RNA–Protein interactions for RNA: ENST00000565143.1

PKM-214, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 2,301 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-214ENST00000565143 KRTAP4-7Q9BYR0 210 aa4.4□□□□□ -1.7
PKM-214ENST00000565143 CRCT1Q9UGL9 99 aa4.4□□□□□ -1.7
PKM-214ENST00000565143 KRTAP2-3P0C7H8 128 aa4.37□□□□□ -1.71
PKM-214ENST00000565143 KRTAP2-4Q9BYR9 128 aa4.37□□□□□ -1.71
PKM-214ENST00000565143 KRTAP2-1Q9BYU5 128 aa4.37□□□□□ -1.71
PKM-214ENST00000565143 KRTAP9-6A0A140TA67 174 aa4.29□□□□□ -1.72
PKM-214ENST00000565143 MACF1Q9UPN3 7388 aaKnown RBP4.26□□□□□ -1.73
PKM-214ENST00000565143 MUC12Q9UKN1 5478 aa4.24□□□□□ -1.73
PKM-214ENST00000565143 MT1GP13640 62 aa4.18□□□□□ -1.74
PKM-214ENST00000565143 KRTAP19-3Q7Z4W3 81 aa4.18□□□□□ -1.74
PKM-214ENST00000565143 SYNE2Q8WXH0 6885 aaKnown RBP4.18□□□□□ -1.74
PKM-214ENST00000565143 MT1MQ8N339 61 aa4.16□□□□□ -1.74
PKM-214ENST00000565143 KRTAP4-3Q9BYR4 195 aa4.13□□□□□ -1.75
PKM-214ENST00000565143 LOC100996750A0A140TA64 210 aa4.11□□□□□ -1.75
PKM-214ENST00000565143 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.11□□□□□ -1.75
PKM-214ENST00000565143 LCE5AQ5TCM9 118 aa4.03□□□□□ -1.76
PKM-214ENST00000565143 DSTQ03001 7570 aaKnown RBP4.01□□□□□ -1.77
PKM-214ENST00000565143 SPRR2FQ96RM1 72 aa4□□□□□ -1.77
PKM-214ENST00000565143 KRTAP2-2Q9BYT5 123 aa3.97□□□□□ -1.77
PKM-214ENST00000565143 MDN1Q9NU22 5596 aa3.95□□□□□ -1.78
PKM-214ENST00000565143 KRTAP5-9P26371 169 aa3.94□□□□□ -1.78
PKM-214ENST00000565143 KRTAP9-7A8MTY7 169 aa3.91□□□□□ -1.78
PKM-214ENST00000565143 KRTAP6-3Q3LI67 103 aa3.91□□□□□ -1.78
PKM-214ENST00000565143 KRTAP12-4P60329 112 aa3.83□□□□□ -1.8
PKM-214ENST00000565143 LCE1AQ5T7P2 110 aa3.82□□□□□ -1.8
PKM-214ENST00000565143 LCE3BQ5TA77 95 aa3.79□□□□□ -1.8
PKM-214ENST00000565143 SPRR2EP22531 72 aa3.78□□□□□ -1.8
PKM-214ENST00000565143 SPRR2BP35325 72 aa3.78□□□□□ -1.8
PKM-214ENST00000565143 SPRR2AP35326 72 aa3.78□□□□□ -1.8
PKM-214ENST00000565143 NEBP20929 6669 aa3.78□□□□□ -1.8
PKM-214ENST00000565143 MT1AP04731 61 aa3.76□□□□□ -1.81
PKM-214ENST00000565143 KRTAP6-1Q3LI64 71 aa3.75□□□□□ -1.81
PKM-214ENST00000565143 SYNE1Q8NF91 8797 aaKnown RBP3.69□□□□□ -1.82
PKM-214ENST00000565143 KRTAP5-5Q701N2 237 aaPredicted RBP3.68□□□□□ -1.82
PKM-214ENST00000565143 KRTAP4-9Q9BYQ8 210 aa3.66□□□□□ -1.82
PKM-214ENST00000565143 SPRR2DP22532 72 aa3.64□□□□□ -1.83
PKM-214ENST00000565143 LCE3DQ9BYE3 92 aa3.62□□□□□ -1.83
PKM-214ENST00000565143 LCE3EQ5T5B0 92 aa3.58□□□□□ -1.84
PKM-214ENST00000565143 LCE1FQ5T754 118 aa3.54□□□□□ -1.84
PKM-214ENST00000565143 KRTAP9-4Q9BYQ2 154 aa3.54□□□□□ -1.84
PKM-214ENST00000565143 LCE1EQ5T753 118 aa3.53□□□□□ -1.84
PKM-214ENST00000565143 KRTAP20-1Q3LI63 56 aa3.43□□□□□ -1.86
PKM-214ENST00000565143 MT3P25713 68 aa3.39□□□□□ -1.87
PKM-214ENST00000565143 LCE1DQ5T752 114 aa3.39□□□□□ -1.87
PKM-214ENST00000565143 PRM1P04553 51 aa3.37□□□□□ -1.87
PKM-214ENST00000565143 KRTAP6-2Q3LI66 62 aa3.36□□□□□ -1.87
PKM-214ENST00000565143 OBSCNQ5VST9 7968 aa3.34□□□□□ -1.87
PKM-214ENST00000565143 KRTAP5-4Q6L8H1 288 aa3.27□□□□□ -1.89
PKM-214ENST00000565143 MT4P47944 62 aa3.21□□□□□ -1.89
PKM-214ENST00000565143 KRTAP4-6Q9BYQ5 205 aa3.2□□□□□ -1.9
PKM-214ENST00000565143 LCE4AQ5TA78 99 aa3.16□□□□□ -1.9
PKM-214ENST00000565143 HMCN1Q96RW7 5635 aa3.16□□□□□ -1.9
PKM-214ENST00000565143 KRTAP9-9Q9BYP9 154 aa3.14□□□□□ -1.91
PKM-214ENST00000565143 KRTAP20-2Q3LI61 65 aa3.08□□□□□ -1.92
PKM-214ENST00000565143 KRTAP5-2Q701N4 177 aa3.05□□□□□ -1.92
PKM-214ENST00000565143 KRTAP5-3Q6L8H2 238 aa2.98□□□□□ -1.93
PKM-214ENST00000565143 AHNAK2Q8IVF2 5795 aa2.86□□□□□ -1.95
PKM-214ENST00000565143 MUC5ACP98088 5654 aa2.78□□□□□ -1.96
PKM-214ENST00000565143 GPR98Q8WXG9 6306 aa2.72□□□□□ -1.97
PKM-214ENST00000565143 KRTAP5-10Q6L8G5 202 aa2.7□□□□□ -1.98
PKM-214ENST00000565143 KRTAP4-11Q9BYQ6 195 aa2.69□□□□□ -1.98
PKM-214ENST00000565143 LCE1BQ5T7P3 118 aa2.68□□□□□ -1.98
PKM-214ENST00000565143 KRTAP5-1Q6L8H4 278 aa2.63□□□□□ -1.99
PKM-214ENST00000565143 LCE1CQ5T751 118 aa2.62□□□□□ -1.99
PKM-214ENST00000565143 KRTAP5-8O75690 187 aa2.62□□□□□ -1.99
PKM-214ENST00000565143 KRTAP4-2Q9BYR5 136 aa2.6□□□□□ -1.99
PKM-214ENST00000565143 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.49□□□□□ -2.01
PKM-214ENST00000565143 KRTAP5-7Q6L8G8 165 aa2.48□□□□□ -2.01
PKM-214ENST00000565143 KRTAP21-2Q3LI59 83 aa2.43□□□□□ -2.02
PKM-214ENST00000565143 MUC5BQ9HC84 5762 aaPredicted RBP2.32□□□□□ -2.04
PKM-214ENST00000565143 KRTAP5-11Q6L8G4 156 aa2.26□□□□□ -2.05
PKM-214ENST00000565143 MUC19Q7Z5P9 8384 aa2.2□□□□□ -2.06
PKM-214ENST00000565143 KRTAP4-4Q9BYR3 166 aa2.2□□□□□ -2.06
PKM-214ENST00000565143 AHNAKQ09666 5890 aaKnown RBP2.19□□□□□ -2.06
PKM-214ENST00000565143 KRTAP21-1Q3LI58 79 aa2.14□□□□□ -2.07
PKM-214ENST00000565143 KRTAP4-12Q9BQ66 201 aa2.14□□□□□ -2.07
PKM-214ENST00000565143 PHGR1C9JFL3 82 aa1.94□□□□□ -2.1
PKM-214ENST00000565143 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 113 ms