RNA–Protein interactions for RNA: ENST00000562875.5

KARS-203, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 3

Gene KARS, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-203ENST00000562875 HERC1Q15751 4861 aa3.3□□□□□ -1.88
KARS-203ENST00000562875 FLGP20930 4061 aaPredicted RBP3.3□□□□□ -1.88
KARS-203ENST00000562875 BIRC6Q9NR09 4857 aa3.3□□□□□ -1.88
KARS-203ENST00000562875 MT1HP80294 61 aa3.29□□□□□ -1.88
KARS-203ENST00000562875 SPRR5A0A1B0GTR4 108 aa3.27□□□□□ -1.89
KARS-203ENST00000562875 LCE3DQ9BYE3 92 aa3.26□□□□□ -1.89
KARS-203ENST00000562875 MT2AP02795 61 aa3.24□□□□□ -1.89
KARS-203ENST00000562875 HERC2O95714 4834 aa3.24□□□□□ -1.89
KARS-203ENST00000562875 KRTAP19-8Q3LI54 63 aa3.23□□□□□ -1.89
KARS-203ENST00000562875 MT1FP04733 61 aa3.22□□□□□ -1.89
KARS-203ENST00000562875 KRTAP5-2Q701N4 177 aa3.22□□□□□ -1.89
KARS-203ENST00000562875 PRO2289Q9P1D8 64 aa3.22□□□□□ -1.89
KARS-203ENST00000562875 KRTAP8-1Q8IUC2 63 aa3.18□□□□□ -1.9
KARS-203ENST00000562875 KRTAP12-3P60328 96 aa3.12□□□□□ -1.91
KARS-203ENST00000562875 KRTAP5-5Q701N2 237 aaPredicted RBP3.12□□□□□ -1.91
KARS-203ENST00000562875 MT1BP07438 61 aa3.11□□□□□ -1.91
KARS-203ENST00000562875 HMCN2Q8NDA2 5059 aa3.1□□□□□ -1.91
KARS-203ENST00000562875 MT1XP80297 61 aa3.1□□□□□ -1.91
KARS-203ENST00000562875 PCLOQ9Y6V0 5065 aa3.1□□□□□ -1.91
KARS-203ENST00000562875 INE1O15225 51 aa3.07□□□□□ -1.92
KARS-203ENST00000562875 MUC2Q02817 5179 aa3.06□□□□□ -1.92
KARS-203ENST00000562875 RNF213Q63HN8 5207 aa2.99□□□□□ -1.93
KARS-203ENST00000562875 KRTAP19-5Q3LI72 72 aa2.93□□□□□ -1.94
KARS-203ENST00000562875 LCE1CQ5T751 118 aa2.92□□□□□ -1.94
KARS-203ENST00000562875 LCE1BQ5T7P3 118 aa2.92□□□□□ -1.94
KARS-203ENST00000562875 FAT4Q6V0I7 4981 aa2.91□□□□□ -1.94
KARS-203ENST00000562875 UBR4Q5T4S7 5183 aa2.89□□□□□ -1.95
KARS-203ENST00000562875 KRTAP19-7Q3SYF9 63 aa2.74□□□□□ -1.97
KARS-203ENST00000562875 MT1LQ93083 61 aa2.72□□□□□ -1.97
KARS-203ENST00000562875 KRTAP5-8O75690 187 aa2.71□□□□□ -1.98
KARS-203ENST00000562875 MT1EP04732 61 aa2.71□□□□□ -1.98
KARS-203ENST00000562875 KRTAP2-3P0C7H8 128 aa2.69□□□□□ -1.98
KARS-203ENST00000562875 KRTAP2-4Q9BYR9 128 aa2.69□□□□□ -1.98
KARS-203ENST00000562875 KRTAP2-1Q9BYU5 128 aa2.69□□□□□ -1.98
KARS-203ENST00000562875 KRTAP19-6Q3LI70 58 aa2.68□□□□□ -1.98
KARS-203ENST00000562875 MT1GP13640 62 aa2.59□□□□□ -1.99
KARS-203ENST00000562875 KRTAP19-3Q7Z4W3 81 aa2.58□□□□□ -2
KARS-203ENST00000562875 USH2AO75445 5202 aa2.55□□□□□ -2
KARS-203ENST00000562875 MT1MQ8N339 61 aa2.55□□□□□ -2
KARS-203ENST00000562875 SSPOA2VEC9 5147 aa2.55□□□□□ -2
KARS-203ENST00000562875 KMT2DO14686 5537 aa2.51□□□□□ -2.01
KARS-203ENST00000562875 CRCT1Q9UGL9 99 aa2.48□□□□□ -2.01
KARS-203ENST00000562875 SPRR2FQ96RM1 72 aa2.47□□□□□ -2.01
KARS-203ENST00000562875 KRTAP6-3Q3LI67 103 aa2.46□□□□□ -2.02
KARS-203ENST00000562875 KRTAP5-7Q6L8G8 165 aa2.43□□□□□ -2.02
KARS-203ENST00000562875 KRTAP12-4P60329 112 aa2.4□□□□□ -2.03
KARS-203ENST00000562875 MT1AP04731 61 aa2.37□□□□□ -2.03
KARS-203ENST00000562875 MUC19Q7Z5P9 8384 aa2.31□□□□□ -2.04
KARS-203ENST00000562875 SPRR2EP22531 72 aa2.27□□□□□ -2.05
KARS-203ENST00000562875 SPRR2BP35325 72 aa2.27□□□□□ -2.05
KARS-203ENST00000562875 SPRR2AP35326 72 aa2.27□□□□□ -2.05
KARS-203ENST00000562875 KRTAP6-1Q3LI64 71 aa2.27□□□□□ -2.05
KARS-203ENST00000562875 FCGBPQ9Y6R7 5405 aaPredicted RBP2.27□□□□□ -2.05
KARS-203ENST00000562875 MUC12Q9UKN1 5478 aa2.2□□□□□ -2.06
KARS-203ENST00000562875 SPRR2DP22532 72 aa2.19□□□□□ -2.06
KARS-203ENST00000562875 FSIP2Q5CZC0 6907 aa2.16□□□□□ -2.06
KARS-203ENST00000562875 PRM1P04553 51 aa2.13□□□□□ -2.07
KARS-203ENST00000562875 MACF1Q9UPN3 7388 aaKnown RBP2.1□□□□□ -2.07
KARS-203ENST00000562875 SYNE1Q8NF91 8797 aaKnown RBP2.06□□□□□ -2.08
KARS-203ENST00000562875 KRTAP21-2Q3LI59 83 aa2.06□□□□□ -2.08
KARS-203ENST00000562875 KRTAP6-2Q3LI66 62 aa2.05□□□□□ -2.08
KARS-203ENST00000562875 DSTQ03001 7570 aaKnown RBP2.04□□□□□ -2.08
KARS-203ENST00000562875 SYNE2Q8WXH0 6885 aaKnown RBP1.95□□□□□ -2.1
KARS-203ENST00000562875 MDN1Q9NU22 5596 aa1.93□□□□□ -2.1
KARS-203ENST00000562875 MT4P47944 62 aa1.86□□□□□ -2.11
KARS-203ENST00000562875 KRTAP20-2Q3LI61 65 aa1.84□□□□□ -2.11
KARS-203ENST00000562875 KRTAP20-1Q3LI63 56 aa1.79□□□□□ -2.12
KARS-203ENST00000562875 NEBP20929 6669 aa1.7□□□□□ -2.14
KARS-203ENST00000562875 KRTAP5-10Q6L8G5 202 aa1.61□□□□□ -2.15
KARS-203ENST00000562875 MUC5ACP98088 5654 aa1.59□□□□□ -2.15
KARS-203ENST00000562875 HMCN1Q96RW7 5635 aa1.53□□□□□ -2.16
KARS-203ENST00000562875 KRTAP21-1Q3LI58 79 aa1.33□□□□□ -2.2
KARS-203ENST00000562875 MUC5BQ9HC84 5762 aaPredicted RBP1.22□□□□□ -2.21
KARS-203ENST00000562875 AHNAK2Q8IVF2 5795 aa1.22□□□□□ -2.21
KARS-203ENST00000562875 PHGR1C9JFL3 82 aa1.17□□□□□ -2.22
KARS-203ENST00000562875 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
KARS-203ENST00000562875 GPR98Q8WXG9 6306 aa1.15□□□□□ -2.23
KARS-203ENST00000562875 AHNAKQ09666 5890 aaKnown RBP0.91□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 86.5 ms