001 KRTAP6-3Q3LI67 103 aa3.42□□□□□ -1.86
PDXDC1-217ENST00000570001 MT4P47944 62 aa3.41□□□□□ -1.86
PDXDC1-217ENST00000570001 KRTAP6-1Q3LI64 71 aa3.41□□□□□ -1.86
PDXDC1-217ENST00000570001 LCE3DQ9BYE3 92 aa3.4□□□□□ -1.87
PDXDC1-217ENST00000570001 KRTAP9-7A8MTY7 169 aa3.37□□□□□ -1.87
PDXDC1-217ENST00000570001 MDN1Q9NU22 5596 aa3.36□□□□□ -1.87
PDXDC1-217ENST00000570001 KRTAP4-9Q9BYQ8 210 aa3.35□□□□□ -1.87
PDXDC1-217ENST00000570001 LCE3EQ5T5B0 92 aa3.33□□□□□ -1.88
PDXDC1-217ENST00000570001 KRTAP20-1Q3LI63 56 aa3.28□□□□□ -1.88
PDXDC1-217ENST00000570001 MT3P25713 68 aa3.27□□□□□ -1.89
PDXDC1-217ENST00000570001 KRTAP9-4Q9BYQ2 154 aa3.23□□□□□ -1.89
PDXDC1-217ENST00000570001 OBSCNQ5VST9 7968 aa3.23□□□□□ -1.89
PDXDC1-217ENST00000570001 KRTAP6-2Q3LI66 62 aa3.17□□□□□ -1.9
PDXDC1-217ENST00000570001 LCE1DQ5T752 114 aa3.15□□□□□ -1.91
PDXDC1-217ENST00000570001 LCE1BQ5T7P3 118 aa3.15□□□□□ -1.91
PDXDC1-217ENST00000570001 KRTAP5-5Q701N2 237 aaPredicted RBP3.13□□□□□ -1.91
PDXDC1-217ENST00000570001 NEBP20929 6669 aa3.1□□□□□ -1.91
PDXDC1-217ENST00000570001 PRM1P04553 51 aa3.07□□□□□ -1.92
PDXDC1-217ENST00000570001 KRTAP2-2Q9BYT5 123 aa3.07□□□□□ -1.92
PDXDC1-217ENST00000570001 LCE4AQ5TA78 99 aa3.04□□□□□ -1.92
PDXDC1-217ENST00000570001 KRTAP4-6Q9BYQ5 205 aa2.94□□□□□ -1.94
PDXDC1-217ENST00000570001 KRTAP20-2Q3LI61 65 aa2.87□□□□□ -1.95
PDXDC1-217ENST00000570001 KRTAP5-4Q6L8H1 288 aa2.87□□□□□ -1.95
PDXDC1-217ENST00000570001 GPR98Q8WXG9 6306 aa2.82□□□□□ -1.96
PDXDC1-217ENST00000570001 HMCN1Q96RW7 5635 aa2.68□□□□□ -1.98
PDXDC1-217ENST00000570001 LCE1CQ5T751 118 aa2.67□□□□□ -1.98
PDXDC1-217ENST00000570001 LCE1EQ5T753 118 aa2.67□□□□□ -1.98
PDXDC1-217ENST00000570001 LCE1FQ5T754 118 aa2.67□□□□□ -1.98
PDXDC1-217ENST00000570001 MUC19Q7Z5P9 8384 aa2.63□□□□□ -1.99
PDXDC1-217ENST00000570001 KRTAP5-2Q701N4 177 aa2.62□□□□□ -1.99
PDXDC1-217ENST00000570001 KRTAP9-9Q9BYP9 154 aa2.61□□□□□ -1.99
PDXDC1-217ENST00000570001 KRTAP5-3Q6L8H2 238 aa2.57□□□□□ -2
PDXDC1-217ENST00000570001 KRTAP4-11Q9BYQ6 195 aa2.47□□□□□ -2.01
PDXDC1-217ENST00000570001 MUC5ACP98088 5654 aa2.43□□□□□ -2.02
PDXDC1-217ENST00000570001 KRTAP4-2Q9BYR5 136 aa2.28□□□□□ -2.04
PDXDC1-217ENST00000570001 KRTAP5-1Q6L8H4 278 aa2.27□□□□□ -2.05
PDXDC1-217ENST00000570001 KRTAP4-12Q9BQ66 201 aa2.26□□□□□ -2.05
PDXDC1-217ENST00000570001 KRTAP5-10Q6L8G5 202 aa2.24□□□□□ -2.05
PDXDC1-217ENST00000570001 AHNAK2Q8IVF2 5795 aa2.23□□□□□ -2.05
PDXDC1-217ENST00000570001 KRTAP5-8O75690 187 aa2.21□□□□□ -2.05
PDXDC1-217ENST00000570001 KRTAP4-4Q9BYR3 166 aa2.2□□□□□ -2.06
PDXDC1-217ENST00000570001 KRTAP21-2Q3LI59 83 aa2.08□□□□□ -2.08
PDXDC1-217ENST00000570001 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.08□□□□□ -2.08
PDXDC1-217ENST00000570001 KRTAP5-7Q6L8G8 165 aa2.04□□□□□ -2.08
PDXDC1-217ENST00000570001 KRTAP5-11Q6L8G4 156 aa2.02□□□□□ -2.09
PDXDC1-217ENST00000570001 MUC5BQ9HC84 5762 aaPredicted RBP1.98□□□□□ -2.09
PDXDC1-217ENST00000570001 AHNAKQ09666 5890 aaKnown RBP1.87□□□□□ -2.11
PDXDC1-217ENST00000570001 PHGR1C9JFL3 82 aa1.74□□□□□ -2.13
PDXDC1-217ENST00000570001 KRTAP21-1Q3LI58 79 aa1.69□□□□□ -2.14
PDXDC1-217ENST00000570001 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 15.6 ms