RNA–Protein interactions for RNA: ENST00000568820.5

LYRM1-210, Transcript of LYR motif containing 1, humanhuman

TSL 1 (best)

Gene LYRM1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1-210ENST00000568820 KRTAP19-8Q3LI54 63 aa4.77□□□□□ -1.65
LYRM1-210ENST00000568820 TNP1P09430 55 aa4.74□□□□□ -1.65
LYRM1-210ENST00000568820 PP632Q6XCG6 107 aa4.73□□□□□ -1.65
LYRM1-210ENST00000568820 LCE3CQ5T5A8 94 aa4.7□□□□□ -1.66
LYRM1-210ENST00000568820 MT1BP07438 61 aa4.67□□□□□ -1.66
LYRM1-210ENST00000568820 KRTAP9-6A8MVA2 160 aa4.61□□□□□ -1.67
LYRM1-210ENST00000568820 PRO2289Q9P1D8 64 aa4.6□□□□□ -1.67
LYRM1-210ENST00000568820 MT1XP80297 61 aa4.57□□□□□ -1.68
LYRM1-210ENST00000568820 LCE3AQ5TA76 89 aa4.44□□□□□ -1.7
LYRM1-210ENST00000568820 KRTAP8-1Q8IUC2 63 aa4.38□□□□□ -1.71
LYRM1-210ENST00000568820 USH2AO75445 5202 aa4.36□□□□□ -1.71
LYRM1-210ENST00000568820 KRTAP5-1Q6L8H4 278 aa4.31□□□□□ -1.72
LYRM1-210ENST00000568820 KRTAP12-3P60328 96 aa4.29□□□□□ -1.72
LYRM1-210ENST00000568820 LCE3EQ5T5B0 92 aa4.29□□□□□ -1.72
LYRM1-210ENST00000568820 KRTAP19-6Q3LI70 58 aa4.26□□□□□ -1.73
LYRM1-210ENST00000568820 LUZP6Q538Z0 58 aa4.24□□□□□ -1.73
LYRM1-210ENST00000568820 SSPOA2VEC9 5147 aa4.22□□□□□ -1.73
LYRM1-210ENST00000568820 SPRR5A0A1B0GTR4 108 aa4.19□□□□□ -1.74
LYRM1-210ENST00000568820 KRTAP19-5Q3LI72 72 aa4.17□□□□□ -1.74
LYRM1-210ENST00000568820 KRTAP5-4Q6L8H1 288 aa4.1□□□□□ -1.75
LYRM1-210ENST00000568820 KRTAP4-4Q9BYR3 166 aa4.1□□□□□ -1.75
LYRM1-210ENST00000568820 KMT2DO14686 5537 aa4.08□□□□□ -1.76
LYRM1-210ENST00000568820 FSIP2Q5CZC0 6907 aa4.06□□□□□ -1.76
LYRM1-210ENST00000568820 KRTAP19-7Q3SYF9 63 aa4.06□□□□□ -1.76
LYRM1-210ENST00000568820 MT1EP04732 61 aa4□□□□□ -1.77
LYRM1-210ENST00000568820 FCGBPQ9Y6R7 5405 aaPredicted RBP3.99□□□□□ -1.77
LYRM1-210ENST00000568820 MT1LQ93083 61 aa3.94□□□□□ -1.78
LYRM1-210ENST00000568820 KRTAP5-9P26371 169 aa3.93□□□□□ -1.78
LYRM1-210ENST00000568820 CRCT1Q9UGL9 99 aa3.89□□□□□ -1.79
LYRM1-210ENST00000568820 MT1GP13640 62 aa3.82□□□□□ -1.8
LYRM1-210ENST00000568820 KRTAP19-3Q7Z4W3 81 aa3.82□□□□□ -1.8
LYRM1-210ENST00000568820 SPRR2FQ96RM1 72 aa3.81□□□□□ -1.8
LYRM1-210ENST00000568820 OBSCNQ5VST9 7968 aa3.79□□□□□ -1.8
LYRM1-210ENST00000568820 MACF1Q9UPN3 7388 aaKnown RBP3.75□□□□□ -1.81
LYRM1-210ENST00000568820 MT1MQ8N339 61 aa3.75□□□□□ -1.81
LYRM1-210ENST00000568820 MUC12Q9UKN1 5478 aa3.73□□□□□ -1.81
LYRM1-210ENST00000568820 KRTAP4-3Q9BYR4 195 aa3.71□□□□□ -1.82
LYRM1-210ENST00000568820 KRTAP5-5Q701N2 237 aaPredicted RBP3.65□□□□□ -1.82
LYRM1-210ENST00000568820 SYNE2Q8WXH0 6885 aaKnown RBP3.6□□□□□ -1.83
LYRM1-210ENST00000568820 KRTAP2-3P0C7H8 128 aa3.58□□□□□ -1.84
LYRM1-210ENST00000568820 KRTAP2-4Q9BYR9 128 aa3.58□□□□□ -1.84
LYRM1-210ENST00000568820 KRTAP2-1Q9BYU5 128 aa3.58□□□□□ -1.84
LYRM1-210ENST00000568820 SPRR2EP22531 72 aa3.57□□□□□ -1.84
LYRM1-210ENST00000568820 SPRR2BP35325 72 aa3.57□□□□□ -1.84
LYRM1-210ENST00000568820 SPRR2AP35326 72 aa3.57□□□□□ -1.84
LYRM1-210ENST00000568820 KRTAP6-3Q3LI67 103 aa3.57□□□□□ -1.84
LYRM1-210ENST00000568820 MDN1Q9NU22 5596 aa3.55□□□□□ -1.84
LYRM1-210ENST00000568820 INE1O15225 51 aa3.51□□□□□ -1.85
LYRM1-210ENST00000568820 LCE3DQ9BYE3 92 aa3.49□□□□□ -1.85
LYRM1-210ENST00000568820 SPRR2DP22532 72 aa3.44□□□□□ -1.86
LYRM1-210ENST00000568820 DSTQ03001 7570 aaKnown RBP3.42□□□□□ -1.86
LYRM1-210ENST00000568820 LCE1CQ5T751 118 aa3.41□□□□□ -1.86
LYRM1-210ENST00000568820 LCE1BQ5T7P3 118 aa3.41□□□□□ -1.86
LYRM1-210ENST00000568820 MT1AP04731 61 aa3.36□□□□□ -1.87
LYRM1-210ENST00000568820 KRTAP5-2Q701N4 177 aa3.33□□□□□ -1.88
LYRM1-210ENST00000568820 KRTAP6-1Q3LI64 71 aa3.3□□□□□ -1.88
LYRM1-210ENST00000568820 NEBP20929 6669 aa3.23□□□□□ -1.89
LYRM1-210ENST00000568820 KRTAP12-4P60329 112 aa3.14□□□□□ -1.91
LYRM1-210ENST00000568820 SYNE1Q8NF91 8797 aaKnown RBP3.11□□□□□ -1.91
LYRM1-210ENST00000568820 KRTAP20-1Q3LI63 56 aa3.06□□□□□ -1.92
LYRM1-210ENST00000568820 KRTAP6-2Q3LI66 62 aa3.02□□□□□ -1.93
LYRM1-210ENST00000568820 MT4P47944 62 aa2.96□□□□□ -1.94
LYRM1-210ENST00000568820 KRTAP20-2Q3LI61 65 aa2.92□□□□□ -1.94
LYRM1-210ENST00000568820 GPR98Q8WXG9 6306 aa2.85□□□□□ -1.95
LYRM1-210ENST00000568820 KRTAP5-7Q6L8G8 165 aa2.84□□□□□ -1.95
LYRM1-210ENST00000568820 HMCN1Q96RW7 5635 aa2.84□□□□□ -1.96
LYRM1-210ENST00000568820 MUC19Q7Z5P9 8384 aa2.73□□□□□ -1.97
LYRM1-210ENST00000568820 KRTAP5-8O75690 187 aa2.69□□□□□ -1.98
LYRM1-210ENST00000568820 PRM1P04553 51 aa2.66□□□□□ -1.98
LYRM1-210ENST00000568820 AHNAK2Q8IVF2 5795 aa2.48□□□□□ -2.01
LYRM1-210ENST00000568820 KRTAP5-10Q6L8G5 202 aa2.44□□□□□ -2.02
LYRM1-210ENST00000568820 MUC5ACP98088 5654 aa2.43□□□□□ -2.02
LYRM1-210ENST00000568820 KRTAP21-2Q3LI59 83 aa2.42□□□□□ -2.02
LYRM1-210ENST00000568820 AHNAKQ09666 5890 aaKnown RBP2.2□□□□□ -2.06
LYRM1-210ENST00000568820 MUC5BQ9HC84 5762 aaPredicted RBP2.12□□□□□ -2.07
LYRM1-210ENST00000568820 PHGR1C9JFL3 82 aa1.82□□□□□ -2.12
LYRM1-210ENST00000568820 KRTAP21-1Q3LI58 79 aa1.66□□□□□ -2.14
LYRM1-210ENST00000568820 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 11 ms