RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 KMT2DO14686 5537 aa5.41□□□□□ -1.54
COMMD4-215ENST00000566843 KRTAP4-7Q9BYR0 210 aa5.39□□□□□ -1.55
COMMD4-215ENST00000566843 CRCT1Q9UGL9 99 aa5.39□□□□□ -1.55
COMMD4-215ENST00000566843 MT1LQ93083 61 aa5.33□□□□□ -1.56
COMMD4-215ENST00000566843 MT1EP04732 61 aa5.28□□□□□ -1.56
COMMD4-215ENST00000566843 MACF1Q9UPN3 7388 aaKnown RBP5.17□□□□□ -1.58
COMMD4-215ENST00000566843 KRTAP9-6A0A140TA67 174 aa5.17□□□□□ -1.58
COMMD4-215ENST00000566843 SYNE2Q8WXH0 6885 aaKnown RBP5.07□□□□□ -1.6
COMMD4-215ENST00000566843 LOC100996750A0A140TA64 210 aa5.01□□□□□ -1.61
COMMD4-215ENST00000566843 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.99□□□□□ -1.61
COMMD4-215ENST00000566843 MUC12Q9UKN1 5478 aa4.98□□□□□ -1.61
COMMD4-215ENST00000566843 SPRR2FQ96RM1 72 aa4.97□□□□□ -1.61
COMMD4-215ENST00000566843 KRTAP4-3Q9BYR4 195 aa4.97□□□□□ -1.61
COMMD4-215ENST00000566843 MT1GP13640 62 aa4.95□□□□□ -1.62
COMMD4-215ENST00000566843 KRTAP12-4P60329 112 aa4.93□□□□□ -1.62
COMMD4-215ENST00000566843 MT1MQ8N339 61 aa4.92□□□□□ -1.62
COMMD4-215ENST00000566843 KRTAP5-9P26371 169 aa4.86□□□□□ -1.63
COMMD4-215ENST00000566843 KRTAP19-3Q7Z4W3 81 aa4.86□□□□□ -1.63
COMMD4-215ENST00000566843 MDN1Q9NU22 5596 aa4.83□□□□□ -1.64
COMMD4-215ENST00000566843 KRTAP6-3Q3LI67 103 aa4.8□□□□□ -1.64
COMMD4-215ENST00000566843 KRTAP9-7A8MTY7 169 aa4.74□□□□□ -1.65
COMMD4-215ENST00000566843 LCE1AQ5T7P2 110 aa4.74□□□□□ -1.65
COMMD4-215ENST00000566843 SPRR2EP22531 72 aa4.72□□□□□ -1.65
COMMD4-215ENST00000566843 SPRR2BP35325 72 aa4.72□□□□□ -1.65
COMMD4-215ENST00000566843 SPRR2AP35326 72 aa4.72□□□□□ -1.65
COMMD4-215ENST00000566843 LCE5AQ5TCM9 118 aa4.72□□□□□ -1.65
COMMD4-215ENST00000566843 MT1AP04731 61 aa4.67□□□□□ -1.66
COMMD4-215ENST00000566843 LCE3BQ5TA77 95 aa4.63□□□□□ -1.67
COMMD4-215ENST00000566843 DSTQ03001 7570 aaKnown RBP4.61□□□□□ -1.67
COMMD4-215ENST00000566843 KRTAP4-9Q9BYQ8 210 aa4.59□□□□□ -1.67
COMMD4-215ENST00000566843 SPRR2DP22532 72 aa4.54□□□□□ -1.68
COMMD4-215ENST00000566843 NEBP20929 6669 aa4.51□□□□□ -1.69
COMMD4-215ENST00000566843 KRTAP6-1Q3LI64 71 aa4.51□□□□□ -1.69
COMMD4-215ENST00000566843 LCE3DQ9BYE3 92 aa4.49□□□□□ -1.69
COMMD4-215ENST00000566843 LCE3EQ5T5B0 92 aa4.48□□□□□ -1.69
COMMD4-215ENST00000566843 KRTAP5-5Q701N2 237 aaPredicted RBP4.47□□□□□ -1.69
COMMD4-215ENST00000566843 SYNE1Q8NF91 8797 aaKnown RBP4.43□□□□□ -1.7
COMMD4-215ENST00000566843 PRM1P04553 51 aa4.39□□□□□ -1.71
COMMD4-215ENST00000566843 KRTAP2-2Q9BYT5 123 aa4.37□□□□□ -1.71
COMMD4-215ENST00000566843 KRTAP6-2Q3LI66 62 aa4.2□□□□□ -1.74
COMMD4-215ENST00000566843 KRTAP9-4Q9BYQ2 154 aa4.19□□□□□ -1.74
COMMD4-215ENST00000566843 KRTAP20-1Q3LI63 56 aa4.18□□□□□ -1.74
COMMD4-215ENST00000566843 KRTAP5-4Q6L8H1 288 aa4.04□□□□□ -1.76
COMMD4-215ENST00000566843 MT3P25713 68 aa3.99□□□□□ -1.77
COMMD4-215ENST00000566843 MT4P47944 62 aa3.99□□□□□ -1.77
COMMD4-215ENST00000566843 LCE4AQ5TA78 99 aa3.96□□□□□ -1.78
COMMD4-215ENST00000566843 KRTAP4-6Q9BYQ5 205 aa3.95□□□□□ -1.78
COMMD4-215ENST00000566843 LCE1DQ5T752 114 aa3.9□□□□□ -1.79
COMMD4-215ENST00000566843 LCE1EQ5T753 118 aa3.89□□□□□ -1.79
COMMD4-215ENST00000566843 HMCN1Q96RW7 5635 aa3.86□□□□□ -1.79
COMMD4-215ENST00000566843 KRTAP20-2Q3LI61 65 aa3.82□□□□□ -1.8
COMMD4-215ENST00000566843 LCE1FQ5T754 118 aa3.74□□□□□ -1.81
COMMD4-215ENST00000566843 OBSCNQ5VST9 7968 aa3.7□□□□□ -1.82
COMMD4-215ENST00000566843 KRTAP5-3Q6L8H2 238 aa3.67□□□□□ -1.82
COMMD4-215ENST00000566843 KRTAP5-2Q701N4 177 aa3.65□□□□□ -1.82
COMMD4-215ENST00000566843 AHNAK2Q8IVF2 5795 aa3.4□□□□□ -1.86
COMMD4-215ENST00000566843 MUC5ACP98088 5654 aa3.35□□□□□ -1.87
COMMD4-215ENST00000566843 KRTAP4-11Q9BYQ6 195 aa3.33□□□□□ -1.88
COMMD4-215ENST00000566843 KRTAP5-10Q6L8G5 202 aa3.28□□□□□ -1.88
COMMD4-215ENST00000566843 KRTAP5-1Q6L8H4 278 aa3.22□□□□□ -1.89
COMMD4-215ENST00000566843 KRTAP9-9Q9BYP9 154 aa3.21□□□□□ -1.9
COMMD4-215ENST00000566843 KRTAP5-8O75690 187 aa3.2□□□□□ -1.9
COMMD4-215ENST00000566843 LCE1BQ5T7P3 118 aa3.13□□□□□ -1.91
COMMD4-215ENST00000566843 GPR98Q8WXG9 6306 aa3.1□□□□□ -1.91
COMMD4-215ENST00000566843 KRTAP4-2Q9BYR5 136 aa3.06□□□□□ -1.92
COMMD4-215ENST00000566843 LCE1CQ5T751 118 aa3.03□□□□□ -1.92
COMMD4-215ENST00000566843 KRTAP5-7Q6L8G8 165 aa3.03□□□□□ -1.92
COMMD4-215ENST00000566843 KRTAP21-2Q3LI59 83 aa2.92□□□□□ -1.94
COMMD4-215ENST00000566843 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.91□□□□□ -1.94
COMMD4-215ENST00000566843 KRTAP21-1Q3LI58 79 aa2.85□□□□□ -1.95
COMMD4-215ENST00000566843 MUC5BQ9HC84 5762 aaPredicted RBP2.82□□□□□ -1.96
COMMD4-215ENST00000566843 KRTAP5-11Q6L8G4 156 aa2.66□□□□□ -1.98
COMMD4-215ENST00000566843 KRTAP4-12Q9BQ66 201 aa2.63□□□□□ -1.99
COMMD4-215ENST00000566843 KRTAP4-4Q9BYR3 166 aa2.6□□□□□ -1.99
COMMD4-215ENST00000566843 MUC19Q7Z5P9 8384 aa2.58□□□□□ -2
COMMD4-215ENST00000566843 AHNAKQ09666 5890 aaKnown RBP2.55□□□□□ -2
COMMD4-215ENST00000566843 PHGR1C9JFL3 82 aa2.3□□□□□ -2.04
COMMD4-215ENST00000566843 MUC16Q8WXI7 14507 aa1.54□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 12.7 ms