RNA–Protein interactions for RNA: ENST00000563283.1

CNOT1-205, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-205ENST00000563283 LINC01558Q9Y6Z2 57 aa2.22□□□□□ -2.05
CNOT1-205ENST00000563283 SMIM26A0A096LP01 95 aa2.21□□□□□ -2.06
CNOT1-205ENST00000563283 A0A1B0GU33 70 aa2.21□□□□□ -2.06
CNOT1-205ENST00000563283 RPS28P62857 69 aaKnown RBP2.2□□□□□ -2.06
CNOT1-205ENST00000563283 KRTAP13-4Q3LI77 160 aa2.2□□□□□ -2.06
CNOT1-205ENST00000563283 SPATA8Q6RVD6 105 aa2.19□□□□□ -2.06
CNOT1-205ENST00000563283 V9GYY9 64 aa2.19□□□□□ -2.06
CNOT1-205ENST00000563283 A0A0D9SG42 100 aa2.18□□□□□ -2.06
CNOT1-205ENST00000563283 PSPHP1O15172 72 aa2.18□□□□□ -2.06
CNOT1-205ENST00000563283 Q1T7F1 81 aa2.18□□□□□ -2.06
CNOT1-205ENST00000563283 PLAC4Q8WY50 150 aa2.17□□□□□ -2.06
CNOT1-205ENST00000563283 NEBP20929 6669 aa2.14□□□□□ -2.07
CNOT1-205ENST00000563283 SPRR5A0A1B0GTR4 108 aa2.14□□□□□ -2.07
CNOT1-205ENST00000563283 A6NN06 94 aa2.14□□□□□ -2.07
CNOT1-205ENST00000563283 UQCR11O14957 56 aa2.14□□□□□ -2.07
CNOT1-205ENST00000563283 KRTAP6-3Q3LI67 103 aa2.14□□□□□ -2.07
CNOT1-205ENST00000563283 MT1XP80297 61 aa2.13□□□□□ -2.07
CNOT1-205ENST00000563283 SPINT4Q6UDR6 99 aa2.13□□□□□ -2.07
CNOT1-205ENST00000563283 A6NED7 52 aa2.12□□□□□ -2.07
CNOT1-205ENST00000563283 MIR22HGQ0VDD5 57 aa2.12□□□□□ -2.07
CNOT1-205ENST00000563283 CAMK2N1Q7Z7J9 78 aa2.12□□□□□ -2.07
CNOT1-205ENST00000563283 KRTAP12-1P59990 96 aa2.11□□□□□ -2.07
CNOT1-205ENST00000563283 PRO2289Q9P1D8 64 aa2.11□□□□□ -2.07
CNOT1-205ENST00000563283 KMT2DO14686 5537 aa2.11□□□□□ -2.07
CNOT1-205ENST00000563283 KRTAP5-7Q6L8G8 165 aa2.1□□□□□ -2.07
CNOT1-205ENST00000563283 MUC12Q9UKN1 5478 aa2.09□□□□□ -2.07
CNOT1-205ENST00000563283 MUC19Q7Z5P9 8384 aa2.09□□□□□ -2.08
CNOT1-205ENST00000563283 K7ERS5 55 aa2.06□□□□□ -2.08
CNOT1-205ENST00000563283 MDN1Q9NU22 5596 aa2.06□□□□□ -2.08
CNOT1-205ENST00000563283 CDC42SE1Q9NRR8 79 aa2.03□□□□□ -2.08
CNOT1-205ENST00000563283 BRK1Q8WUW1 75 aa2□□□□□ -2.09
CNOT1-205ENST00000563283 C10orf95Q9H7T3 257 aa2□□□□□ -2.09
CNOT1-205ENST00000563283 KRTAP20-1Q3LI63 56 aa1.99□□□□□ -2.09
CNOT1-205ENST00000563283 SPRR2FQ96RM1 72 aa1.98□□□□□ -2.09
CNOT1-205ENST00000563283 TNP1P09430 55 aa1.97□□□□□ -2.09
CNOT1-205ENST00000563283 KRTAP2-3P0C7H8 128 aa1.97□□□□□ -2.09
CNOT1-205ENST00000563283 KRTAP8-1Q8IUC2 63 aa1.97□□□□□ -2.09
CNOT1-205ENST00000563283 KRTAP2-4Q9BYR9 128 aa1.97□□□□□ -2.09
CNOT1-205ENST00000563283 SPRR2EP22531 72 aa1.94□□□□□ -2.1
CNOT1-205ENST00000563283 SPRR2BP35325 72 aa1.94□□□□□ -2.1
CNOT1-205ENST00000563283 SPRR2AP35326 72 aa1.94□□□□□ -2.1
CNOT1-205ENST00000563283 ROMO1P60602 79 aa1.94□□□□□ -2.1
CNOT1-205ENST00000563283 KRTAP25-1Q3LHN0 102 aa1.94□□□□□ -2.1
CNOT1-205ENST00000563283 HMCN1Q96RW7 5635 aa1.93□□□□□ -2.1
CNOT1-205ENST00000563283 KRTAP19-7Q3SYF9 63 aa1.92□□□□□ -2.1
CNOT1-205ENST00000563283 GPR98Q8WXG9 6306 aa1.92□□□□□ -2.1
CNOT1-205ENST00000563283 DSTQ03001 7570 aaKnown RBP1.9□□□□□ -2.1
CNOT1-205ENST00000563283 KRTAP2-1Q9BYU5 128 aa1.9□□□□□ -2.11
CNOT1-205ENST00000563283 PMAIP1Q13794 54 aa1.88□□□□□ -2.11
CNOT1-205ENST00000563283 KRTAP19-5Q3LI72 72 aa1.88□□□□□ -2.11
CNOT1-205ENST00000563283 MT1EP04732 61 aa1.87□□□□□ -2.11
CNOT1-205ENST00000563283 PRO0628Q9UI54 55 aa1.87□□□□□ -2.11
CNOT1-205ENST00000563283 SPRR2DP22532 72 aa1.86□□□□□ -2.11
CNOT1-205ENST00000563283 KRTAP12-3P60328 96 aa1.84□□□□□ -2.11
CNOT1-205ENST00000563283 KRTAP21-2Q3LI59 83 aa1.82□□□□□ -2.12
CNOT1-205ENST00000563283 KRTAP19-3Q7Z4W3 81 aa1.82□□□□□ -2.12
CNOT1-205ENST00000563283 MT1LQ93083 61 aa1.8□□□□□ -2.12
CNOT1-205ENST00000563283 MT1GP13640 62 aa1.79□□□□□ -2.12
CNOT1-205ENST00000563283 MT1MQ8N339 61 aa1.78□□□□□ -2.12
CNOT1-205ENST00000563283 KTN1-AS1Q86SY8 53 aa1.75□□□□□ -2.13
CNOT1-205ENST00000563283 KRTAP12-4P60329 112 aa1.72□□□□□ -2.13
CNOT1-205ENST00000563283 MT4P47944 62 aa1.65□□□□□ -2.15
CNOT1-205ENST00000563283 SYNE1Q8NF91 8797 aaKnown RBP1.65□□□□□ -2.15
CNOT1-205ENST00000563283 AHNAK2Q8IVF2 5795 aa1.62□□□□□ -2.15
CNOT1-205ENST00000563283 KRTAP20-2Q3LI61 65 aa1.57□□□□□ -2.16
CNOT1-205ENST00000563283 KRTAP5-10Q6L8G5 202 aa1.54□□□□□ -2.16
CNOT1-205ENST00000563283 MT1AP04731 61 aa1.53□□□□□ -2.16
CNOT1-205ENST00000563283 KRTAP6-1Q3LI64 71 aa1.53□□□□□ -2.16
CNOT1-205ENST00000563283 AHNAKQ09666 5890 aaKnown RBP1.51□□□□□ -2.17
CNOT1-205ENST00000563283 LUZP6Q538Z0 58 aa1.48□□□□□ -2.17
CNOT1-205ENST00000563283 KRTAP6-2Q3LI66 62 aa1.45□□□□□ -2.18
CNOT1-205ENST00000563283 MUC5BQ9HC84 5762 aaPredicted RBP1.42□□□□□ -2.18
CNOT1-205ENST00000563283 MUC5ACP98088 5654 aa1.33□□□□□ -2.2
CNOT1-205ENST00000563283 INE1O15225 51 aa1.09□□□□□ -2.23
CNOT1-205ENST00000563283 PRM1P04553 51 aa1.01□□□□□ -2.25
CNOT1-205ENST00000563283 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
CNOT1-205ENST00000563283 PHGR1C9JFL3 82 aa0.93□□□□□ -2.26
CNOT1-205ENST00000563283 KRTAP21-1Q3LI58 79 aa0.73□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 10.5 ms