RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 C10orf95Q9H7T3 257 aa4.08□□□□□ -1.76
UBFD1-202ENST00000563366 PRO2289Q9P1D8 64 aa4.08□□□□□ -1.76
UBFD1-202ENST00000563366 TNP1P09430 55 aa4.04□□□□□ -1.76
UBFD1-202ENST00000563366 PP632Q6XCG6 107 aa3.99□□□□□ -1.77
UBFD1-202ENST00000563366 MT1XP80297 61 aa3.98□□□□□ -1.77
UBFD1-202ENST00000563366 USH2AO75445 5202 aa3.95□□□□□ -1.78
UBFD1-202ENST00000563366 KRTAP19-6Q3LI70 58 aa3.88□□□□□ -1.79
UBFD1-202ENST00000563366 KRTAP5-11Q6L8G4 156 aa3.88□□□□□ -1.79
UBFD1-202ENST00000563366 FSIP2Q5CZC0 6907 aa3.87□□□□□ -1.79
UBFD1-202ENST00000563366 SSPOA2VEC9 5147 aa3.84□□□□□ -1.79
UBFD1-202ENST00000563366 CRCT1Q9UGL9 99 aa3.81□□□□□ -1.8
UBFD1-202ENST00000563366 LUZP6Q538Z0 58 aa3.79□□□□□ -1.8
UBFD1-202ENST00000563366 LCE3AQ5TA76 89 aa3.79□□□□□ -1.8
UBFD1-202ENST00000563366 KRTAP8-1Q8IUC2 63 aa3.76□□□□□ -1.81
UBFD1-202ENST00000563366 LCE3EQ5T5B0 92 aa3.74□□□□□ -1.81
UBFD1-202ENST00000563366 KRTAP9-6A8MVA2 160 aa3.72□□□□□ -1.81
UBFD1-202ENST00000563366 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.7□□□□□ -1.82
UBFD1-202ENST00000563366 KRTAP12-3P60328 96 aa3.67□□□□□ -1.82
UBFD1-202ENST00000563366 FCGBPQ9Y6R7 5405 aaPredicted RBP3.66□□□□□ -1.82
UBFD1-202ENST00000563366 KRTAP19-5Q3LI72 72 aa3.6□□□□□ -1.83
UBFD1-202ENST00000563366 KMT2DO14686 5537 aa3.59□□□□□ -1.84
UBFD1-202ENST00000563366 KRTAP19-7Q3SYF9 63 aa3.55□□□□□ -1.84
UBFD1-202ENST00000563366 MACF1Q9UPN3 7388 aaKnown RBP3.51□□□□□ -1.85
UBFD1-202ENST00000563366 MT1EP04732 61 aa3.5□□□□□ -1.85
UBFD1-202ENST00000563366 SPRR5A0A1B0GTR4 108 aa3.46□□□□□ -1.86
UBFD1-202ENST00000563366 MT1LQ93083 61 aa3.44□□□□□ -1.86
UBFD1-202ENST00000563366 SPRR2FQ96RM1 72 aa3.44□□□□□ -1.86
UBFD1-202ENST00000563366 KRTAP5-9P26371 169 aa3.42□□□□□ -1.86
UBFD1-202ENST00000563366 SYNE2Q8WXH0 6885 aaKnown RBP3.4□□□□□ -1.87
UBFD1-202ENST00000563366 KRTAP19-3Q7Z4W3 81 aa3.39□□□□□ -1.87
UBFD1-202ENST00000563366 MT1GP13640 62 aa3.38□□□□□ -1.87
UBFD1-202ENST00000563366 KRTAP6-3Q3LI67 103 aa3.35□□□□□ -1.87
UBFD1-202ENST00000563366 MUC12Q9UKN1 5478 aa3.33□□□□□ -1.88
UBFD1-202ENST00000563366 MT1MQ8N339 61 aa3.3□□□□□ -1.88
UBFD1-202ENST00000563366 SPRR2EP22531 72 aa3.27□□□□□ -1.89
UBFD1-202ENST00000563366 SPRR2BP35325 72 aa3.27□□□□□ -1.89
UBFD1-202ENST00000563366 SPRR2AP35326 72 aa3.27□□□□□ -1.89
UBFD1-202ENST00000563366 MDN1Q9NU22 5596 aa3.24□□□□□ -1.89
UBFD1-202ENST00000563366 NEBP20929 6669 aa3.21□□□□□ -1.9
UBFD1-202ENST00000563366 KRTAP5-1Q6L8H4 278 aa3.2□□□□□ -1.9
UBFD1-202ENST00000563366 LCE3DQ9BYE3 92 aa3.16□□□□□ -1.9
UBFD1-202ENST00000563366 SPRR2DP22532 72 aa3.15□□□□□ -1.91
UBFD1-202ENST00000563366 KRTAP4-3Q9BYR4 195 aa3.15□□□□□ -1.91
UBFD1-202ENST00000563366 KRTAP20-1Q3LI63 56 aa3.12□□□□□ -1.91
UBFD1-202ENST00000563366 DSTQ03001 7570 aaKnown RBP3.12□□□□□ -1.91
UBFD1-202ENST00000563366 KRTAP5-4Q6L8H1 288 aa3.08□□□□□ -1.92
UBFD1-202ENST00000563366 KRTAP4-4Q9BYR3 166 aa3.08□□□□□ -1.92
UBFD1-202ENST00000563366 KRTAP2-3P0C7H8 128 aa2.99□□□□□ -1.93
UBFD1-202ENST00000563366 KRTAP2-4Q9BYR9 128 aa2.99□□□□□ -1.93
UBFD1-202ENST00000563366 KRTAP2-1Q9BYU5 128 aa2.99□□□□□ -1.93
UBFD1-202ENST00000563366 INE1O15225 51 aa2.97□□□□□ -1.93
UBFD1-202ENST00000563366 KRTAP5-5Q701N2 237 aaPredicted RBP2.97□□□□□ -1.93
UBFD1-202ENST00000563366 MT1AP04731 61 aa2.95□□□□□ -1.94
UBFD1-202ENST00000563366 KRTAP6-1Q3LI64 71 aa2.87□□□□□ -1.95
UBFD1-202ENST00000563366 GPR98Q8WXG9 6306 aa2.84□□□□□ -1.96
UBFD1-202ENST00000563366 KRTAP12-4P60329 112 aa2.82□□□□□ -1.96
UBFD1-202ENST00000563366 SYNE1Q8NF91 8797 aaKnown RBP2.82□□□□□ -1.96
UBFD1-202ENST00000563366 OBSCNQ5VST9 7968 aa2.8□□□□□ -1.96
UBFD1-202ENST00000563366 LCE1CQ5T751 118 aa2.74□□□□□ -1.97
UBFD1-202ENST00000563366 LCE1BQ5T7P3 118 aa2.74□□□□□ -1.97
UBFD1-202ENST00000563366 MT4P47944 62 aa2.7□□□□□ -1.98
UBFD1-202ENST00000563366 KRTAP20-2Q3LI61 65 aa2.65□□□□□ -1.99
UBFD1-202ENST00000563366 KRTAP6-2Q3LI66 62 aa2.65□□□□□ -1.99
UBFD1-202ENST00000563366 HMCN1Q96RW7 5635 aa2.62□□□□□ -1.99
UBFD1-202ENST00000563366 AHNAK2Q8IVF2 5795 aa2.62□□□□□ -1.99
UBFD1-202ENST00000563366 KRTAP5-2Q701N4 177 aa2.58□□□□□ -2
UBFD1-202ENST00000563366 KRTAP5-10Q6L8G5 202 aa2.47□□□□□ -2.01
UBFD1-202ENST00000563366 KRTAP5-7Q6L8G8 165 aa2.37□□□□□ -2.03
UBFD1-202ENST00000563366 AHNAKQ09666 5890 aaKnown RBP2.22□□□□□ -2.05
UBFD1-202ENST00000563366 KRTAP5-8O75690 187 aa2.2□□□□□ -2.06
UBFD1-202ENST00000563366 MUC5BQ9HC84 5762 aaPredicted RBP2.18□□□□□ -2.06
UBFD1-202ENST00000563366 PRM1P04553 51 aa2.17□□□□□ -2.06
UBFD1-202ENST00000563366 MUC5ACP98088 5654 aa2.16□□□□□ -2.06
UBFD1-202ENST00000563366 MUC19Q7Z5P9 8384 aa2.13□□□□□ -2.07
UBFD1-202ENST00000563366 KRTAP21-2Q3LI59 83 aa1.91□□□□□ -2.1
UBFD1-202ENST00000563366 PHGR1C9JFL3 82 aa1.64□□□□□ -2.15
UBFD1-202ENST00000563366 KRTAP21-1Q3LI58 79 aa1.34□□□□□ -2.19
UBFD1-202ENST00000563366 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 138.8 ms