RNA–Protein interactions for RNA: ENST00000565504.5

TRAPPC2L-211, Transcript of trafficking protein particle complex 2 like, humanhuman

TSL 2 BASIC

Gene TRAPPC2L, Length 3,102 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2L-211ENST00000565504 LOC100996750A0A140TA64 210 aa4.17□□□□□ -1.74
TRAPPC2L-211ENST00000565504 KRTAP4-3Q9BYR4 195 aa4.16□□□□□ -1.74
TRAPPC2L-211ENST00000565504 MT1GP13640 62 aa4.15□□□□□ -1.75
TRAPPC2L-211ENST00000565504 KRTAP19-6Q3LI70 58 aa4.13□□□□□ -1.75
TRAPPC2L-211ENST00000565504 CRCT1Q9UGL9 99 aa4.1□□□□□ -1.75
TRAPPC2L-211ENST00000565504 MT1MQ8N339 61 aa4.07□□□□□ -1.76
TRAPPC2L-211ENST00000565504 KRTAP19-3Q7Z4W3 81 aa4.06□□□□□ -1.76
TRAPPC2L-211ENST00000565504 FCGBPQ9Y6R7 5405 aaPredicted RBP4.04□□□□□ -1.76
TRAPPC2L-211ENST00000565504 MUC12Q9UKN1 5478 aa4.04□□□□□ -1.76
TRAPPC2L-211ENST00000565504 KRTAP12-4P60329 112 aa4.03□□□□□ -1.76
TRAPPC2L-211ENST00000565504 DSTQ03001 7570 aaKnown RBP4.02□□□□□ -1.77
TRAPPC2L-211ENST00000565504 OBSCNQ5VST9 7968 aa4.02□□□□□ -1.77
TRAPPC2L-211ENST00000565504 LCE5AQ5TCM9 118 aa3.97□□□□□ -1.77
TRAPPC2L-211ENST00000565504 KRTAP9-2Q9BYQ4 174 aa3.95□□□□□ -1.78
TRAPPC2L-211ENST00000565504 LCE1FQ5T754 118 aa3.92□□□□□ -1.78
TRAPPC2L-211ENST00000565504 MACF1Q9UPN3 7388 aaKnown RBP3.89□□□□□ -1.79
TRAPPC2L-211ENST00000565504 LCE3BQ5TA77 95 aa3.88□□□□□ -1.79
TRAPPC2L-211ENST00000565504 SPRR2FQ96RM1 72 aa3.88□□□□□ -1.79
TRAPPC2L-211ENST00000565504 KRTAP9-4Q9BYQ2 154 aa3.86□□□□□ -1.79
TRAPPC2L-211ENST00000565504 SYNE1Q8NF91 8797 aaKnown RBP3.83□□□□□ -1.8
TRAPPC2L-211ENST00000565504 SYNE2Q8WXH0 6885 aaKnown RBP3.82□□□□□ -1.8
TRAPPC2L-211ENST00000565504 LCE4AQ5TA78 99 aa3.81□□□□□ -1.8
TRAPPC2L-211ENST00000565504 LCE1EQ5T753 118 aa3.81□□□□□ -1.8
TRAPPC2L-211ENST00000565504 KRTAP4-9Q9BYQ8 210 aa3.81□□□□□ -1.8
TRAPPC2L-211ENST00000565504 MT1AP04731 61 aa3.76□□□□□ -1.81
TRAPPC2L-211ENST00000565504 KRTAP2-2Q9BYT5 123 aa3.74□□□□□ -1.81
TRAPPC2L-211ENST00000565504 KRTAP6-1Q3LI64 71 aa3.73□□□□□ -1.81
TRAPPC2L-211ENST00000565504 KRTAP9-9Q9BYP9 154 aa3.72□□□□□ -1.81
TRAPPC2L-211ENST00000565504 LCE3DQ9BYE3 92 aa3.71□□□□□ -1.82
TRAPPC2L-211ENST00000565504 LCE3EQ5T5B0 92 aa3.67□□□□□ -1.82
TRAPPC2L-211ENST00000565504 MDN1Q9NU22 5596 aa3.67□□□□□ -1.82
TRAPPC2L-211ENST00000565504 LCE1AQ5T7P2 110 aa3.66□□□□□ -1.82
TRAPPC2L-211ENST00000565504 KRTAP9-6A0A140TA67 174 aa3.61□□□□□ -1.83
TRAPPC2L-211ENST00000565504 KRTAP9-7A8MTY7 169 aa3.61□□□□□ -1.83
TRAPPC2L-211ENST00000565504 PRM1P04553 51 aa3.57□□□□□ -1.84
TRAPPC2L-211ENST00000565504 KRTAP5-5Q701N2 237 aaPredicted RBP3.57□□□□□ -1.84
TRAPPC2L-211ENST00000565504 LCE1DQ5T752 114 aa3.56□□□□□ -1.84
TRAPPC2L-211ENST00000565504 KRTAP5-9P26371 169 aa3.55□□□□□ -1.84
TRAPPC2L-211ENST00000565504 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.53□□□□□ -1.84
TRAPPC2L-211ENST00000565504 SPRR2EP22531 72 aa3.49□□□□□ -1.85
TRAPPC2L-211ENST00000565504 SPRR2BP35325 72 aa3.49□□□□□ -1.85
TRAPPC2L-211ENST00000565504 SPRR2AP35326 72 aa3.49□□□□□ -1.85
TRAPPC2L-211ENST00000565504 KRTAP6-3Q3LI67 103 aa3.43□□□□□ -1.86
TRAPPC2L-211ENST00000565504 KRTAP6-2Q3LI66 62 aa3.42□□□□□ -1.86
TRAPPC2L-211ENST00000565504 MUC19Q7Z5P9 8384 aa3.36□□□□□ -1.87
TRAPPC2L-211ENST00000565504 SPRR2DP22532 72 aa3.34□□□□□ -1.87
TRAPPC2L-211ENST00000565504 MT3P25713 68 aa3.33□□□□□ -1.88
TRAPPC2L-211ENST00000565504 NEBP20929 6669 aa3.29□□□□□ -1.88
TRAPPC2L-211ENST00000565504 KRTAP5-4Q6L8H1 288 aa3.02□□□□□ -1.93
TRAPPC2L-211ENST00000565504 MT4P47944 62 aa2.97□□□□□ -1.93
TRAPPC2L-211ENST00000565504 KRTAP4-6Q9BYQ5 205 aa2.96□□□□□ -1.94
TRAPPC2L-211ENST00000565504 KRTAP20-1Q3LI63 56 aa2.9□□□□□ -1.95
TRAPPC2L-211ENST00000565504 HMCN1Q96RW7 5635 aa2.88□□□□□ -1.95
TRAPPC2L-211ENST00000565504 KRTAP20-2Q3LI61 65 aa2.88□□□□□ -1.95
TRAPPC2L-211ENST00000565504 KRTAP5-2Q701N4 177 aa2.85□□□□□ -1.95
TRAPPC2L-211ENST00000565504 MUC5ACP98088 5654 aa2.8□□□□□ -1.96
TRAPPC2L-211ENST00000565504 KRTAP5-3Q6L8H2 238 aa2.71□□□□□ -1.98
TRAPPC2L-211ENST00000565504 LCE1BQ5T7P3 118 aa2.7□□□□□ -1.98
TRAPPC2L-211ENST00000565504 KRTAP4-11Q9BYQ6 195 aa2.68□□□□□ -1.98
TRAPPC2L-211ENST00000565504 GPR98Q8WXG9 6306 aa2.66□□□□□ -1.98
TRAPPC2L-211ENST00000565504 KRTAP5-10Q6L8G5 202 aa2.65□□□□□ -1.98
TRAPPC2L-211ENST00000565504 KRTAP4-12Q9BQ66 201 aa2.6□□□□□ -1.99
TRAPPC2L-211ENST00000565504 KRTAP5-1Q6L8H4 278 aa2.57□□□□□ -2
TRAPPC2L-211ENST00000565504 MUC5BQ9HC84 5762 aaPredicted RBP2.55□□□□□ -2
TRAPPC2L-211ENST00000565504 LCE1CQ5T751 118 aa2.5□□□□□ -2.01
TRAPPC2L-211ENST00000565504 KRTAP4-2Q9BYR5 136 aa2.5□□□□□ -2.01
TRAPPC2L-211ENST00000565504 AHNAK2Q8IVF2 5795 aa2.46□□□□□ -2.02
TRAPPC2L-211ENST00000565504 KRTAP5-7Q6L8G8 165 aa2.42□□□□□ -2.02
TRAPPC2L-211ENST00000565504 AHNAKQ09666 5890 aaKnown RBP2.41□□□□□ -2.02
TRAPPC2L-211ENST00000565504 KRTAP21-2Q3LI59 83 aa2.38□□□□□ -2.03
TRAPPC2L-211ENST00000565504 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.35□□□□□ -2.03
TRAPPC2L-211ENST00000565504 KRTAP5-8O75690 187 aa2.33□□□□□ -2.04
TRAPPC2L-211ENST00000565504 KRTAP4-4Q9BYR3 166 aa2.23□□□□□ -2.05
TRAPPC2L-211ENST00000565504 KRTAP21-1Q3LI58 79 aa2.23□□□□□ -2.05
TRAPPC2L-211ENST00000565504 KRTAP5-11Q6L8G4 156 aa2.12□□□□□ -2.07
TRAPPC2L-211ENST00000565504 PHGR1C9JFL3 82 aa1.84□□□□□ -2.12
TRAPPC2L-211ENST00000565504 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 6.2 ms