RNA–Protein interactions for RNA: ENST00000568459.5

PKM-220, Transcript of pyruvate kinase M1/2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKM, Length 1,806 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-220ENST00000568459 SPRR2FQ96RM1 72 aa5.37□□□□□ -1.55
PKM-220ENST00000568459 KRTAP20-1Q3LI63 56 aa5.37□□□□□ -1.55
PKM-220ENST00000568459 MDN1Q9NU22 5596 aa5.36□□□□□ -1.55
PKM-220ENST00000568459 LCE3CQ5T5A8 94 aa5.32□□□□□ -1.56
PKM-220ENST00000568459 SPRR2EP22531 72 aa5.3□□□□□ -1.56
PKM-220ENST00000568459 SPRR2BP35325 72 aa5.3□□□□□ -1.56
PKM-220ENST00000568459 SPRR2AP35326 72 aa5.3□□□□□ -1.56
PKM-220ENST00000568459 KRTAP19-4Q3LI73 84 aa5.3□□□□□ -1.56
PKM-220ENST00000568459 KRTAP4-8A0A0G2JLE6 195 aa5.27□□□□□ -1.57
PKM-220ENST00000568459 KRTAP19-5Q3LI72 72 aa5.27□□□□□ -1.57
PKM-220ENST00000568459 KRTAP4-8Q9BYQ9 185 aa5.27□□□□□ -1.57
PKM-220ENST00000568459 KRTAP2-3P0C7H8 128 aa5.24□□□□□ -1.57
PKM-220ENST00000568459 KRTAP2-4Q9BYR9 128 aa5.24□□□□□ -1.57
PKM-220ENST00000568459 LCE1AQ5T7P2 110 aa5.21□□□□□ -1.58
PKM-220ENST00000568459 SPRR2DP22532 72 aa5.12□□□□□ -1.59
PKM-220ENST00000568459 KRTAP2-1Q9BYU5 128 aa5.08□□□□□ -1.6
PKM-220ENST00000568459 KRTAP2-2Q9BYT5 123 aa5.07□□□□□ -1.6
PKM-220ENST00000568459 KRTAP9-6A8MVA2 160 aa5.04□□□□□ -1.6
PKM-220ENST00000568459 KRTAP19-7Q3SYF9 63 aa5.04□□□□□ -1.6
PKM-220ENST00000568459 LCE3BQ5TA77 95 aa4.97□□□□□ -1.61
PKM-220ENST00000568459 MT1LQ93083 61 aa4.93□□□□□ -1.62
PKM-220ENST00000568459 MT1EP04732 61 aa4.9□□□□□ -1.63
PKM-220ENST00000568459 LCE5AQ5TCM9 118 aa4.86□□□□□ -1.63
PKM-220ENST00000568459 KRTAP19-3Q7Z4W3 81 aa4.85□□□□□ -1.63
PKM-220ENST00000568459 KRTAP4-7Q9BYR0 210 aa4.82□□□□□ -1.64
PKM-220ENST00000568459 DSTQ03001 7570 aaKnown RBP4.76□□□□□ -1.65
PKM-220ENST00000568459 MT1GP13640 62 aa4.75□□□□□ -1.65
PKM-220ENST00000568459 MT1MQ8N339 61 aa4.65□□□□□ -1.67
PKM-220ENST00000568459 KRTAP4-9Q9BYQ8 210 aa4.62□□□□□ -1.67
PKM-220ENST00000568459 KRTAP4-3Q9BYR4 195 aa4.55□□□□□ -1.68
PKM-220ENST00000568459 LCE4AQ5TA78 99 aa4.53□□□□□ -1.68
PKM-220ENST00000568459 LCE1DQ5T752 114 aa4.51□□□□□ -1.69
PKM-220ENST00000568459 LOC100996750A0A140TA64 210 aa4.49□□□□□ -1.69
PKM-220ENST00000568459 MT4P47944 62 aa4.47□□□□□ -1.69
PKM-220ENST00000568459 GPR98Q8WXG9 6306 aa4.44□□□□□ -1.7
PKM-220ENST00000568459 KRTAP12-4P60329 112 aa4.42□□□□□ -1.7
PKM-220ENST00000568459 KRTAP5-4Q6L8H1 288 aa4.42□□□□□ -1.7
PKM-220ENST00000568459 HMCN1Q96RW7 5635 aa4.41□□□□□ -1.7
PKM-220ENST00000568459 MT1AP04731 61 aa4.35□□□□□ -1.71
PKM-220ENST00000568459 KRTAP4-6Q9BYQ5 205 aa4.33□□□□□ -1.72
PKM-220ENST00000568459 KRTAP5-5Q701N2 237 aaPredicted RBP4.24□□□□□ -1.73
PKM-220ENST00000568459 AHNAK2Q8IVF2 5795 aa4.24□□□□□ -1.73
PKM-220ENST00000568459 KRTAP20-2Q3LI61 65 aa4.18□□□□□ -1.74
PKM-220ENST00000568459 KRTAP5-10Q6L8G5 202 aa4.17□□□□□ -1.74
PKM-220ENST00000568459 KRTAP6-1Q3LI64 71 aa4.12□□□□□ -1.75
PKM-220ENST00000568459 LCE3DQ9BYE3 92 aa4.11□□□□□ -1.75
PKM-220ENST00000568459 LCE3EQ5T5B0 92 aa4.11□□□□□ -1.75
PKM-220ENST00000568459 KRTAP5-3Q6L8H2 238 aa4.09□□□□□ -1.75
PKM-220ENST00000568459 SYNE1Q8NF91 8797 aaKnown RBP4.04□□□□□ -1.76
PKM-220ENST00000568459 KRTAP5-7Q6L8G8 165 aa4.02□□□□□ -1.77
PKM-220ENST00000568459 PRM1P04553 51 aa3.91□□□□□ -1.78
PKM-220ENST00000568459 KRTAP9-4Q9BYQ2 154 aa3.91□□□□□ -1.78
PKM-220ENST00000568459 KRTAP5-2Q701N4 177 aa3.86□□□□□ -1.79
PKM-220ENST00000568459 KRTAP4-11Q9BYQ6 195 aa3.82□□□□□ -1.8
PKM-220ENST00000568459 KRTAP6-2Q3LI66 62 aa3.78□□□□□ -1.8
PKM-220ENST00000568459 MT3P25713 68 aa3.75□□□□□ -1.81
PKM-220ENST00000568459 KRTAP5-8O75690 187 aa3.67□□□□□ -1.82
PKM-220ENST00000568459 OBSCNQ5VST9 7968 aa3.64□□□□□ -1.83
PKM-220ENST00000568459 KRTAP9-9Q9BYP9 154 aa3.52□□□□□ -1.85
PKM-220ENST00000568459 MUC5BQ9HC84 5762 aaPredicted RBP3.48□□□□□ -1.85
PKM-220ENST00000568459 KRTAP4-12Q9BQ66 201 aa3.48□□□□□ -1.85
PKM-220ENST00000568459 MUC5ACP98088 5654 aa3.48□□□□□ -1.85
PKM-220ENST00000568459 AHNAKQ09666 5890 aaKnown RBP3.47□□□□□ -1.85
PKM-220ENST00000568459 KRTAP5-1Q6L8H4 278 aa3.47□□□□□ -1.85
PKM-220ENST00000568459 LCE1EQ5T753 118 aa3.35□□□□□ -1.87
PKM-220ENST00000568459 LCE1BQ5T7P3 118 aa3.16□□□□□ -1.9
PKM-220ENST00000568459 KRTAP4-2Q9BYR5 136 aa3.13□□□□□ -1.91
PKM-220ENST00000568459 LCE1CQ5T751 118 aa3.1□□□□□ -1.91
PKM-220ENST00000568459 LCE1FQ5T754 118 aa3.01□□□□□ -1.93
PKM-220ENST00000568459 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.81□□□□□ -1.96
PKM-220ENST00000568459 KRTAP5-11Q6L8G4 156 aa2.8□□□□□ -1.96
PKM-220ENST00000568459 KRTAP21-2Q3LI59 83 aa2.7□□□□□ -1.98
PKM-220ENST00000568459 KRTAP21-1Q3LI58 79 aa2.58□□□□□ -2
PKM-220ENST00000568459 PHGR1C9JFL3 82 aa2.45□□□□□ -2.02
PKM-220ENST00000568459 KRTAP4-4Q9BYR3 166 aa2.42□□□□□ -2.02
PKM-220ENST00000568459 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
PKM-220ENST00000568459 MUC16Q8WXI7 14507 aa1.57□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 53 ms