RNA–Protein interactions for RNA: ENST00000568548.5

VAC14-210, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,945 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-210ENST00000568548 LOC100996750A0A140TA64 210 aa5.85□□□□□ -1.47
VAC14-210ENST00000568548 CRCT1Q9UGL9 99 aa5.84□□□□□ -1.47
VAC14-210ENST00000568548 MT1LQ93083 61 aa5.84□□□□□ -1.48
VAC14-210ENST00000568548 MT1EP04732 61 aa5.81□□□□□ -1.48
VAC14-210ENST00000568548 KRTAP2-3P0C7H8 128 aa5.78□□□□□ -1.48
VAC14-210ENST00000568548 KRTAP2-4Q9BYR9 128 aa5.78□□□□□ -1.48
VAC14-210ENST00000568548 KRTAP2-1Q9BYU5 128 aa5.78□□□□□ -1.48
VAC14-210ENST00000568548 SYNE1Q8NF91 8797 aaKnown RBP5.75□□□□□ -1.49
VAC14-210ENST00000568548 MT1GP13640 62 aa5.7□□□□□ -1.5
VAC14-210ENST00000568548 OBSCNQ5VST9 7968 aa5.63□□□□□ -1.51
VAC14-210ENST00000568548 KRTAP19-4Q3LI73 84 aa5.59□□□□□ -1.51
VAC14-210ENST00000568548 KRTAP9-2Q9BYQ4 174 aa5.59□□□□□ -1.51
VAC14-210ENST00000568548 MACF1Q9UPN3 7388 aaKnown RBP5.56□□□□□ -1.52
VAC14-210ENST00000568548 SYNE2Q8WXH0 6885 aaKnown RBP5.53□□□□□ -1.52
VAC14-210ENST00000568548 SPRR2FQ96RM1 72 aa5.47□□□□□ -1.53
VAC14-210ENST00000568548 KRTAP19-3Q7Z4W3 81 aa5.47□□□□□ -1.53
VAC14-210ENST00000568548 MT1MQ8N339 61 aa5.43□□□□□ -1.54
VAC14-210ENST00000568548 MDN1Q9NU22 5596 aa5.41□□□□□ -1.54
VAC14-210ENST00000568548 KRTAP12-4P60329 112 aa5.41□□□□□ -1.54
VAC14-210ENST00000568548 KRTAP4-9Q9BYQ8 210 aa5.38□□□□□ -1.55
VAC14-210ENST00000568548 LCE3BQ5TA77 95 aa5.34□□□□□ -1.55
VAC14-210ENST00000568548 LCE5AQ5TCM9 118 aa5.33□□□□□ -1.56
VAC14-210ENST00000568548 KRTAP5-9P26371 169 aa5.2□□□□□ -1.58
VAC14-210ENST00000568548 LCE1AQ5T7P2 110 aa5.15□□□□□ -1.59
VAC14-210ENST00000568548 SPRR2EP22531 72 aa5.08□□□□□ -1.6
VAC14-210ENST00000568548 SPRR2BP35325 72 aa5.08□□□□□ -1.6
VAC14-210ENST00000568548 SPRR2AP35326 72 aa5.08□□□□□ -1.6
VAC14-210ENST00000568548 KRTAP6-1Q3LI64 71 aa5.07□□□□□ -1.6
VAC14-210ENST00000568548 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.01□□□□□ -1.61
VAC14-210ENST00000568548 KRTAP9-6A0A140TA67 174 aa4.97□□□□□ -1.61
VAC14-210ENST00000568548 KRTAP6-3Q3LI67 103 aa4.94□□□□□ -1.62
VAC14-210ENST00000568548 KRTAP9-7A8MTY7 169 aa4.93□□□□□ -1.62
VAC14-210ENST00000568548 LCE3DQ9BYE3 92 aa4.9□□□□□ -1.63
VAC14-210ENST00000568548 SPRR2DP22532 72 aa4.88□□□□□ -1.63
VAC14-210ENST00000568548 PRM1P04553 51 aa4.83□□□□□ -1.64
VAC14-210ENST00000568548 KRTAP5-5Q701N2 237 aaPredicted RBP4.82□□□□□ -1.64
VAC14-210ENST00000568548 LCE3EQ5T5B0 92 aa4.81□□□□□ -1.64
VAC14-210ENST00000568548 MT1AP04731 61 aa4.81□□□□□ -1.64
VAC14-210ENST00000568548 NEBP20929 6669 aa4.65□□□□□ -1.67
VAC14-210ENST00000568548 KRTAP6-2Q3LI66 62 aa4.59□□□□□ -1.68
VAC14-210ENST00000568548 KRTAP9-4Q9BYQ2 154 aa4.56□□□□□ -1.68
VAC14-210ENST00000568548 KRTAP5-4Q6L8H1 288 aa4.41□□□□□ -1.7
VAC14-210ENST00000568548 MT3P25713 68 aa4.35□□□□□ -1.71
VAC14-210ENST00000568548 MT4P47944 62 aa4.3□□□□□ -1.72
VAC14-210ENST00000568548 KRTAP4-6Q9BYQ5 205 aa4.29□□□□□ -1.72
VAC14-210ENST00000568548 LCE4AQ5TA78 99 aa4.23□□□□□ -1.73
VAC14-210ENST00000568548 KRTAP2-2Q9BYT5 123 aa4.23□□□□□ -1.73
VAC14-210ENST00000568548 KRTAP20-2Q3LI61 65 aa4.16□□□□□ -1.74
VAC14-210ENST00000568548 HMCN1Q96RW7 5635 aa4.16□□□□□ -1.74
VAC14-210ENST00000568548 LCE1DQ5T752 114 aa4.11□□□□□ -1.75
VAC14-210ENST00000568548 KRTAP20-1Q3LI63 56 aa4.1□□□□□ -1.75
VAC14-210ENST00000568548 LCE1EQ5T753 118 aa4.08□□□□□ -1.76
VAC14-210ENST00000568548 KRTAP5-2Q701N4 177 aa4.06□□□□□ -1.76
VAC14-210ENST00000568548 KRTAP5-3Q6L8H2 238 aa3.97□□□□□ -1.77
VAC14-210ENST00000568548 MUC5ACP98088 5654 aa3.93□□□□□ -1.78
VAC14-210ENST00000568548 LCE1BQ5T7P3 118 aa3.8□□□□□ -1.8
VAC14-210ENST00000568548 LCE1FQ5T754 118 aa3.79□□□□□ -1.8
VAC14-210ENST00000568548 KRTAP4-11Q9BYQ6 195 aa3.73□□□□□ -1.81
VAC14-210ENST00000568548 MUC19Q7Z5P9 8384 aa3.62□□□□□ -1.83
VAC14-210ENST00000568548 KRTAP5-1Q6L8H4 278 aa3.5□□□□□ -1.85
VAC14-210ENST00000568548 KRTAP5-10Q6L8G5 202 aa3.49□□□□□ -1.85
VAC14-210ENST00000568548 AHNAK2Q8IVF2 5795 aa3.47□□□□□ -1.85
VAC14-210ENST00000568548 KRTAP4-2Q9BYR5 136 aa3.45□□□□□ -1.86
VAC14-210ENST00000568548 LCE1CQ5T751 118 aa3.43□□□□□ -1.86
VAC14-210ENST00000568548 KRTAP5-8O75690 187 aa3.38□□□□□ -1.87
VAC14-210ENST00000568548 KRTAP4-4Q9BYR3 166 aa3.29□□□□□ -1.88
VAC14-210ENST00000568548 KRTAP5-7Q6L8G8 165 aa3.26□□□□□ -1.89
VAC14-210ENST00000568548 MUC5BQ9HC84 5762 aaPredicted RBP3.23□□□□□ -1.89
VAC14-210ENST00000568548 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.2□□□□□ -1.9
VAC14-210ENST00000568548 KRTAP21-2Q3LI59 83 aa3.17□□□□□ -1.9
VAC14-210ENST00000568548 KRTAP4-12Q9BQ66 201 aa3.04□□□□□ -1.92
VAC14-210ENST00000568548 GPR98Q8WXG9 6306 aa3.03□□□□□ -1.92
VAC14-210ENST00000568548 KRTAP9-9Q9BYP9 154 aa2.99□□□□□ -1.93
VAC14-210ENST00000568548 KRTAP5-11Q6L8G4 156 aa2.97□□□□□ -1.93
VAC14-210ENST00000568548 KRTAP21-1Q3LI58 79 aa2.88□□□□□ -1.95
VAC14-210ENST00000568548 PHGR1C9JFL3 82 aa2.58□□□□□ -2
VAC14-210ENST00000568548 AHNAKQ09666 5890 aaKnown RBP2.45□□□□□ -2.02
VAC14-210ENST00000568548 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 95.5 ms