RNA–Protein interactions for RNA: ENST00000568743.1

PKM-221, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-221ENST00000568743 KRTAP5-9P26371 169 aa3.95□□□□□ -1.78
PKM-221ENST00000568743 C10orf95Q9H7T3 257 aa3.95□□□□□ -1.78
PKM-221ENST00000568743 KMT2DO14686 5537 aa3.94□□□□□ -1.78
PKM-221ENST00000568743 SPRR2FQ96RM1 72 aa3.93□□□□□ -1.78
PKM-221ENST00000568743 KRTAP20-1Q3LI63 56 aa3.92□□□□□ -1.78
PKM-221ENST00000568743 K7ERS5 55 aa3.91□□□□□ -1.78
PKM-221ENST00000568743 NEBP20929 6669 aa3.89□□□□□ -1.79
PKM-221ENST00000568743 MUC12Q9UKN1 5478 aa3.87□□□□□ -1.79
PKM-221ENST00000568743 TNP1P09430 55 aa3.86□□□□□ -1.79
PKM-221ENST00000568743 KRTAP25-1Q3LHN0 102 aa3.84□□□□□ -1.79
PKM-221ENST00000568743 KRTAP15-1Q3LI76 137 aa3.84□□□□□ -1.79
PKM-221ENST00000568743 KRTAP2-3P0C7H8 128 aa3.81□□□□□ -1.8
PKM-221ENST00000568743 SPRR2EP22531 72 aa3.81□□□□□ -1.8
PKM-221ENST00000568743 SPRR2BP35325 72 aa3.81□□□□□ -1.8
PKM-221ENST00000568743 SPRR2AP35326 72 aa3.81□□□□□ -1.8
PKM-221ENST00000568743 KRTAP2-4Q9BYR9 128 aa3.81□□□□□ -1.8
PKM-221ENST00000568743 LCE3AQ5TA76 89 aa3.8□□□□□ -1.8
PKM-221ENST00000568743 ROMO1P60602 79 aa3.78□□□□□ -1.8
PKM-221ENST00000568743 KRTAP19-7Q3SYF9 63 aa3.78□□□□□ -1.8
PKM-221ENST00000568743 LCE1AQ5T7P2 110 aa3.78□□□□□ -1.8
PKM-221ENST00000568743 KRTAP19-5Q3LI72 72 aa3.77□□□□□ -1.81
PKM-221ENST00000568743 MT1EP04732 61 aa3.75□□□□□ -1.81
PKM-221ENST00000568743 MDN1Q9NU22 5596 aa3.74□□□□□ -1.81
PKM-221ENST00000568743 SPRR2DP22532 72 aa3.68□□□□□ -1.82
PKM-221ENST00000568743 KRTAP2-2Q9BYT5 123 aa3.68□□□□□ -1.82
PKM-221ENST00000568743 KRTAP2-1Q9BYU5 128 aa3.68□□□□□ -1.82
PKM-221ENST00000568743 KRTAP19-3Q7Z4W3 81 aa3.66□□□□□ -1.82
PKM-221ENST00000568743 KRTAP12-3P60328 96 aa3.63□□□□□ -1.83
PKM-221ENST00000568743 MT1LQ93083 61 aa3.63□□□□□ -1.83
PKM-221ENST00000568743 MT1GP13640 62 aa3.58□□□□□ -1.84
PKM-221ENST00000568743 MT1MQ8N339 61 aa3.55□□□□□ -1.84
PKM-221ENST00000568743 PP632Q6XCG6 107 aa3.54□□□□□ -1.84
PKM-221ENST00000568743 KRTAP4-3Q9BYR4 195 aa3.5□□□□□ -1.85
PKM-221ENST00000568743 A0A0A0MQY5 61 aa3.44□□□□□ -1.86
PKM-221ENST00000568743 LCE3CQ5T5A8 94 aa3.37□□□□□ -1.87
PKM-221ENST00000568743 DSTQ03001 7570 aaKnown RBP3.35□□□□□ -1.87
PKM-221ENST00000568743 NDUFAF8A1L188 74 aa3.34□□□□□ -1.87
PKM-221ENST00000568743 GPR98Q8WXG9 6306 aa3.25□□□□□ -1.89
PKM-221ENST00000568743 KRTAP5-4Q6L8H1 288 aa3.23□□□□□ -1.89
PKM-221ENST00000568743 MT4P47944 62 aa3.22□□□□□ -1.89
PKM-221ENST00000568743 KRTAP5-5Q701N2 237 aaPredicted RBP3.22□□□□□ -1.89
PKM-221ENST00000568743 SPRR5A0A1B0GTR4 108 aa3.21□□□□□ -1.9
PKM-221ENST00000568743 KRTAP9-6A8MVA2 160 aa3.2□□□□□ -1.9
PKM-221ENST00000568743 LUZP6Q538Z0 58 aa3.12□□□□□ -1.91
PKM-221ENST00000568743 MT3P25713 68 aa3.11□□□□□ -1.91
PKM-221ENST00000568743 HMCN1Q96RW7 5635 aa3.07□□□□□ -1.92
PKM-221ENST00000568743 MT1AP04731 61 aa3.07□□□□□ -1.92
PKM-221ENST00000568743 KRTAP12-4P60329 112 aa3.07□□□□□ -1.92
PKM-221ENST00000568743 KRTAP6-1Q3LI64 71 aa3.06□□□□□ -1.92
PKM-221ENST00000568743 KRTAP20-2Q3LI61 65 aa3.05□□□□□ -1.92
PKM-221ENST00000568743 KRTAP5-10Q6L8G5 202 aa3.05□□□□□ -1.92
PKM-221ENST00000568743 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.01□□□□□ -1.93
PKM-221ENST00000568743 AHNAK2Q8IVF2 5795 aa3□□□□□ -1.93
PKM-221ENST00000568743 KRTAP5-7Q6L8G8 165 aa2.99□□□□□ -1.93
PKM-221ENST00000568743 SYNE1Q8NF91 8797 aaKnown RBP2.97□□□□□ -1.93
PKM-221ENST00000568743 KRTAP6-2Q3LI66 62 aa2.88□□□□□ -1.95
PKM-221ENST00000568743 KRTAP5-2Q701N4 177 aa2.87□□□□□ -1.95
PKM-221ENST00000568743 KRTAP5-11Q6L8G4 156 aa2.8□□□□□ -1.96
PKM-221ENST00000568743 INE1O15225 51 aa2.78□□□□□ -1.96
PKM-221ENST00000568743 LCE1EQ5T753 118 aa2.69□□□□□ -1.98
PKM-221ENST00000568743 KRTAP5-8O75690 187 aa2.62□□□□□ -1.99
PKM-221ENST00000568743 LCE1FQ5T754 118 aa2.6□□□□□ -1.99
PKM-221ENST00000568743 KRTAP5-1Q6L8H4 278 aa2.57□□□□□ -2
PKM-221ENST00000568743 OBSCNQ5VST9 7968 aa2.54□□□□□ -2
PKM-221ENST00000568743 AHNAKQ09666 5890 aaKnown RBP2.52□□□□□ -2.01
PKM-221ENST00000568743 KRTAP4-4Q9BYR3 166 aa2.52□□□□□ -2.01
PKM-221ENST00000568743 MUC5ACP98088 5654 aa2.51□□□□□ -2.01
PKM-221ENST00000568743 MUC5BQ9HC84 5762 aaPredicted RBP2.49□□□□□ -2.01
PKM-221ENST00000568743 LCE3DQ9BYE3 92 aa2.47□□□□□ -2.01
PKM-221ENST00000568743 LCE1BQ5T7P3 118 aa2.38□□□□□ -2.03
PKM-221ENST00000568743 LCE3EQ5T5B0 92 aa2.36□□□□□ -2.03
PKM-221ENST00000568743 LCE1CQ5T751 118 aa2.31□□□□□ -2.04
PKM-221ENST00000568743 PRM1P04553 51 aa2□□□□□ -2.09
PKM-221ENST00000568743 KRTAP21-2Q3LI59 83 aa2□□□□□ -2.09
PKM-221ENST00000568743 PHGR1C9JFL3 82 aa1.79□□□□□ -2.12
PKM-221ENST00000568743 MUC19Q7Z5P9 8384 aa1.56□□□□□ -2.16
PKM-221ENST00000568743 KRTAP21-1Q3LI58 79 aa1.4□□□□□ -2.19
PKM-221ENST00000568743 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 7.8 ms