RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-231ENST00000564288 KRTAP2-2Q9BYT5 123 aa1.23□□□□□ -2.21
MACF1-231ENST00000564288 KRTAP19-7Q3SYF9 63 aa1.23□□□□□ -2.21
MACF1-231ENST00000564288 KRTAP9-6A8MVA2 160 aa1.23□□□□□ -2.21
MACF1-231ENST00000564288 SPRR2EP22531 72 aa1.23□□□□□ -2.21
MACF1-231ENST00000564288 KRTAP4-7Q9BYR0 210 aa1.22□□□□□ -2.21
MACF1-231ENST00000564288 LCE2DQ5TA82 110 aaPredicted RBP1.21□□□□□ -2.22
MACF1-231ENST00000564288 KRTAP17-1Q9BYP8 105 aa1.19□□□□□ -2.22
MACF1-231ENST00000564288 RNF213Q63HN8 5207 aa1.19□□□□□ -2.22
MACF1-231ENST00000564288 ABCA13Q86UQ4 5058 aa1.19□□□□□ -2.22
MACF1-231ENST00000564288 UBR4Q5T4S7 5183 aa1.18□□□□□ -2.22
MACF1-231ENST00000564288 LCE5AQ5TCM9 118 aa1.17□□□□□ -2.22
MACF1-231ENST00000564288 LCE2AQ5TA79 106 aaPredicted RBP1.16□□□□□ -2.22
MACF1-231ENST00000564288 KRTAP6-3Q3LI67 103 aa1.14□□□□□ -2.23
MACF1-231ENST00000564288 KRTAP6-2Q3LI66 62 aa1.14□□□□□ -2.23
MACF1-231ENST00000564288 LCE4AQ5TA78 99 aa1.13□□□□□ -2.23
MACF1-231ENST00000564288 LOC100996750A0A140TA64 210 aa1.13□□□□□ -2.23
MACF1-231ENST00000564288 KRTAP9-4Q9BYQ2 154 aa1.13□□□□□ -2.23
MACF1-231ENST00000564288 LPAP08519 4548 aa1.12□□□□□ -2.23
MACF1-231ENST00000564288 MDN1Q9NU22 5596 aa1.11□□□□□ -2.23
MACF1-231ENST00000564288 HMCN2Q8NDA2 5059 aa1.1□□□□□ -2.23
MACF1-231ENST00000564288 KRTAP9-6A0A140TA67 174 aa1.09□□□□□ -2.24
MACF1-231ENST00000564288 KRTAP4-9Q9BYQ8 210 aa1.09□□□□□ -2.24
MACF1-231ENST00000564288 KRTAP9-2Q9BYQ4 174 aa1.08□□□□□ -2.24
MACF1-231ENST00000564288 KRTAP4-3Q9BYR4 195 aa1.08□□□□□ -2.24
MACF1-231ENST00000564288 FAT4Q6V0I7 4981 aa1.08□□□□□ -2.24
MACF1-231ENST00000564288 KRTAP9-7A8MTY7 169 aa1.07□□□□□ -2.24
MACF1-231ENST00000564288 KRTAP5-9P26371 169 aa1.07□□□□□ -2.24
MACF1-231ENST00000564288 LCE1EQ5T753 118 aa1.06□□□□□ -2.24
MACF1-231ENST00000564288 FCGBPQ9Y6R7 5405 aaPredicted RBP1.04□□□□□ -2.24
MACF1-231ENST00000564288 KRTAP6-1Q3LI64 71 aa1.03□□□□□ -2.24
MACF1-231ENST00000564288 KRTAP5-5Q701N2 237 aaPredicted RBP1.03□□□□□ -2.24
MACF1-231ENST00000564288 MUC12Q9UKN1 5478 aa1.02□□□□□ -2.25
MACF1-231ENST00000564288 MUC2Q02817 5179 aa1.01□□□□□ -2.25
MACF1-231ENST00000564288 LCE1BQ5T7P3 118 aa0.99□□□□□ -2.25
MACF1-231ENST00000564288 USH2AO75445 5202 aa0.98□□□□□ -2.25
MACF1-231ENST00000564288 KMT2DO14686 5537 aa0.98□□□□□ -2.25
MACF1-231ENST00000564288 KRTAP20-1Q3LI63 56 aa0.98□□□□□ -2.25
MACF1-231ENST00000564288 LCE1DQ5T752 114 aa0.98□□□□□ -2.25
MACF1-231ENST00000564288 FSIP2Q5CZC0 6907 aa0.95□□□□□ -2.26
MACF1-231ENST00000564288 MT4P47944 62 aa0.95□□□□□ -2.26
MACF1-231ENST00000564288 MACF1Q9UPN3 7388 aaKnown RBP0.95□□□□□ -2.26
MACF1-231ENST00000564288 SYNE2Q8WXH0 6885 aaKnown RBP0.95□□□□□ -2.26
MACF1-231ENST00000564288 DSTQ03001 7570 aaKnown RBP0.94□□□□□ -2.26
MACF1-231ENST00000564288 SYNE1Q8NF91 8797 aaKnown RBP0.93□□□□□ -2.26
MACF1-231ENST00000564288 GPR98Q8WXG9 6306 aa0.91□□□□□ -2.26
MACF1-231ENST00000564288 KRTAP5-4Q6L8H1 288 aa0.91□□□□□ -2.26
MACF1-231ENST00000564288 LCE1FQ5T754 118 aa0.91□□□□□ -2.26
MACF1-231ENST00000564288 LCE1CQ5T751 118 aa0.91□□□□□ -2.26
MACF1-231ENST00000564288 KRTAP4-11Q9BYQ6 195 aa0.89□□□□□ -2.27
MACF1-231ENST00000564288 AHNAK2Q8IVF2 5795 aa0.89□□□□□ -2.27
MACF1-231ENST00000564288 SSPOA2VEC9 5147 aa0.88□□□□□ -2.27
MACF1-231ENST00000564288 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.85□□□□□ -2.27
MACF1-231ENST00000564288 KRTAP5-2Q701N4 177 aa0.84□□□□□ -2.28
MACF1-231ENST00000564288 KRTAP20-2Q3LI61 65 aa0.84□□□□□ -2.28
MACF1-231ENST00000564288 HMCN1Q96RW7 5635 aa0.84□□□□□ -2.28
MACF1-231ENST00000564288 NEBP20929 6669 aa0.83□□□□□ -2.28
MACF1-231ENST00000564288 KRTAP9-9Q9BYP9 154 aa0.82□□□□□ -2.28
MACF1-231ENST00000564288 OBSCNQ5VST9 7968 aa0.81□□□□□ -2.28
MACF1-231ENST00000564288 KRTAP9-1A8MXZ3 250 aaPredicted RBP0.81□□□□□ -2.28
MACF1-231ENST00000564288 KRTAP5-3Q6L8H2 238 aa0.8□□□□□ -2.28
MACF1-231ENST00000564288 KRTAP5-11Q6L8G4 156 aa0.79□□□□□ -2.28
MACF1-231ENST00000564288 KRTAP5-8O75690 187 aa0.78□□□□□ -2.29
MACF1-231ENST00000564288 KRTAP21-1Q3LI58 79 aa0.77□□□□□ -2.29
MACF1-231ENST00000564288 KRTAP5-1Q6L8H4 278 aa0.77□□□□□ -2.29
MACF1-231ENST00000564288 KRTAP5-10Q6L8G5 202 aa0.76□□□□□ -2.29
MACF1-231ENST00000564288 MUC5ACP98088 5654 aa0.76□□□□□ -2.29
MACF1-231ENST00000564288 KRTAP5-7Q6L8G8 165 aa0.74□□□□□ -2.29
MACF1-231ENST00000564288 KRTAP4-6Q9BYQ5 205 aa0.72□□□□□ -2.29
MACF1-231ENST00000564288 AHNAKQ09666 5890 aaKnown RBP0.72□□□□□ -2.29
MACF1-231ENST00000564288 MUC5BQ9HC84 5762 aaPredicted RBP0.7□□□□□ -2.3
MACF1-231ENST00000564288 KRTAP4-4Q9BYR3 166 aa0.64□□□□□ -2.31
MACF1-231ENST00000564288 KRTAP4-2Q9BYR5 136 aa0.64□□□□□ -2.31
MACF1-231ENST00000564288 MUC19Q7Z5P9 8384 aa0.64□□□□□ -2.31
MACF1-231ENST00000564288 MUC16Q8WXI7 14507 aa0.64□□□□□ -2.31
MACF1-231ENST00000564288 KRTAP21-2Q3LI59 83 aa0.61□□□□□ -2.31
MACF1-231ENST00000564288 PHGR1C9JFL3 82 aa0.61□□□□□ -2.31
MACF1-231ENST00000564288 KRTAP4-12Q9BQ66 201 aa0.57□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 9.6 ms