RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

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Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 KRTAP19-8Q3LI54 63 aa2.22□□□□□ -2.05
LINC01541-202ENST00000568095 LCE3AQ5TA76 89 aa2.2□□□□□ -2.06
LINC01541-202ENST00000568095 LCE1FQ5T754 118 aa2.2□□□□□ -2.06
LINC01541-202ENST00000568095 KRTAP8-1Q8IUC2 63 aa2.2□□□□□ -2.06
LINC01541-202ENST00000568095 SSPOA2VEC9 5147 aa2.19□□□□□ -2.06
LINC01541-202ENST00000568095 M0R2T5 61 aa2.19□□□□□ -2.06
LINC01541-202ENST00000568095 MT1BP07438 61 aa2.19□□□□□ -2.06
LINC01541-202ENST00000568095 KRTAP6-3Q3LI67 103 aa2.18□□□□□ -2.06
LINC01541-202ENST00000568095 GPR98Q8WXG9 6306 aa2.18□□□□□ -2.06
LINC01541-202ENST00000568095 KRTAP10-10P60014 251 aa2.17□□□□□ -2.06
LINC01541-202ENST00000568095 KRTAP2-2Q9BYT5 123 aa2.17□□□□□ -2.06
LINC01541-202ENST00000568095 USH2AO75445 5202 aa2.17□□□□□ -2.06
LINC01541-202ENST00000568095 KRTAP20-1Q3LI63 56 aa2.15□□□□□ -2.07
LINC01541-202ENST00000568095 KRTAP10-12P60413 245 aa2.15□□□□□ -2.07
LINC01541-202ENST00000568095 KRTAP5-4Q6L8H1 288 aa2.14□□□□□ -2.07
LINC01541-202ENST00000568095 MT1XP80297 61 aa2.11□□□□□ -2.07
LINC01541-202ENST00000568095 KRTAP10-5P60370 271 aa2.11□□□□□ -2.07
LINC01541-202ENST00000568095 LCE1EQ5T753 118 aa2.09□□□□□ -2.07
LINC01541-202ENST00000568095 KRTAP12-3P60328 96 aa2.09□□□□□ -2.08
LINC01541-202ENST00000568095 KRTAP5-11Q6L8G4 156 aa2.06□□□□□ -2.08
LINC01541-202ENST00000568095 KRTAP2-3P0C7H8 128 aa2.06□□□□□ -2.08
LINC01541-202ENST00000568095 KRTAP2-4Q9BYR9 128 aa2.06□□□□□ -2.08
LINC01541-202ENST00000568095 KRTAP19-6Q3LI70 58 aa2.05□□□□□ -2.08
LINC01541-202ENST00000568095 KRTAP10-7P60409 375 aaPredicted RBP2.05□□□□□ -2.08
LINC01541-202ENST00000568095 LCE3CQ5T5A8 94 aa2.03□□□□□ -2.08
LINC01541-202ENST00000568095 FCGBPQ9Y6R7 5405 aaPredicted RBP2□□□□□ -2.09
LINC01541-202ENST00000568095 KRTAP2-1Q9BYU5 128 aa2□□□□□ -2.09
LINC01541-202ENST00000568095 KMT2DO14686 5537 aa1.99□□□□□ -2.09
LINC01541-202ENST00000568095 KRTAP9-6A8MVA2 160 aa1.96□□□□□ -2.1
LINC01541-202ENST00000568095 KRTAP19-5Q3LI72 72 aa1.95□□□□□ -2.1
LINC01541-202ENST00000568095 NEBP20929 6669 aa1.94□□□□□ -2.1
LINC01541-202ENST00000568095 FSIP2Q5CZC0 6907 aa1.92□□□□□ -2.1
LINC01541-202ENST00000568095 KRTAP19-7Q3SYF9 63 aa1.89□□□□□ -2.11
LINC01541-202ENST00000568095 KRTAP4-4Q9BYR3 166 aa1.89□□□□□ -2.11
LINC01541-202ENST00000568095 KRTAP5-1Q6L8H4 278 aa1.86□□□□□ -2.11
LINC01541-202ENST00000568095 MACF1Q9UPN3 7388 aaKnown RBP1.86□□□□□ -2.11
LINC01541-202ENST00000568095 LCE3EQ5T5B0 92 aa1.86□□□□□ -2.11
LINC01541-202ENST00000568095 MT1EP04732 61 aa1.84□□□□□ -2.11
LINC01541-202ENST00000568095 KRTAP5-7Q6L8G8 165 aa1.84□□□□□ -2.12
LINC01541-202ENST00000568095 MUC12Q9UKN1 5478 aa1.81□□□□□ -2.12
LINC01541-202ENST00000568095 KRTAP5-2Q701N4 177 aa1.81□□□□□ -2.12
LINC01541-202ENST00000568095 MT1LQ93083 61 aa1.8□□□□□ -2.12
LINC01541-202ENST00000568095 OBSCNQ5VST9 7968 aa1.8□□□□□ -2.12
LINC01541-202ENST00000568095 AHNAKQ09666 5890 aaKnown RBP1.79□□□□□ -2.12
LINC01541-202ENST00000568095 SYNE2Q8WXH0 6885 aaKnown RBP1.79□□□□□ -2.12
LINC01541-202ENST00000568095 MDN1Q9NU22 5596 aa1.78□□□□□ -2.13
LINC01541-202ENST00000568095 KRTAP19-3Q7Z4W3 81 aa1.75□□□□□ -2.13
LINC01541-202ENST00000568095 SPRR2FQ96RM1 72 aa1.73□□□□□ -2.13
LINC01541-202ENST00000568095 KRTAP12-4P60329 112 aa1.73□□□□□ -2.13
LINC01541-202ENST00000568095 MT1MQ8N339 61 aa1.73□□□□□ -2.13
LINC01541-202ENST00000568095 KRTAP5-8O75690 187 aa1.72□□□□□ -2.13
LINC01541-202ENST00000568095 MT1GP13640 62 aa1.71□□□□□ -2.14
LINC01541-202ENST00000568095 KRTAP5-5Q701N2 237 aaPredicted RBP1.71□□□□□ -2.14
LINC01541-202ENST00000568095 KRTAP5-10Q6L8G5 202 aa1.69□□□□□ -2.14
LINC01541-202ENST00000568095 LCE3DQ9BYE3 92 aa1.69□□□□□ -2.14
LINC01541-202ENST00000568095 KRTAP4-3Q9BYR4 195 aa1.68□□□□□ -2.14
LINC01541-202ENST00000568095 MT1AP04731 61 aa1.65□□□□□ -2.15
LINC01541-202ENST00000568095 SPRR2EP22531 72 aa1.65□□□□□ -2.15
LINC01541-202ENST00000568095 SPRR2BP35325 72 aa1.65□□□□□ -2.15
LINC01541-202ENST00000568095 SPRR2AP35326 72 aa1.65□□□□□ -2.15
LINC01541-202ENST00000568095 MUC19Q7Z5P9 8384 aa1.6□□□□□ -2.15
LINC01541-202ENST00000568095 SPRR2DP22532 72 aa1.59□□□□□ -2.16
LINC01541-202ENST00000568095 AHNAK2Q8IVF2 5795 aa1.58□□□□□ -2.16
LINC01541-202ENST00000568095 SYNE1Q8NF91 8797 aaKnown RBP1.58□□□□□ -2.16
LINC01541-202ENST00000568095 DSTQ03001 7570 aaKnown RBP1.56□□□□□ -2.16
LINC01541-202ENST00000568095 PRM1P04553 51 aa1.55□□□□□ -2.16
LINC01541-202ENST00000568095 KRTAP6-1Q3LI64 71 aa1.52□□□□□ -2.17
LINC01541-202ENST00000568095 KRTAP6-2Q3LI66 62 aa1.46□□□□□ -2.17
LINC01541-202ENST00000568095 KRTAP20-2Q3LI61 65 aa1.4□□□□□ -2.19
LINC01541-202ENST00000568095 MUC5ACP98088 5654 aa1.38□□□□□ -2.19
LINC01541-202ENST00000568095 MT4P47944 62 aa1.36□□□□□ -2.19
LINC01541-202ENST00000568095 LCE1CQ5T751 118 aa1.3□□□□□ -2.2
LINC01541-202ENST00000568095 LCE1BQ5T7P3 118 aa1.3□□□□□ -2.2
LINC01541-202ENST00000568095 KRTAP21-1Q3LI58 79 aa1.06□□□□□ -2.24
LINC01541-202ENST00000568095 KRTAP21-2Q3LI59 83 aa1.03□□□□□ -2.24
LINC01541-202ENST00000568095 PHGR1C9JFL3 82 aa0.93□□□□□ -2.26
LINC01541-202ENST00000568095 MUC16Q8WXI7 14507 aa0.66□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 101.5 ms