RNA–Protein interactions for RNA: ENST00000568883.5

PKM-222, Transcript of pyruvate kinase M1/2, human

TSL 5 BASIC

Gene PKM, Length 1,863 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-222	ENST00000568883	KRTAP4-8	Q9BYQ9	185 aa		4.55	□□□□□ -1.68
PKM-222	ENST00000568883	KRTAP19-7	Q3SYF9	63 aa		4.51	□□□□□ -1.69
PKM-222	ENST00000568883	MT1E	P04732	61 aa		4.42	□□□□□ -1.7
PKM-222	ENST00000568883	MT1L	Q93083	61 aa		4.41	□□□□□ -1.7
PKM-222	ENST00000568883	KMT2D	O14686	5537 aa		4.39	□□□□□ -1.71
PKM-222	ENST00000568883	KRTAP9-6	A8MVA2	160 aa		4.38	□□□□□ -1.71
PKM-222	ENST00000568883	NEB	P20929	6669 aa		4.36	□□□□□ -1.71
PKM-222	ENST00000568883	KRTAP20-1	Q3LI63	56 aa		4.36	□□□□□ -1.71
PKM-222	ENST00000568883	KRTAP2-3	P0C7H8	128 aa		4.32	□□□□□ -1.72
PKM-222	ENST00000568883	KRTAP2-4	Q9BYR9	128 aa		4.32	□□□□□ -1.72
PKM-222	ENST00000568883	KRTAP2-1	Q9BYU5	128 aa		4.32	□□□□□ -1.72
PKM-222	ENST00000568883	KRTAP4-7	Q9BYR0	210 aa		4.31	□□□□□ -1.72
PKM-222	ENST00000568883	MUC12	Q9UKN1	5478 aa		4.22	□□□□□ -1.73
PKM-222	ENST00000568883	KRTAP5-9	P26371	169 aa		4.2	□□□□□ -1.74
PKM-222	ENST00000568883	MT1G	P13640	62 aa		4.18	□□□□□ -1.74
PKM-222	ENST00000568883	KRTAP19-3	Q7Z4W3	81 aa		4.16	□□□□□ -1.74
PKM-222	ENST00000568883	MT1M	Q8N339	61 aa		4.13	□□□□□ -1.75
PKM-222	ENST00000568883	MDN1	Q9NU22	5596 aa		4.1	□□□□□ -1.75
PKM-222	ENST00000568883	SPRR2F	Q96RM1	72 aa		4.06	□□□□□ -1.76
PKM-222	ENST00000568883	KRTAP4-3	Q9BYR4	195 aa		4.05	□□□□□ -1.76
PKM-222	ENST00000568883	KRTAP2-2	Q9BYT5	123 aa		4.05	□□□□□ -1.76
PKM-222	ENST00000568883	LOC100996750	A0A140TA64	210 aa		4.03	□□□□□ -1.77
PKM-222	ENST00000568883	SPRR2E	P22531	72 aa		4.01	□□□□□ -1.77
PKM-222	ENST00000568883	SPRR2B	P35325	72 aa		4.01	□□□□□ -1.77
PKM-222	ENST00000568883	SPRR2A	P35326	72 aa		4.01	□□□□□ -1.77
PKM-222	ENST00000568883	LCE5A	Q5TCM9	118 aa		4.01	□□□□□ -1.77
PKM-222	ENST00000568883	LCE1A	Q5T7P2	110 aa		3.9	□□□□□ -1.78
PKM-222	ENST00000568883	KRTAP4-6	Q9BYQ5	205 aa		3.89	□□□□□ -1.79
PKM-222	ENST00000568883	SPRR2D	P22532	72 aa		3.88	□□□□□ -1.79
PKM-222	ENST00000568883	LCE3B	Q5TA77	95 aa		3.81	□□□□□ -1.8
PKM-222	ENST00000568883	KRTAP12-4	P60329	112 aa		3.79	□□□□□ -1.8
PKM-222	ENST00000568883	GPR98	Q8WXG9	6306 aa		3.78	□□□□□ -1.8
PKM-222	ENST00000568883	MT1A	P04731	61 aa		3.75	□□□□□ -1.81
PKM-222	ENST00000568883	KRTAP6-1	Q3LI64	71 aa		3.7	□□□□□ -1.82
PKM-222	ENST00000568883	DST	Q03001	7570 aa	Known RBP	3.66	□□□□□ -1.82
PKM-222	ENST00000568883	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.65	□□□□□ -1.82
PKM-222	ENST00000568883	LCE3D	Q9BYE3	92 aa		3.6	□□□□□ -1.83
PKM-222	ENST00000568883	KRTAP4-9	Q9BYQ8	210 aa		3.58	□□□□□ -1.84
PKM-222	ENST00000568883	LCE3E	Q5T5B0	92 aa		3.56	□□□□□ -1.84
PKM-222	ENST00000568883	KRTAP9-4	Q9BYQ2	154 aa		3.52	□□□□□ -1.85
PKM-222	ENST00000568883	LCE1D	Q5T752	114 aa		3.48	□□□□□ -1.85
PKM-222	ENST00000568883	SYNE1	Q8NF91	8797 aa	Known RBP	3.47	□□□□□ -1.85
PKM-222	ENST00000568883	LCE4A	Q5TA78	99 aa		3.45	□□□□□ -1.86
PKM-222	ENST00000568883	KRTAP5-10	Q6L8G5	202 aa		3.4	□□□□□ -1.87
PKM-222	ENST00000568883	MT3	P25713	68 aa		3.39	□□□□□ -1.87
PKM-222	ENST00000568883	MT4	P47944	62 aa		3.39	□□□□□ -1.87
PKM-222	ENST00000568883	HMCN1	Q96RW7	5635 aa		3.39	□□□□□ -1.87
PKM-222	ENST00000568883	KRTAP5-7	Q6L8G8	165 aa		3.34	□□□□□ -1.87
PKM-222	ENST00000568883	PRM1	P04553	51 aa		3.33	□□□□□ -1.88
PKM-222	ENST00000568883	KRTAP6-2	Q3LI66	62 aa		3.33	□□□□□ -1.88
PKM-222	ENST00000568883	AHNAK2	Q8IVF2	5795 aa		3.33	□□□□□ -1.88
PKM-222	ENST00000568883	KRTAP5-4	Q6L8H1	288 aa		3.29	□□□□□ -1.88
PKM-222	ENST00000568883	KRTAP5-3	Q6L8H2	238 aa		3.25	□□□□□ -1.89
PKM-222	ENST00000568883	KRTAP9-9	Q9BYP9	154 aa		3.21	□□□□□ -1.9
PKM-222	ENST00000568883	KRTAP4-12	Q9BQ66	201 aa		3.16	□□□□□ -1.9
PKM-222	ENST00000568883	KRTAP20-2	Q3LI61	65 aa		3.11	□□□□□ -1.91
PKM-222	ENST00000568883	KRTAP5-2	Q701N4	177 aa		3.03	□□□□□ -1.92
PKM-222	ENST00000568883	OBSCN	Q5VST9	7968 aa		3.01	□□□□□ -1.93
PKM-222	ENST00000568883	KRTAP4-2	Q9BYR5	136 aa		3.01	□□□□□ -1.93
PKM-222	ENST00000568883	KRTAP4-11	Q9BYQ6	195 aa		2.95	□□□□□ -1.94
PKM-222	ENST00000568883	AHNAK	Q09666	5890 aa	Known RBP	2.91	□□□□□ -1.94
PKM-222	ENST00000568883	MUC5AC	P98088	5654 aa		2.87	□□□□□ -1.95
PKM-222	ENST00000568883	KRTAP5-8	O75690	187 aa		2.83	□□□□□ -1.96
PKM-222	ENST00000568883	LCE1E	Q5T753	118 aa		2.81	□□□□□ -1.96
PKM-222	ENST00000568883	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.8	□□□□□ -1.96
PKM-222	ENST00000568883	LCE1B	Q5T7P3	118 aa		2.67	□□□□□ -1.98
PKM-222	ENST00000568883	LCE1C	Q5T751	118 aa		2.62	□□□□□ -1.99
PKM-222	ENST00000568883	KRTAP5-1	Q6L8H4	278 aa		2.61	□□□□□ -1.99
PKM-222	ENST00000568883	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.49	□□□□□ -2.01
PKM-222	ENST00000568883	KRTAP21-2	Q3LI59	83 aa		2.39	□□□□□ -2.03
PKM-222	ENST00000568883	KRTAP5-11	Q6L8G4	156 aa		2.26	□□□□□ -2.05
PKM-222	ENST00000568883	KRTAP21-1	Q3LI58	79 aa		2.11	□□□□□ -2.07
PKM-222	ENST00000568883	LCE1F	Q5T754	118 aa		2.11	□□□□□ -2.07
PKM-222	ENST00000568883	KRTAP4-4	Q9BYR3	166 aa		2.11	□□□□□ -2.07
PKM-222	ENST00000568883	PHGR1	C9JFL3	82 aa		2.01	□□□□□ -2.09
PKM-222	ENST00000568883	MUC19	Q7Z5P9	8384 aa		1.86	□□□□□ -2.11
PKM-222	ENST00000568883	MUC16	Q8WXI7	14507 aa		1.31	□□□□□ -2.2

Retrieved 77 of 20,778 RNA–protein pairs in 293.5 ms