RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 TP53AIP1Q9HCN2 124 aa0.86□□□□□ -2.27
HDGFL3-202ENST00000562702 TMEM167BQ9NRX6 74 aa0.86□□□□□ -2.27
HDGFL3-202ENST00000562702 POLR2KP53803 58 aaKnown RBP0.85□□□□□ -2.27
HDGFL3-202ENST00000562702 RPL39P62891 51 aaKnown RBP0.85□□□□□ -2.27
HDGFL3-202ENST00000562702 DSTQ03001 7570 aaKnown RBP0.85□□□□□ -2.27
HDGFL3-202ENST00000562702 ETDCA0A1B0GVM5 59 aa0.84□□□□□ -2.27
HDGFL3-202ENST00000562702 PRLHP81277 87 aa0.84□□□□□ -2.27
HDGFL3-202ENST00000562702 NDUFA1O15239 70 aa0.83□□□□□ -2.28
HDGFL3-202ENST00000562702 Q8IZM0 81 aa0.83□□□□□ -2.28
HDGFL3-202ENST00000562702 KCNQ1DNQ9H478 68 aa0.83□□□□□ -2.28
HDGFL3-202ENST00000562702 SYNE2Q8WXH0 6885 aaKnown RBP0.83□□□□□ -2.28
HDGFL3-202ENST00000562702 C9orf92A6NGG3 77 aa0.82□□□□□ -2.28
HDGFL3-202ENST00000562702 M0R2T5 61 aa0.82□□□□□ -2.28
HDGFL3-202ENST00000562702 COX6B2Q6YFQ2 88 aa0.82□□□□□ -2.28
HDGFL3-202ENST00000562702 TOMM7Q9P0U1 55 aa0.82□□□□□ -2.28
HDGFL3-202ENST00000562702 CDKN2A-AS1Q9UH64 79 aa0.82□□□□□ -2.28
HDGFL3-202ENST00000562702 MT2AP02795 61 aa0.81□□□□□ -2.28
HDGFL3-202ENST00000562702 MT1FP04733 61 aa0.81□□□□□ -2.28
HDGFL3-202ENST00000562702 MRPL34Q9BQ48 92 aaKnown RBP0.81□□□□□ -2.28
HDGFL3-202ENST00000562702 SMIM2Q9BVW6 85 aa0.81□□□□□ -2.28
HDGFL3-202ENST00000562702 C10orf95Q9H7T3 257 aa0.81□□□□□ -2.28
HDGFL3-202ENST00000562702 NEBP20929 6669 aa0.81□□□□□ -2.28
HDGFL3-202ENST00000562702 MUC12Q9UKN1 5478 aa0.8□□□□□ -2.28
HDGFL3-202ENST00000562702 IGIPA6NJ69 53 aa0.8□□□□□ -2.28
HDGFL3-202ENST00000562702 H0YGX0 51 aa0.8□□□□□ -2.28
HDGFL3-202ENST00000562702 K7EQZ3 153 aa0.8□□□□□ -2.28
HDGFL3-202ENST00000562702 SMIM27A0A1W2PRY6 76 aa0.79□□□□□ -2.28
HDGFL3-202ENST00000562702 SPINK1P00995 79 aa0.78□□□□□ -2.28
HDGFL3-202ENST00000562702 SPRR1AP35321 89 aa0.78□□□□□ -2.28
HDGFL3-202ENST00000562702 KRTAP19-6Q3LI70 58 aa0.78□□□□□ -2.28
HDGFL3-202ENST00000562702 KMT2DO14686 5537 aa0.77□□□□□ -2.29
HDGFL3-202ENST00000562702 KRTAP20-1Q3LI63 56 aa0.77□□□□□ -2.29
HDGFL3-202ENST00000562702 LINC00158P58513 81 aa0.76□□□□□ -2.29
HDGFL3-202ENST00000562702 RPS29P62273 56 aaKnown RBP0.76□□□□□ -2.29
HDGFL3-202ENST00000562702 DEFB105AQ8NG35 78 aa0.76□□□□□ -2.29
HDGFL3-202ENST00000562702 MDN1Q9NU22 5596 aa0.75□□□□□ -2.29
HDGFL3-202ENST00000562702 LINC01546A6NGU7 62 aa0.75□□□□□ -2.29
HDGFL3-202ENST00000562702 SPRR1BP22528 89 aa0.74□□□□□ -2.29
HDGFL3-202ENST00000562702 MT1BP07438 61 aa0.73□□□□□ -2.29
HDGFL3-202ENST00000562702 KRTAP2-3P0C7H8 128 aa0.73□□□□□ -2.29
HDGFL3-202ENST00000562702 KRTAP2-4Q9BYR9 128 aa0.73□□□□□ -2.29
HDGFL3-202ENST00000562702 A0A0D9SG42 100 aa0.72□□□□□ -2.29
HDGFL3-202ENST00000562702 LINC00308Q8TCZ7 52 aa0.72□□□□□ -2.29
HDGFL3-202ENST00000562702 MUC5ACP98088 5654 aa0.72□□□□□ -2.29
HDGFL3-202ENST00000562702 IGLV5-48A0A075B6I7 105 aa0.71□□□□□ -2.3
HDGFL3-202ENST00000562702 H1FX-AS1Q4G0G2 97 aa0.71□□□□□ -2.3
HDGFL3-202ENST00000562702 WFDC13Q8IUB5 93 aa0.71□□□□□ -2.3
HDGFL3-202ENST00000562702 KRTAP2-1Q9BYU5 128 aa0.7□□□□□ -2.3
HDGFL3-202ENST00000562702 H0YAA0 97 aa0.69□□□□□ -2.3
HDGFL3-202ENST00000562702 SPRR2EP22531 72 aa0.69□□□□□ -2.3
HDGFL3-202ENST00000562702 SPRR2BP35325 72 aa0.69□□□□□ -2.3
HDGFL3-202ENST00000562702 SPRR2AP35326 72 aa0.69□□□□□ -2.3
HDGFL3-202ENST00000562702 SPRR2FQ96RM1 72 aa0.69□□□□□ -2.3
HDGFL3-202ENST00000562702 KRTAP19-8Q3LI54 63 aa0.68□□□□□ -2.3
HDGFL3-202ENST00000562702 SPRR2DP22532 72 aa0.67□□□□□ -2.3
HDGFL3-202ENST00000562702 SPRR2GQ9BYE4 73 aa0.66□□□□□ -2.3
HDGFL3-202ENST00000562702 MT1XP80297 61 aa0.65□□□□□ -2.31
HDGFL3-202ENST00000562702 KRTAP8-1Q8IUC2 63 aa0.65□□□□□ -2.31
HDGFL3-202ENST00000562702 MT4P47944 62 aa0.62□□□□□ -2.31
HDGFL3-202ENST00000562702 MMP24-AS1A0A0U1RRL7 71 aa0.61□□□□□ -2.31
HDGFL3-202ENST00000562702 S4R3F8 94 aa0.6□□□□□ -2.31
HDGFL3-202ENST00000562702 KRTAP19-7Q3SYF9 63 aa0.59□□□□□ -2.31
HDGFL3-202ENST00000562702 MT1EP04732 61 aa0.58□□□□□ -2.32
HDGFL3-202ENST00000562702 SYNE1Q8NF91 8797 aaKnown RBP0.58□□□□□ -2.32
HDGFL3-202ENST00000562702 KRTAP19-3Q7Z4W3 81 aa0.57□□□□□ -2.32
HDGFL3-202ENST00000562702 MT1MQ8N339 61 aa0.56□□□□□ -2.32
HDGFL3-202ENST00000562702 KRTAP20-2Q3LI61 65 aa0.55□□□□□ -2.32
HDGFL3-202ENST00000562702 KRTAP19-5Q3LI72 72 aa0.55□□□□□ -2.32
HDGFL3-202ENST00000562702 M0QZ58 72 aa0.54□□□□□ -2.32
HDGFL3-202ENST00000562702 MT1GP13640 62 aa0.54□□□□□ -2.32
HDGFL3-202ENST00000562702 MT1LQ93083 61 aa0.54□□□□□ -2.32
HDGFL3-202ENST00000562702 TNP1P09430 55 aa0.5□□□□□ -2.33
HDGFL3-202ENST00000562702 KRTAP6-1Q3LI64 71 aa0.47□□□□□ -2.33
HDGFL3-202ENST00000562702 KRTAP6-2Q3LI66 62 aa0.46□□□□□ -2.34
HDGFL3-202ENST00000562702 MT1AP04731 61 aa0.45□□□□□ -2.34
HDGFL3-202ENST00000562702 PRM1P04553 51 aa0.43□□□□□ -2.34
HDGFL3-202ENST00000562702 PHGR1C9JFL3 82 aa0.35□□□□□ -2.35
HDGFL3-202ENST00000562702 KRTAP21-1Q3LI58 79 aa0.33□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 622 ms