RNA–Protein interactions for RNA: ENST00000564791.5

SNX29-204, Transcript of sorting nexin 29, humanhuman

TSL 1 (best)

Gene SNX29, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-204ENST00000564791 KRTAP19-7Q3SYF9 63 aa4.17□□□□□ -1.74
SNX29-204ENST00000564791 MT1EP04732 61 aa4.1□□□□□ -1.75
SNX29-204ENST00000564791 MUC12Q9UKN1 5478 aa4.08□□□□□ -1.76
SNX29-204ENST00000564791 SPRR2FQ96RM1 72 aa4.06□□□□□ -1.76
SNX29-204ENST00000564791 KRTAP5-9P26371 169 aa4.03□□□□□ -1.77
SNX29-204ENST00000564791 MT1LQ93083 61 aa4.02□□□□□ -1.77
SNX29-204ENST00000564791 KRTAP6-3Q3LI67 103 aa3.99□□□□□ -1.77
SNX29-204ENST00000564791 MDN1Q9NU22 5596 aa3.97□□□□□ -1.77
SNX29-204ENST00000564791 KRTAP19-3Q7Z4W3 81 aa3.95□□□□□ -1.78
SNX29-204ENST00000564791 NEBP20929 6669 aa3.94□□□□□ -1.78
SNX29-204ENST00000564791 INE1O15225 51 aa3.94□□□□□ -1.78
SNX29-204ENST00000564791 LCE3CQ5T5A8 94 aa3.92□□□□□ -1.78
SNX29-204ENST00000564791 KRTAP20-1Q3LI63 56 aa3.92□□□□□ -1.78
SNX29-204ENST00000564791 MT1GP13640 62 aa3.89□□□□□ -1.79
SNX29-204ENST00000564791 KRTAP19-4Q3LI73 84 aa3.89□□□□□ -1.79
SNX29-204ENST00000564791 LCE1AQ5T7P2 110 aa3.89□□□□□ -1.79
SNX29-204ENST00000564791 KRTAP4-7Q9BYR0 210 aa3.89□□□□□ -1.79
SNX29-204ENST00000564791 LCE5AQ5TCM9 118 aa3.88□□□□□ -1.79
SNX29-204ENST00000564791 SPRR2EP22531 72 aa3.88□□□□□ -1.79
SNX29-204ENST00000564791 SPRR2BP35325 72 aa3.88□□□□□ -1.79
SNX29-204ENST00000564791 SPRR2AP35326 72 aa3.88□□□□□ -1.79
SNX29-204ENST00000564791 MT1MQ8N339 61 aa3.88□□□□□ -1.79
SNX29-204ENST00000564791 SPRR5A0A1B0GTR4 108 aa3.86□□□□□ -1.79
SNX29-204ENST00000564791 KRTAP4-3Q9BYR4 195 aa3.81□□□□□ -1.8
SNX29-204ENST00000564791 LCE3BQ5TA77 95 aa3.79□□□□□ -1.8
SNX29-204ENST00000564791 SPRR2DP22532 72 aa3.73□□□□□ -1.81
SNX29-204ENST00000564791 KRTAP9-9Q9BYP9 154 aa3.73□□□□□ -1.81
SNX29-204ENST00000564791 KRTAP9-4Q9BYQ2 154 aa3.73□□□□□ -1.81
SNX29-204ENST00000564791 DSTQ03001 7570 aaKnown RBP3.73□□□□□ -1.81
SNX29-204ENST00000564791 KRTAP9-6A8MVA2 160 aa3.73□□□□□ -1.81
SNX29-204ENST00000564791 GPR98Q8WXG9 6306 aa3.72□□□□□ -1.81
SNX29-204ENST00000564791 KRTAP4-12Q9BQ66 201 aa3.71□□□□□ -1.82
SNX29-204ENST00000564791 KRTAP2-3P0C7H8 128 aa3.63□□□□□ -1.83
SNX29-204ENST00000564791 KRTAP2-4Q9BYR9 128 aa3.63□□□□□ -1.83
SNX29-204ENST00000564791 LCE1DQ5T752 114 aa3.55□□□□□ -1.84
SNX29-204ENST00000564791 KRTAP5-5Q701N2 237 aaPredicted RBP3.49□□□□□ -1.85
SNX29-204ENST00000564791 KRTAP4-9Q9BYQ8 210 aa3.48□□□□□ -1.85
SNX29-204ENST00000564791 KRTAP4-2Q9BYR5 136 aa3.48□□□□□ -1.85
SNX29-204ENST00000564791 KRTAP2-2Q9BYT5 123 aa3.47□□□□□ -1.85
SNX29-204ENST00000564791 KRTAP2-1Q9BYU5 128 aa3.47□□□□□ -1.85
SNX29-204ENST00000564791 MT1AP04731 61 aa3.41□□□□□ -1.86
SNX29-204ENST00000564791 KRTAP6-1Q3LI64 71 aa3.39□□□□□ -1.87
SNX29-204ENST00000564791 KRTAP5-4Q6L8H1 288 aa3.36□□□□□ -1.87
SNX29-204ENST00000564791 SYNE1Q8NF91 8797 aaKnown RBP3.33□□□□□ -1.88
SNX29-204ENST00000564791 KRTAP5-3Q6L8H2 238 aa3.31□□□□□ -1.88
SNX29-204ENST00000564791 KRTAP4-11Q9BYQ6 195 aa3.31□□□□□ -1.88
SNX29-204ENST00000564791 LCE4AQ5TA78 99 aa3.3□□□□□ -1.88
SNX29-204ENST00000564791 MT4P47944 62 aa3.25□□□□□ -1.89
SNX29-204ENST00000564791 KRTAP12-4P60329 112 aa3.24□□□□□ -1.89
SNX29-204ENST00000564791 HMCN1Q96RW7 5635 aa3.22□□□□□ -1.89
SNX29-204ENST00000564791 KRTAP20-2Q3LI61 65 aa3.15□□□□□ -1.91
SNX29-204ENST00000564791 KRTAP6-2Q3LI66 62 aa3.13□□□□□ -1.91
SNX29-204ENST00000564791 AHNAK2Q8IVF2 5795 aa3.13□□□□□ -1.91
SNX29-204ENST00000564791 MT3P25713 68 aa3.08□□□□□ -1.92
SNX29-204ENST00000564791 KRTAP5-10Q6L8G5 202 aa3.07□□□□□ -1.92
SNX29-204ENST00000564791 KRTAP5-7Q6L8G8 165 aa3.05□□□□□ -1.92
SNX29-204ENST00000564791 KRTAP5-2Q701N4 177 aa3.04□□□□□ -1.92
SNX29-204ENST00000564791 LCE3DQ9BYE3 92 aa2.93□□□□□ -1.94
SNX29-204ENST00000564791 OBSCNQ5VST9 7968 aa2.88□□□□□ -1.95
SNX29-204ENST00000564791 AHNAKQ09666 5890 aaKnown RBP2.86□□□□□ -1.95
SNX29-204ENST00000564791 LCE3EQ5T5B0 92 aa2.84□□□□□ -1.95
SNX29-204ENST00000564791 MUC5BQ9HC84 5762 aaPredicted RBP2.72□□□□□ -1.97
SNX29-204ENST00000564791 MUC5ACP98088 5654 aa2.69□□□□□ -1.98
SNX29-204ENST00000564791 LCE1EQ5T753 118 aa2.68□□□□□ -1.98
SNX29-204ENST00000564791 KRTAP5-8O75690 187 aa2.64□□□□□ -1.99
SNX29-204ENST00000564791 KRTAP5-1Q6L8H4 278 aa2.64□□□□□ -1.99
SNX29-204ENST00000564791 LCE1FQ5T754 118 aa2.6□□□□□ -1.99
SNX29-204ENST00000564791 LCE1BQ5T7P3 118 aa2.54□□□□□ -2
SNX29-204ENST00000564791 LCE1CQ5T751 118 aa2.5□□□□□ -2.01
SNX29-204ENST00000564791 PRM1P04553 51 aa2.46□□□□□ -2.02
SNX29-204ENST00000564791 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.43□□□□□ -2.02
SNX29-204ENST00000564791 KRTAP5-11Q6L8G4 156 aa2.22□□□□□ -2.05
SNX29-204ENST00000564791 KRTAP21-2Q3LI59 83 aa2.21□□□□□ -2.06
SNX29-204ENST00000564791 KRTAP4-4Q9BYR3 166 aa2□□□□□ -2.09
SNX29-204ENST00000564791 PHGR1C9JFL3 82 aa1.9□□□□□ -2.11
SNX29-204ENST00000564791 MUC19Q7Z5P9 8384 aa1.72□□□□□ -2.13
SNX29-204ENST00000564791 KRTAP21-1Q3LI58 79 aa1.62□□□□□ -2.15
SNX29-204ENST00000564791 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 12.3 ms