RNA–Protein interactions for RNA: ENST00000567869.1

HERC2-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 2

Gene HERC2, Length 3,523 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-209ENST00000567869 KRTAP19-6Q3LI70 58 aa2.96□□□□□ -1.94
HERC2-209ENST00000567869 KRTAP19-7Q3SYF9 63 aa2.96□□□□□ -1.94
HERC2-209ENST00000567869 KRTAP9-2Q9BYQ4 174 aa2.96□□□□□ -1.94
HERC2-209ENST00000567869 KRTAP9-6A0A140TA67 174 aa2.96□□□□□ -1.94
HERC2-209ENST00000567869 KRTAP2-2Q9BYT5 123 aa2.94□□□□□ -1.94
HERC2-209ENST00000567869 FCGBPQ9Y6R7 5405 aaPredicted RBP2.91□□□□□ -1.94
HERC2-209ENST00000567869 KRTAP12-4P60329 112 aa2.9□□□□□ -1.95
HERC2-209ENST00000567869 KRTAP6-3Q3LI67 103 aa2.89□□□□□ -1.95
HERC2-209ENST00000567869 MT1EP04732 61 aa2.88□□□□□ -1.95
HERC2-209ENST00000567869 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.88□□□□□ -1.95
HERC2-209ENST00000567869 MUC12Q9UKN1 5478 aa2.86□□□□□ -1.95
HERC2-209ENST00000567869 MT1LQ93083 61 aa2.86□□□□□ -1.95
HERC2-209ENST00000567869 KRTAP4-3Q9BYR4 195 aa2.83□□□□□ -1.96
HERC2-209ENST00000567869 KRTAP19-4Q3LI73 84 aa2.82□□□□□ -1.96
HERC2-209ENST00000567869 MT1GP13640 62 aa2.81□□□□□ -1.96
HERC2-209ENST00000567869 SPRR2FQ96RM1 72 aa2.8□□□□□ -1.96
HERC2-209ENST00000567869 DSTQ03001 7570 aaKnown RBP2.79□□□□□ -1.96
HERC2-209ENST00000567869 LCE1AQ5T7P2 110 aa2.79□□□□□ -1.96
HERC2-209ENST00000567869 MACF1Q9UPN3 7388 aaKnown RBP2.78□□□□□ -1.96
HERC2-209ENST00000567869 KRTAP4-12Q9BQ66 201 aa2.77□□□□□ -1.97
HERC2-209ENST00000567869 SYNE1Q8NF91 8797 aaKnown RBP2.77□□□□□ -1.97
HERC2-209ENST00000567869 KRTAP4-9Q9BYQ8 210 aa2.75□□□□□ -1.97
HERC2-209ENST00000567869 KRTAP9-9Q9BYP9 154 aa2.74□□□□□ -1.97
HERC2-209ENST00000567869 KRTAP9-4Q9BYQ2 154 aa2.74□□□□□ -1.97
HERC2-209ENST00000567869 KRTAP5-5Q701N2 237 aaPredicted RBP2.74□□□□□ -1.97
HERC2-209ENST00000567869 LCE3BQ5TA77 95 aa2.73□□□□□ -1.97
HERC2-209ENST00000567869 KRTAP19-3Q7Z4W3 81 aa2.73□□□□□ -1.97
HERC2-209ENST00000567869 SYNE2Q8WXH0 6885 aaKnown RBP2.72□□□□□ -1.97
HERC2-209ENST00000567869 MT1MQ8N339 61 aa2.71□□□□□ -1.98
HERC2-209ENST00000567869 OBSCNQ5VST9 7968 aa2.69□□□□□ -1.98
HERC2-209ENST00000567869 KRTAP9-7A8MTY7 169 aa2.68□□□□□ -1.98
HERC2-209ENST00000567869 PRM1P04553 51 aa2.64□□□□□ -1.99
HERC2-209ENST00000567869 LCE5AQ5TCM9 118 aa2.64□□□□□ -1.99
HERC2-209ENST00000567869 MDN1Q9NU22 5596 aa2.63□□□□□ -1.99
HERC2-209ENST00000567869 MT1AP04731 61 aa2.62□□□□□ -1.99
HERC2-209ENST00000567869 LCE1DQ5T752 114 aa2.6□□□□□ -1.99
HERC2-209ENST00000567869 LCE1EQ5T753 118 aa2.59□□□□□ -2
HERC2-209ENST00000567869 SPRR2EP22531 72 aa2.56□□□□□ -2
HERC2-209ENST00000567869 SPRR2BP35325 72 aa2.56□□□□□ -2
HERC2-209ENST00000567869 SPRR2AP35326 72 aa2.56□□□□□ -2
HERC2-209ENST00000567869 KRTAP4-2Q9BYR5 136 aa2.55□□□□□ -2
HERC2-209ENST00000567869 LCE3DQ9BYE3 92 aa2.54□□□□□ -2
HERC2-209ENST00000567869 KRTAP5-9P26371 169 aa2.54□□□□□ -2
HERC2-209ENST00000567869 LCE3EQ5T5B0 92 aa2.51□□□□□ -2.01
HERC2-209ENST00000567869 KRTAP6-1Q3LI64 71 aa2.45□□□□□ -2.02
HERC2-209ENST00000567869 SPRR2DP22532 72 aa2.45□□□□□ -2.02
HERC2-209ENST00000567869 LCE4AQ5TA78 99 aa2.45□□□□□ -2.02
HERC2-209ENST00000567869 KRTAP4-11Q9BYQ6 195 aa2.44□□□□□ -2.02
HERC2-209ENST00000567869 KRTAP6-2Q3LI66 62 aa2.43□□□□□ -2.02
HERC2-209ENST00000567869 GPR98Q8WXG9 6306 aa2.43□□□□□ -2.02
HERC2-209ENST00000567869 KRTAP5-3Q6L8H2 238 aa2.4□□□□□ -2.02
HERC2-209ENST00000567869 NEBP20929 6669 aa2.32□□□□□ -2.04
HERC2-209ENST00000567869 LCE1FQ5T754 118 aa2.31□□□□□ -2.04
HERC2-209ENST00000567869 KRTAP20-1Q3LI63 56 aa2.3□□□□□ -2.04
HERC2-209ENST00000567869 MUC5BQ9HC84 5762 aaPredicted RBP2.28□□□□□ -2.05
HERC2-209ENST00000567869 MT4P47944 62 aa2.25□□□□□ -2.05
HERC2-209ENST00000567869 MT3P25713 68 aa2.21□□□□□ -2.06
HERC2-209ENST00000567869 KRTAP5-4Q6L8H1 288 aa2.15□□□□□ -2.06
HERC2-209ENST00000567869 AHNAKQ09666 5890 aaKnown RBP2.11□□□□□ -2.07
HERC2-209ENST00000567869 KRTAP20-2Q3LI61 65 aa2.06□□□□□ -2.08
HERC2-209ENST00000567869 HMCN1Q96RW7 5635 aa2.05□□□□□ -2.08
HERC2-209ENST00000567869 KRTAP5-7Q6L8G8 165 aa2.02□□□□□ -2.09
HERC2-209ENST00000567869 LCE1BQ5T7P3 118 aa1.98□□□□□ -2.09
HERC2-209ENST00000567869 KRTAP5-2Q701N4 177 aa1.98□□□□□ -2.09
HERC2-209ENST00000567869 MUC19Q7Z5P9 8384 aa1.95□□□□□ -2.1
HERC2-209ENST00000567869 KRTAP5-10Q6L8G5 202 aa1.89□□□□□ -2.11
HERC2-209ENST00000567869 MUC5ACP98088 5654 aa1.87□□□□□ -2.11
HERC2-209ENST00000567869 KRTAP21-1Q3LI58 79 aa1.84□□□□□ -2.11
HERC2-209ENST00000567869 AHNAK2Q8IVF2 5795 aa1.82□□□□□ -2.12
HERC2-209ENST00000567869 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.82□□□□□ -2.12
HERC2-209ENST00000567869 KRTAP5-1Q6L8H4 278 aa1.81□□□□□ -2.12
HERC2-209ENST00000567869 LCE1CQ5T751 118 aa1.74□□□□□ -2.13
HERC2-209ENST00000567869 KRTAP5-8O75690 187 aa1.66□□□□□ -2.14
HERC2-209ENST00000567869 KRTAP4-4Q9BYR3 166 aa1.64□□□□□ -2.15
HERC2-209ENST00000567869 KRTAP5-11Q6L8G4 156 aa1.64□□□□□ -2.15
HERC2-209ENST00000567869 KRTAP21-2Q3LI59 83 aa1.56□□□□□ -2.16
HERC2-209ENST00000567869 PHGR1C9JFL3 82 aa1.26□□□□□ -2.21
HERC2-209ENST00000567869 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 61.1 ms