RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 A0A0A0MQY5 61 aa5.34□□□□□ -1.55
USB1-210ENST00000565151 A8MU10 97 aa5.28□□□□□ -1.56
USB1-210ENST00000565151 MT1GP13640 62 aa5.28□□□□□ -1.56
USB1-210ENST00000565151 MT1MQ8N339 61 aa5.25□□□□□ -1.57
USB1-210ENST00000565151 MT1LQ93083 61 aa5.24□□□□□ -1.57
USB1-210ENST00000565151 C10orf95Q9H7T3 257 aa5.22□□□□□ -1.57
USB1-210ENST00000565151 A0A1B0GU69 56 aa5.2□□□□□ -1.58
USB1-210ENST00000565151 LCE3AQ5TA76 89 aa5.2□□□□□ -1.58
USB1-210ENST00000565151 KRTAP4-3Q9BYR4 195 aa5.2□□□□□ -1.58
USB1-210ENST00000565151 SMIM26A0A096LP01 95 aa5.17□□□□□ -1.58
USB1-210ENST00000565151 PP632Q6XCG6 107 aa5.15□□□□□ -1.59
USB1-210ENST00000565151 HMCN1Q96RW7 5635 aa5.15□□□□□ -1.59
USB1-210ENST00000565151 KRTAP15-1Q3LI76 137 aa5.13□□□□□ -1.59
USB1-210ENST00000565151 CCDC179H3BU77 68 aa5.11□□□□□ -1.59
USB1-210ENST00000565151 ANAPC13Q9BS18 74 aa5.11□□□□□ -1.59
USB1-210ENST00000565151 MT4P47944 62 aa5.1□□□□□ -1.59
USB1-210ENST00000565151 TNP1P09430 55 aa5.08□□□□□ -1.6
USB1-210ENST00000565151 KRTAP5-4Q6L8H1 288 aa5.07□□□□□ -1.6
USB1-210ENST00000565151 AHNAK2Q8IVF2 5795 aa5.05□□□□□ -1.6
USB1-210ENST00000565151 LINC01558Q9Y6Z2 57 aa5□□□□□ -1.61
USB1-210ENST00000565151 KRTAP12-3P60328 96 aa4.96□□□□□ -1.62
USB1-210ENST00000565151 RPS28P62857 69 aaKnown RBP4.95□□□□□ -1.62
USB1-210ENST00000565151 PRR15LQ9BU68 103 aa4.94□□□□□ -1.62
USB1-210ENST00000565151 ATP5EP56381 51 aaPredicted RBP4.93□□□□□ -1.62
USB1-210ENST00000565151 KRTAP5-10Q6L8G5 202 aa4.88□□□□□ -1.63
USB1-210ENST00000565151 KRTAP5-5Q701N2 237 aaPredicted RBP4.86□□□□□ -1.63
USB1-210ENST00000565151 TMEM258P61165 79 aa4.85□□□□□ -1.63
USB1-210ENST00000565151 UQCR11O14957 56 aa4.83□□□□□ -1.64
USB1-210ENST00000565151 KRTAP20-2Q3LI61 65 aa4.77□□□□□ -1.65
USB1-210ENST00000565151 SYNE1Q8NF91 8797 aaKnown RBP4.75□□□□□ -1.65
USB1-210ENST00000565151 MIR22HGQ0VDD5 57 aa4.74□□□□□ -1.65
USB1-210ENST00000565151 KRTAP25-1Q3LHN0 102 aa4.74□□□□□ -1.65
USB1-210ENST00000565151 SPRR5A0A1B0GTR4 108 aa4.69□□□□□ -1.66
USB1-210ENST00000565151 KRTAP5-7Q6L8G8 165 aa4.68□□□□□ -1.66
USB1-210ENST00000565151 PRO0628Q9UI54 55 aa4.66□□□□□ -1.66
USB1-210ENST00000565151 PSPHP1O15172 72 aa4.63□□□□□ -1.67
USB1-210ENST00000565151 KRTAP12-4P60329 112 aa4.61□□□□□ -1.67
USB1-210ENST00000565151 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.59□□□□□ -1.67
USB1-210ENST00000565151 Q1T7F1 81 aa4.57□□□□□ -1.68
USB1-210ENST00000565151 LCE3CQ5T5A8 94 aa4.57□□□□□ -1.68
USB1-210ENST00000565151 K7ERS5 55 aa4.54□□□□□ -1.68
USB1-210ENST00000565151 KRTAP5-11Q6L8G4 156 aa4.5□□□□□ -1.69
USB1-210ENST00000565151 V9GYY9 64 aa4.5□□□□□ -1.69
USB1-210ENST00000565151 KRTAP6-1Q3LI64 71 aa4.47□□□□□ -1.69
USB1-210ENST00000565151 KRTAP9-6A8MVA2 160 aa4.44□□□□□ -1.7
USB1-210ENST00000565151 KRTAP5-2Q701N4 177 aa4.44□□□□□ -1.7
USB1-210ENST00000565151 BRK1Q8WUW1 75 aa4.44□□□□□ -1.7
USB1-210ENST00000565151 MT1AP04731 61 aa4.43□□□□□ -1.7
USB1-210ENST00000565151 A6NED7 52 aa4.4□□□□□ -1.71
USB1-210ENST00000565151 PRAC1Q96KF2 57 aa4.39□□□□□ -1.71
USB1-210ENST00000565151 PMAIP1Q13794 54 aa4.38□□□□□ -1.71
USB1-210ENST00000565151 CDC42SE1Q9NRR8 79 aa4.36□□□□□ -1.71
USB1-210ENST00000565151 ROMO1P60602 79 aa4.33□□□□□ -1.72
USB1-210ENST00000565151 KRTAP5-8O75690 187 aa4.26□□□□□ -1.73
USB1-210ENST00000565151 KRTAP6-2Q3LI66 62 aa4.26□□□□□ -1.73
USB1-210ENST00000565151 OBSCNQ5VST9 7968 aa4.26□□□□□ -1.73
USB1-210ENST00000565151 KTN1-AS1Q86SY8 53 aa4.24□□□□□ -1.73
USB1-210ENST00000565151 LCE1EQ5T753 118 aa4.23□□□□□ -1.73
USB1-210ENST00000565151 AHNAKQ09666 5890 aaKnown RBP4.12□□□□□ -1.75
USB1-210ENST00000565151 MUC5ACP98088 5654 aa4.1□□□□□ -1.75
USB1-210ENST00000565151 MUC5BQ9HC84 5762 aaPredicted RBP4.1□□□□□ -1.75
USB1-210ENST00000565151 NDUFAF8A1L188 74 aa4.09□□□□□ -1.75
USB1-210ENST00000565151 MT3P25713 68 aa4.03□□□□□ -1.76
USB1-210ENST00000565151 KRTAP5-1Q6L8H4 278 aa4□□□□□ -1.77
USB1-210ENST00000565151 KRTAP4-4Q9BYR3 166 aa3.82□□□□□ -1.8
USB1-210ENST00000565151 LCE1FQ5T754 118 aa3.63□□□□□ -1.83
USB1-210ENST00000565151 LCE1BQ5T7P3 118 aa3.53□□□□□ -1.84
USB1-210ENST00000565151 LCE1CQ5T751 118 aa3.47□□□□□ -1.85
USB1-210ENST00000565151 LCE3DQ9BYE3 92 aa3.24□□□□□ -1.89
USB1-210ENST00000565151 LUZP6Q538Z0 58 aa3.16□□□□□ -1.9
USB1-210ENST00000565151 LCE3EQ5T5B0 92 aa3.06□□□□□ -1.92
USB1-210ENST00000565151 KRTAP21-2Q3LI59 83 aa2.96□□□□□ -1.94
USB1-210ENST00000565151 INE1O15225 51 aa2.89□□□□□ -1.95
USB1-210ENST00000565151 PHGR1C9JFL3 82 aa2.8□□□□□ -1.96
USB1-210ENST00000565151 MUC19Q7Z5P9 8384 aa2.63□□□□□ -1.99
USB1-210ENST00000565151 PRM1P04553 51 aa2.25□□□□□ -2.05
USB1-210ENST00000565151 KRTAP21-1Q3LI58 79 aa2.09□□□□□ -2.07
USB1-210ENST00000565151 MUC16Q8WXI7 14507 aa1.86□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 75.6 ms