RNA–Protein interactions for RNA: ENST00000566583.5

SNHG20-204, Transcript of small nucleolar RNA host gene 20, humanhuman

TSL 1 (best) BASIC

Gene SNHG20, Length 1,338 nt, Biotype sense overlapping, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG20-204ENST00000566583 SPRR2AP35326 72 aa5.59□□□□□ -1.51
SNHG20-204ENST00000566583 MUC12Q9UKN1 5478 aa5.58□□□□□ -1.52
SNHG20-204ENST00000566583 LOC100996750A0A140TA64 210 aa5.55□□□□□ -1.52
SNHG20-204ENST00000566583 KRTAP19-3Q7Z4W3 81 aa5.55□□□□□ -1.52
SNHG20-204ENST00000566583 MT1LQ93083 61 aa5.55□□□□□ -1.52
SNHG20-204ENST00000566583 KRTAP4-6Q9BYQ5 205 aa5.55□□□□□ -1.52
SNHG20-204ENST00000566583 LCE5AQ5TCM9 118 aa5.52□□□□□ -1.53
SNHG20-204ENST00000566583 MT1GP13640 62 aa5.48□□□□□ -1.53
SNHG20-204ENST00000566583 PRAC1Q96KF2 57 aa5.46□□□□□ -1.54
SNHG20-204ENST00000566583 MDN1Q9NU22 5596 aa5.45□□□□□ -1.54
SNHG20-204ENST00000566583 KRTAP15-1Q3LI76 137 aa5.45□□□□□ -1.54
SNHG20-204ENST00000566583 KTN1-AS1Q86SY8 53 aa5.42□□□□□ -1.54
SNHG20-204ENST00000566583 NEBP20929 6669 aa5.41□□□□□ -1.54
SNHG20-204ENST00000566583 MT1MQ8N339 61 aa5.41□□□□□ -1.54
SNHG20-204ENST00000566583 SPRR2DP22532 72 aa5.4□□□□□ -1.55
SNHG20-204ENST00000566583 KRTAP19-4Q3LI73 84 aa5.37□□□□□ -1.55
SNHG20-204ENST00000566583 KRTAP4-7Q9BYR0 210 aa5.3□□□□□ -1.56
SNHG20-204ENST00000566583 KRTAP2-3P0C7H8 128 aa5.26□□□□□ -1.57
SNHG20-204ENST00000566583 KRTAP4-3Q9BYR4 195 aa5.26□□□□□ -1.57
SNHG20-204ENST00000566583 KRTAP2-4Q9BYR9 128 aa5.26□□□□□ -1.57
SNHG20-204ENST00000566583 KRTAP20-1Q3LI63 56 aa5.25□□□□□ -1.57
SNHG20-204ENST00000566583 LCE3CQ5T5A8 94 aa5.25□□□□□ -1.57
SNHG20-204ENST00000566583 LCE3BQ5TA77 95 aa5.23□□□□□ -1.57
SNHG20-204ENST00000566583 KRTAP2-2Q9BYT5 123 aa5.13□□□□□ -1.59
SNHG20-204ENST00000566583 KRTAP2-1Q9BYU5 128 aa5.13□□□□□ -1.59
SNHG20-204ENST00000566583 DSTQ03001 7570 aaKnown RBP5.03□□□□□ -1.6
SNHG20-204ENST00000566583 KRTAP9-6A8MVA2 160 aa5□□□□□ -1.61
SNHG20-204ENST00000566583 KRTAP5-5Q701N2 237 aaPredicted RBP4.96□□□□□ -1.62
SNHG20-204ENST00000566583 SPRR5A0A1B0GTR4 108 aa4.95□□□□□ -1.62
SNHG20-204ENST00000566583 KRTAP5-4Q6L8H1 288 aa4.91□□□□□ -1.62
SNHG20-204ENST00000566583 LCE4AQ5TA78 99 aa4.84□□□□□ -1.63
SNHG20-204ENST00000566583 KRTAP4-12Q9BQ66 201 aa4.83□□□□□ -1.64
SNHG20-204ENST00000566583 MT1AP04731 61 aa4.72□□□□□ -1.65
SNHG20-204ENST00000566583 KRTAP4-9Q9BYQ8 210 aa4.72□□□□□ -1.65
SNHG20-204ENST00000566583 LCE1DQ5T752 114 aa4.71□□□□□ -1.66
SNHG20-204ENST00000566583 KRTAP9-9Q9BYP9 154 aa4.69□□□□□ -1.66
SNHG20-204ENST00000566583 KRTAP9-4Q9BYQ2 154 aa4.69□□□□□ -1.66
SNHG20-204ENST00000566583 MT4P47944 62 aa4.68□□□□□ -1.66
SNHG20-204ENST00000566583 KRTAP6-1Q3LI64 71 aa4.68□□□□□ -1.66
SNHG20-204ENST00000566583 KRTAP12-4P60329 112 aa4.59□□□□□ -1.67
SNHG20-204ENST00000566583 KRTAP20-2Q3LI61 65 aa4.55□□□□□ -1.68
SNHG20-204ENST00000566583 SYNE1Q8NF91 8797 aaKnown RBP4.51□□□□□ -1.69
SNHG20-204ENST00000566583 HMCN1Q96RW7 5635 aa4.48□□□□□ -1.69
SNHG20-204ENST00000566583 KRTAP5-3Q6L8H2 238 aa4.45□□□□□ -1.7
SNHG20-204ENST00000566583 LUZP6Q538Z0 58 aa4.43□□□□□ -1.7
SNHG20-204ENST00000566583 KRTAP5-2Q701N4 177 aa4.39□□□□□ -1.71
SNHG20-204ENST00000566583 KRTAP6-2Q3LI66 62 aa4.34□□□□□ -1.71
SNHG20-204ENST00000566583 KRTAP4-2Q9BYR5 136 aa4.29□□□□□ -1.72
SNHG20-204ENST00000566583 MT3P25713 68 aa4.27□□□□□ -1.73
SNHG20-204ENST00000566583 KRTAP4-11Q9BYQ6 195 aa4.24□□□□□ -1.73
SNHG20-204ENST00000566583 KRTAP5-10Q6L8G5 202 aa4.14□□□□□ -1.75
SNHG20-204ENST00000566583 AHNAK2Q8IVF2 5795 aa4.13□□□□□ -1.75
SNHG20-204ENST00000566583 NDUFAF8A1L188 74 aa4.1□□□□□ -1.75
SNHG20-204ENST00000566583 GPR98Q8WXG9 6306 aa3.91□□□□□ -1.78
SNHG20-204ENST00000566583 KRTAP5-8O75690 187 aa3.91□□□□□ -1.78
SNHG20-204ENST00000566583 KRTAP5-7Q6L8G8 165 aa3.91□□□□□ -1.78
SNHG20-204ENST00000566583 LCE3DQ9BYE3 92 aa3.87□□□□□ -1.79
SNHG20-204ENST00000566583 KRTAP5-1Q6L8H4 278 aa3.84□□□□□ -1.79
SNHG20-204ENST00000566583 LCE1EQ5T753 118 aa3.83□□□□□ -1.8
SNHG20-204ENST00000566583 OBSCNQ5VST9 7968 aa3.83□□□□□ -1.8
SNHG20-204ENST00000566583 LCE3EQ5T5B0 92 aa3.73□□□□□ -1.81
SNHG20-204ENST00000566583 MUC5ACP98088 5654 aa3.57□□□□□ -1.84
SNHG20-204ENST00000566583 LCE1CQ5T751 118 aa3.55□□□□□ -1.84
SNHG20-204ENST00000566583 LCE1BQ5T7P3 118 aa3.55□□□□□ -1.84
SNHG20-204ENST00000566583 INE1O15225 51 aa3.39□□□□□ -1.87
SNHG20-204ENST00000566583 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.33□□□□□ -1.88
SNHG20-204ENST00000566583 MUC5BQ9HC84 5762 aaPredicted RBP3.29□□□□□ -1.88
SNHG20-204ENST00000566583 KRTAP5-11Q6L8G4 156 aa3.19□□□□□ -1.9
SNHG20-204ENST00000566583 AHNAKQ09666 5890 aaKnown RBP3.18□□□□□ -1.9
SNHG20-204ENST00000566583 LCE1FQ5T754 118 aa3.18□□□□□ -1.9
SNHG20-204ENST00000566583 KRTAP21-2Q3LI59 83 aa3.1□□□□□ -1.91
SNHG20-204ENST00000566583 PRM1P04553 51 aa3.07□□□□□ -1.92
SNHG20-204ENST00000566583 PHGR1C9JFL3 82 aa2.73□□□□□ -1.97
SNHG20-204ENST00000566583 KRTAP4-4Q9BYR3 166 aa2.71□□□□□ -1.98
SNHG20-204ENST00000566583 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
SNHG20-204ENST00000566583 KRTAP21-1Q3LI58 79 aa1.86□□□□□ -2.11
SNHG20-204ENST00000566583 MUC16Q8WXI7 14507 aa1.69□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 81 ms