RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 PRO2289Q9P1D8 64 aa5.5□□□□□ -1.53
SPG7-207ENST00000563218 KRTAP4-8A0A0G2JLE6 195 aa5.49□□□□□ -1.53
SPG7-207ENST00000563218 ROMO1P60602 79 aa5.47□□□□□ -1.53
SPG7-207ENST00000563218 KRTAP4-12Q9BQ66 201 aa5.46□□□□□ -1.54
SPG7-207ENST00000563218 LCE3BQ5TA77 95 aa5.42□□□□□ -1.54
SPG7-207ENST00000563218 KRTAP25-1Q3LHN0 102 aa5.38□□□□□ -1.55
SPG7-207ENST00000563218 KRTAP10-7P60409 375 aaPredicted RBP5.37□□□□□ -1.55
SPG7-207ENST00000563218 C10orf95Q9H7T3 257 aa5.35□□□□□ -1.55
SPG7-207ENST00000563218 DSTQ03001 7570 aaKnown RBP5.3□□□□□ -1.56
SPG7-207ENST00000563218 KRTAP10-12P60413 245 aa5.29□□□□□ -1.56
SPG7-207ENST00000563218 TNP1P09430 55 aa5.25□□□□□ -1.57
SPG7-207ENST00000563218 KRTAP4-9Q9BYQ8 210 aa5.25□□□□□ -1.57
SPG7-207ENST00000563218 KRTAP9-9Q9BYP9 154 aa5.2□□□□□ -1.58
SPG7-207ENST00000563218 KRTAP9-4Q9BYQ2 154 aa5.2□□□□□ -1.58
SPG7-207ENST00000563218 KRTAP19-4Q3LI73 84 aa5.19□□□□□ -1.58
SPG7-207ENST00000563218 LCE4AQ5TA78 99 aa5.09□□□□□ -1.59
SPG7-207ENST00000563218 KRTAP23-1A1A580 65 aa5.05□□□□□ -1.6
SPG7-207ENST00000563218 PP632Q6XCG6 107 aa5.05□□□□□ -1.6
SPG7-207ENST00000563218 LCE5AQ5TCM9 118 aa5.03□□□□□ -1.6
SPG7-207ENST00000563218 KRTAP19-7Q3SYF9 63 aa5.02□□□□□ -1.61
SPG7-207ENST00000563218 LCE3AQ5TA76 89 aa5.02□□□□□ -1.61
SPG7-207ENST00000563218 LCE1DQ5T752 114 aa5.01□□□□□ -1.61
SPG7-207ENST00000563218 MT1EP04732 61 aa4.98□□□□□ -1.61
SPG7-207ENST00000563218 KRTAP19-3Q7Z4W3 81 aa4.98□□□□□ -1.61
SPG7-207ENST00000563218 KRTAP5-10Q6L8G5 202 aa4.95□□□□□ -1.62
SPG7-207ENST00000563218 AHNAK2Q8IVF2 5795 aa4.92□□□□□ -1.62
SPG7-207ENST00000563218 MT4P47944 62 aa4.91□□□□□ -1.62
SPG7-207ENST00000563218 HMCN1Q96RW7 5635 aa4.9□□□□□ -1.62
SPG7-207ENST00000563218 KRTAP4-7Q9BYR0 210 aa4.87□□□□□ -1.63
SPG7-207ENST00000563218 SPRR5A0A1B0GTR4 108 aa4.85□□□□□ -1.63
SPG7-207ENST00000563218 KRTAP5-7Q6L8G8 165 aa4.85□□□□□ -1.63
SPG7-207ENST00000563218 KRTAP12-3P60328 96 aa4.82□□□□□ -1.64
SPG7-207ENST00000563218 KRTAP19-5Q3LI72 72 aa4.82□□□□□ -1.64
SPG7-207ENST00000563218 KRTAP15-1Q3LI76 137 aa4.82□□□□□ -1.64
SPG7-207ENST00000563218 MT1GP13640 62 aa4.78□□□□□ -1.64
SPG7-207ENST00000563218 MT1MQ8N339 61 aa4.76□□□□□ -1.65
SPG7-207ENST00000563218 KRTAP4-3Q9BYR4 195 aa4.73□□□□□ -1.65
SPG7-207ENST00000563218 MT1LQ93083 61 aa4.71□□□□□ -1.66
SPG7-207ENST00000563218 KRTAP5-4Q6L8H1 288 aa4.7□□□□□ -1.66
SPG7-207ENST00000563218 KRTAP5-3Q6L8H2 238 aa4.7□□□□□ -1.66
SPG7-207ENST00000563218 KRTAP4-11Q9BYQ6 195 aa4.68□□□□□ -1.66
SPG7-207ENST00000563218 KRTAP4-2Q9BYR5 136 aa4.66□□□□□ -1.66
SPG7-207ENST00000563218 NDUFAF8A1L188 74 aa4.54□□□□□ -1.68
SPG7-207ENST00000563218 LUZP6Q538Z0 58 aa4.53□□□□□ -1.68
SPG7-207ENST00000563218 LCE3CQ5T5A8 94 aa4.49□□□□□ -1.69
SPG7-207ENST00000563218 KRTAP20-2Q3LI61 65 aa4.47□□□□□ -1.69
SPG7-207ENST00000563218 KRTAP5-5Q701N2 237 aaPredicted RBP4.4□□□□□ -1.71
SPG7-207ENST00000563218 KRTAP12-4P60329 112 aa4.27□□□□□ -1.73
SPG7-207ENST00000563218 SYNE1Q8NF91 8797 aaKnown RBP4.27□□□□□ -1.73
SPG7-207ENST00000563218 AHNAKQ09666 5890 aaKnown RBP4.26□□□□□ -1.73
SPG7-207ENST00000563218 KRTAP9-6A8MVA2 160 aa4.21□□□□□ -1.74
SPG7-207ENST00000563218 MUC5ACP98088 5654 aa4.21□□□□□ -1.74
SPG7-207ENST00000563218 A0A0A0MQY5 61 aa4.14□□□□□ -1.75
SPG7-207ENST00000563218 MUC5BQ9HC84 5762 aaPredicted RBP4.12□□□□□ -1.75
SPG7-207ENST00000563218 KRTAP5-8O75690 187 aa4.09□□□□□ -1.75
SPG7-207ENST00000563218 KRTAP5-2Q701N4 177 aa4.07□□□□□ -1.76
SPG7-207ENST00000563218 KRTAP6-1Q3LI64 71 aa4.02□□□□□ -1.77
SPG7-207ENST00000563218 MT1AP04731 61 aa3.98□□□□□ -1.77
SPG7-207ENST00000563218 KRTAP6-2Q3LI66 62 aa3.88□□□□□ -1.79
SPG7-207ENST00000563218 INE1O15225 51 aa3.85□□□□□ -1.79
SPG7-207ENST00000563218 OBSCNQ5VST9 7968 aa3.83□□□□□ -1.8
SPG7-207ENST00000563218 KRTAP5-1Q6L8H4 278 aa3.72□□□□□ -1.81
SPG7-207ENST00000563218 MT3P25713 68 aa3.61□□□□□ -1.83
SPG7-207ENST00000563218 LCE1EQ5T753 118 aa3.37□□□□□ -1.87
SPG7-207ENST00000563218 LCE3DQ9BYE3 92 aa3.37□□□□□ -1.87
SPG7-207ENST00000563218 LCE3EQ5T5B0 92 aa3.27□□□□□ -1.89
SPG7-207ENST00000563218 LCE1BQ5T7P3 118 aa3.27□□□□□ -1.89
SPG7-207ENST00000563218 KRTAP5-11Q6L8G4 156 aa3.17□□□□□ -1.9
SPG7-207ENST00000563218 LCE1CQ5T751 118 aa3.14□□□□□ -1.91
SPG7-207ENST00000563218 LCE1FQ5T754 118 aa3.09□□□□□ -1.91
SPG7-207ENST00000563218 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.06□□□□□ -1.92
SPG7-207ENST00000563218 PHGR1C9JFL3 82 aa2.97□□□□□ -1.93
SPG7-207ENST00000563218 PRM1P04553 51 aa2.84□□□□□ -1.95
SPG7-207ENST00000563218 KRTAP21-2Q3LI59 83 aa2.64□□□□□ -1.99
SPG7-207ENST00000563218 KRTAP4-4Q9BYR3 166 aa2.55□□□□□ -2
SPG7-207ENST00000563218 MUC19Q7Z5P9 8384 aa2.4□□□□□ -2.03
SPG7-207ENST00000563218 KRTAP21-1Q3LI58 79 aa2.25□□□□□ -2.05
SPG7-207ENST00000563218 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 11 ms