RNA–Protein interactions for RNA: ENST00000564547.1

TRAPPC2L-208, Transcript of trafficking protein particle complex 2 like, humanhuman

TSL 2

Gene TRAPPC2L, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2L-208ENST00000564547 KRTAP4-2Q9BYR5 136 aa5.21□□□□□ -1.58
TRAPPC2L-208ENST00000564547 LINC01558Q9Y6Z2 57 aa5.21□□□□□ -1.58
TRAPPC2L-208ENST00000564547 KTN1-AS1Q86SY8 53 aa5.2□□□□□ -1.58
TRAPPC2L-208ENST00000564547 COA5Q86WW8 74 aa5.2□□□□□ -1.58
TRAPPC2L-208ENST00000564547 PRR15LQ9BU68 103 aa5.2□□□□□ -1.58
TRAPPC2L-208ENST00000564547 MT4P47944 62 aa5.19□□□□□ -1.58
TRAPPC2L-208ENST00000564547 CDC42SE1Q9NRR8 79 aa5.19□□□□□ -1.58
TRAPPC2L-208ENST00000564547 A6NED7 52 aa5.16□□□□□ -1.58
TRAPPC2L-208ENST00000564547 KRTAP4-11Q9BYQ6 195 aa5.15□□□□□ -1.59
TRAPPC2L-208ENST00000564547 KRTAP19-5Q3LI72 72 aa5.12□□□□□ -1.59
TRAPPC2L-208ENST00000564547 KRTAP4-3Q9BYR4 195 aa5.12□□□□□ -1.59
TRAPPC2L-208ENST00000564547 KRTAP5-10Q6L8G5 202 aa5.1□□□□□ -1.59
TRAPPC2L-208ENST00000564547 SPTSSBQ8NFR3 76 aa5.09□□□□□ -1.59
TRAPPC2L-208ENST00000564547 ACYP2P14621 99 aa5.07□□□□□ -1.6
TRAPPC2L-208ENST00000564547 MT1MQ8N339 61 aa5.07□□□□□ -1.6
TRAPPC2L-208ENST00000564547 MT1GP13640 62 aa5.05□□□□□ -1.6
TRAPPC2L-208ENST00000564547 CAMK2N1Q7Z7J9 78 aa5.03□□□□□ -1.6
TRAPPC2L-208ENST00000564547 KRTAP5-4Q6L8H1 288 aa5.02□□□□□ -1.61
TRAPPC2L-208ENST00000564547 A0A0D9SG42 100 aa5□□□□□ -1.61
TRAPPC2L-208ENST00000564547 MT1LQ93083 61 aa5□□□□□ -1.61
TRAPPC2L-208ENST00000564547 A8MU10 97 aa4.99□□□□□ -1.61
TRAPPC2L-208ENST00000564547 SPATA8Q6RVD6 105 aa4.95□□□□□ -1.62
TRAPPC2L-208ENST00000564547 A0A1B0GU69 56 aa4.93□□□□□ -1.62
TRAPPC2L-208ENST00000564547 UQCR11O14957 56 aa4.92□□□□□ -1.62
TRAPPC2L-208ENST00000564547 KRTAP5-7Q6L8G8 165 aa4.89□□□□□ -1.63
TRAPPC2L-208ENST00000564547 PP632Q6XCG6 107 aa4.89□□□□□ -1.63
TRAPPC2L-208ENST00000564547 KRTAP5-3Q6L8H2 238 aa4.88□□□□□ -1.63
TRAPPC2L-208ENST00000564547 MIR22HGQ0VDD5 57 aa4.87□□□□□ -1.63
TRAPPC2L-208ENST00000564547 KRTAP12-1P59990 96 aa4.82□□□□□ -1.64
TRAPPC2L-208ENST00000564547 LCE3AQ5TA76 89 aa4.81□□□□□ -1.64
TRAPPC2L-208ENST00000564547 C10orf95Q9H7T3 257 aa4.81□□□□□ -1.64
TRAPPC2L-208ENST00000564547 SPINT4Q6UDR6 99 aa4.8□□□□□ -1.64
TRAPPC2L-208ENST00000564547 KRTAP20-2Q3LI61 65 aa4.77□□□□□ -1.65
TRAPPC2L-208ENST00000564547 SYNE1Q8NF91 8797 aaKnown RBP4.75□□□□□ -1.65
TRAPPC2L-208ENST00000564547 PRAC1Q96KF2 57 aa4.72□□□□□ -1.65
TRAPPC2L-208ENST00000564547 KRTAP5-5Q701N2 237 aaPredicted RBP4.7□□□□□ -1.66
TRAPPC2L-208ENST00000564547 SPRR5A0A1B0GTR4 108 aa4.67□□□□□ -1.66
TRAPPC2L-208ENST00000564547 K7ERS5 55 aa4.66□□□□□ -1.66
TRAPPC2L-208ENST00000564547 A0A1B0GU33 70 aa4.63□□□□□ -1.67
TRAPPC2L-208ENST00000564547 KRTAP25-1Q3LHN0 102 aa4.6□□□□□ -1.67
TRAPPC2L-208ENST00000564547 KRTAP12-3P60328 96 aa4.54□□□□□ -1.68
TRAPPC2L-208ENST00000564547 TNP1P09430 55 aa4.52□□□□□ -1.69
TRAPPC2L-208ENST00000564547 AHNAKQ09666 5890 aaKnown RBP4.52□□□□□ -1.69
TRAPPC2L-208ENST00000564547 ROMO1P60602 79 aa4.5□□□□□ -1.69
TRAPPC2L-208ENST00000564547 KRTAP12-4P60329 112 aa4.49□□□□□ -1.69
TRAPPC2L-208ENST00000564547 MUC5BQ9HC84 5762 aaPredicted RBP4.46□□□□□ -1.7
TRAPPC2L-208ENST00000564547 MUC5ACP98088 5654 aa4.4□□□□□ -1.7
TRAPPC2L-208ENST00000564547 KRTAP5-2Q701N4 177 aa4.35□□□□□ -1.71
TRAPPC2L-208ENST00000564547 KRTAP23-1A1A580 65 aa4.34□□□□□ -1.71
TRAPPC2L-208ENST00000564547 KRTAP5-8O75690 187 aa4.33□□□□□ -1.72
TRAPPC2L-208ENST00000564547 KRTAP6-1Q3LI64 71 aa4.3□□□□□ -1.72
TRAPPC2L-208ENST00000564547 KRTAP15-1Q3LI76 137 aa4.29□□□□□ -1.72
TRAPPC2L-208ENST00000564547 OBSCNQ5VST9 7968 aa4.28□□□□□ -1.72
TRAPPC2L-208ENST00000564547 MT1AP04731 61 aa4.2□□□□□ -1.74
TRAPPC2L-208ENST00000564547 LCE3CQ5T5A8 94 aa4.16□□□□□ -1.74
TRAPPC2L-208ENST00000564547 KRTAP6-2Q3LI66 62 aa4.15□□□□□ -1.75
TRAPPC2L-208ENST00000564547 KRTAP9-6A8MVA2 160 aa4.12□□□□□ -1.75
TRAPPC2L-208ENST00000564547 NDUFAF8A1L188 74 aa4.09□□□□□ -1.75
TRAPPC2L-208ENST00000564547 KRTAP5-1Q6L8H4 278 aa3.99□□□□□ -1.77
TRAPPC2L-208ENST00000564547 LUZP6Q538Z0 58 aa3.92□□□□□ -1.78
TRAPPC2L-208ENST00000564547 A0A0A0MQY5 61 aa3.88□□□□□ -1.79
TRAPPC2L-208ENST00000564547 MT3P25713 68 aa3.8□□□□□ -1.8
TRAPPC2L-208ENST00000564547 LCE1EQ5T753 118 aa3.55□□□□□ -1.84
TRAPPC2L-208ENST00000564547 INE1O15225 51 aa3.54□□□□□ -1.84
TRAPPC2L-208ENST00000564547 LCE1BQ5T7P3 118 aa3.48□□□□□ -1.85
TRAPPC2L-208ENST00000564547 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.48□□□□□ -1.85
TRAPPC2L-208ENST00000564547 KRTAP5-11Q6L8G4 156 aa3.45□□□□□ -1.86
TRAPPC2L-208ENST00000564547 LCE1CQ5T751 118 aa3.33□□□□□ -1.88
TRAPPC2L-208ENST00000564547 LCE1FQ5T754 118 aa2.97□□□□□ -1.93
TRAPPC2L-208ENST00000564547 PHGR1C9JFL3 82 aa2.94□□□□□ -1.94
TRAPPC2L-208ENST00000564547 LCE3DQ9BYE3 92 aa2.88□□□□□ -1.95
TRAPPC2L-208ENST00000564547 KRTAP4-4Q9BYR3 166 aa2.87□□□□□ -1.95
TRAPPC2L-208ENST00000564547 KRTAP21-2Q3LI59 83 aa2.85□□□□□ -1.95
TRAPPC2L-208ENST00000564547 MUC19Q7Z5P9 8384 aa2.69□□□□□ -1.98
TRAPPC2L-208ENST00000564547 LCE3EQ5T5B0 92 aa2.64□□□□□ -1.99
TRAPPC2L-208ENST00000564547 PRM1P04553 51 aa2.31□□□□□ -2.04
TRAPPC2L-208ENST00000564547 KRTAP21-1Q3LI58 79 aa2.17□□□□□ -2.06
TRAPPC2L-208ENST00000564547 MUC16Q8WXI7 14507 aa1.85□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 99.1 ms